EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000021315 (Gene tree)
Gene ID: 109985761
Gene Symbol: gfm1
Alias: fc96f12|wu:fc96f12|zgc:154041
Full Name: G elongation factor mitochondrial 1
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 13305 bases
Position: chrFKLU01000086.1:523939-537243
Accession: 109985761
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000028155	GTP_EFTU	PF00009.27	3.2e-63	1	1
ENSLBEP00000028196	GTP_EFTU	PF00009.27	4.5e-60	1	1
ENSLBEP00000028155	GTP_EFTU_D2	PF03144.25	1.6e-16	1	1
ENSLBEP00000028196	GTP_EFTU_D2	PF03144.25	1.8e-16	1	1
ENSLBEP00000028155	EFG_IV	PF03764.18	6.5e-37	1	1
ENSLBEP00000028196	EFG_IV	PF03764.18	7.8e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000029488	-	5783	XM_020636159	ENSLBEP00000028155	687 (aa)	XP_020491815	-
ENSLBET00000029532	-	2076	-	ENSLBEP00000028196	691 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000021315's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000021315's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000021315	gfm1	98	33.838	ENSLBEG00000020327	gfm2	91	34.250
ENSLBEG00000021315	gfm1	79	38.194	ENSLBEG00000016853	-	73	38.194

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000021315	gfm1	100	79.915	ENSG00000168827	GFM1	100	93.333	Homo_sapiens
ENSLBEG00000021315	gfm1	99	88.218	ENSAPOG00000016489	gfm1	97	88.218	Acanthochromis_polyacanthus
ENSLBEG00000021315	gfm1	100	80.769	ENSAMEG00000013542	GFM1	93	80.769	Ailuropoda_melanoleuca
ENSLBEG00000021315	gfm1	100	85.470	ENSACIG00000014465	gfm1	91	85.470	Amphilophus_citrinellus
ENSLBEG00000021315	gfm1	100	88.588	ENSAOCG00000006023	gfm1	94	88.588	Amphiprion_ocellaris
ENSLBEG00000021315	gfm1	100	88.588	ENSAPEG00000024499	gfm1	97	88.160	Amphiprion_percula
ENSLBEG00000021315	gfm1	100	89.872	ENSATEG00000013789	gfm1	94	89.872	Anabas_testudineus
ENSLBEG00000021315	gfm1	100	79.487	ENSAPLG00000005022	GFM1	97	79.487	Anas_platyrhynchos
ENSLBEG00000021315	gfm1	100	80.029	ENSACAG00000006829	GFM1	95	80.029	Anolis_carolinensis
ENSLBEG00000021315	gfm1	100	79.772	ENSANAG00000035983	GFM1	93	79.772	Aotus_nancymaae
ENSLBEG00000021315	gfm1	100	91.298	ENSACLG00000016586	gfm1	96	89.474	Astatotilapia_calliptera
ENSLBEG00000021315	gfm1	100	87.732	ENSAMXG00000013435	gfm1	94	87.447	Astyanax_mexicanus
ENSLBEG00000021315	gfm1	100	80.599	ENSBTAG00000027795	GFM1	93	80.599	Bos_taurus
ENSLBEG00000021315	gfm1	98	56.522	WBGene00009246	gfm-1	92	56.522	Caenorhabditis_elegans
ENSLBEG00000021315	gfm1	100	80.199	ENSCJAG00000000363	GFM1	93	80.199	Callithrix_jacchus
ENSLBEG00000021315	gfm1	100	80.912	ENSCAFG00000009006	GFM1	100	80.473	Canis_familiaris
ENSLBEG00000021315	gfm1	100	80.912	ENSCAFG00020005878	GFM1	96	80.912	Canis_lupus_dingo
ENSLBEG00000021315	gfm1	100	80.742	ENSCHIG00000015220	GFM1	93	80.742	Capra_hircus
ENSLBEG00000021315	gfm1	100	80.199	ENSTSYG00000002013	GFM1	93	80.199	Carlito_syrichta
ENSLBEG00000021315	gfm1	100	69.873	ENSCAPG00000005699	GFM1	95	69.873	Cavia_aperea
ENSLBEG00000021315	gfm1	100	80.484	ENSCPOG00000001194	GFM1	93	80.484	Cavia_porcellus
ENSLBEG00000021315	gfm1	100	79.772	ENSCCAG00000025561	GFM1	93	79.772	Cebus_capucinus
ENSLBEG00000021315	gfm1	100	80.199	ENSCATG00000037622	GFM1	93	80.199	Cercocebus_atys
ENSLBEG00000021315	gfm1	100	79.915	ENSCLAG00000002503	GFM1	93	79.915	Chinchilla_lanigera
ENSLBEG00000021315	gfm1	100	80.057	ENSCSAG00000012162	GFM1	93	80.057	Chlorocebus_sabaeus
ENSLBEG00000021315	gfm1	100	71.083	ENSCHOG00000004867	GFM1	93	71.083	Choloepus_hoffmanni
ENSLBEG00000021315	gfm1	100	81.598	ENSCPBG00000018367	GFM1	94	81.598	Chrysemys_picta_bellii
ENSLBEG00000021315	gfm1	99	58.097	ENSCING00000011960	-	92	58.097	Ciona_intestinalis
ENSLBEG00000021315	gfm1	99	59.429	ENSCSAVG00000008514	-	98	58.106	Ciona_savignyi
ENSLBEG00000021315	gfm1	100	80.057	ENSCANG00000031714	GFM1	93	80.057	Colobus_angolensis_palliatus
ENSLBEG00000021315	gfm1	100	80.884	ENSCGRG00001022095	GFM1	93	80.884	Cricetulus_griseus_chok1gshd
ENSLBEG00000021315	gfm1	100	80.884	ENSCGRG00000012043	GFM1	93	80.884	Cricetulus_griseus_crigri
ENSLBEG00000021315	gfm1	100	82.571	ENSCSEG00000017088	gfm1	96	82.571	Cynoglossus_semilaevis
ENSLBEG00000021315	gfm1	100	92.154	ENSCVAG00000004126	gfm1	98	90.544	Cyprinodon_variegatus
ENSLBEG00000021315	gfm1	100	83.167	ENSDARG00000063624	gfm1	94	83.167	Danio_rerio
ENSLBEG00000021315	gfm1	58	77.017	ENSDNOG00000016385	-	100	77.017	Dasypus_novemcinctus
ENSLBEG00000021315	gfm1	100	78.490	ENSDORG00000014165	Gfm1	93	78.490	Dipodomys_ordii
ENSLBEG00000021315	gfm1	100	67.332	FBgn0263133	mEFG1	94	67.332	Drosophila_melanogaster
ENSLBEG00000021315	gfm1	100	73.011	ENSETEG00000019197	GFM1	93	73.011	Echinops_telfairi
ENSLBEG00000021315	gfm1	95	62.707	ENSEBUG00000012794	gfm1	99	62.707	Eptatretus_burgeri
ENSLBEG00000021315	gfm1	100	60.085	ENSEEUG00000000429	GFM1	97	60.085	Erinaceus_europaeus
ENSLBEG00000021315	gfm1	100	87.019	ENSELUG00000014728	gfm1	94	87.019	Esox_lucius
ENSLBEG00000021315	gfm1	100	80.627	ENSFCAG00000013291	GFM1	93	80.627	Felis_catus
ENSLBEG00000021315	gfm1	96	79.111	ENSFALG00000007619	GFM1	100	79.111	Ficedula_albicollis
ENSLBEG00000021315	gfm1	100	80.342	ENSFDAG00000016559	GFM1	93	80.342	Fukomys_damarensis
ENSLBEG00000021315	gfm1	100	91.583	ENSFHEG00000006091	gfm1	94	91.583	Fundulus_heteroclitus
ENSLBEG00000021315	gfm1	100	86.950	ENSGMOG00000010161	gfm1	97	86.950	Gadus_morhua
ENSLBEG00000021315	gfm1	100	79.601	ENSGALG00000009634	GFM1	95	79.601	Gallus_gallus
ENSLBEG00000021315	gfm1	100	90.870	ENSGAFG00000012527	gfm1	94	90.870	Gambusia_affinis
ENSLBEG00000021315	gfm1	100	91.311	ENSGACG00000009864	gfm1	94	91.311	Gasterosteus_aculeatus
ENSLBEG00000021315	gfm1	100	80.199	ENSGGOG00000003085	GFM1	93	80.199	Gorilla_gorilla
ENSLBEG00000021315	gfm1	100	91.583	ENSHBUG00000002120	gfm1	94	91.583	Haplochromis_burtoni
ENSLBEG00000021315	gfm1	100	79.345	ENSHGLG00000016855	GFM1	93	79.345	Heterocephalus_glaber_female
ENSLBEG00000021315	gfm1	100	79.345	ENSHGLG00100013049	GFM1	93	79.345	Heterocephalus_glaber_male
ENSLBEG00000021315	gfm1	100	90.157	ENSHCOG00000007638	gfm1	99	89.286	Hippocampus_comes
ENSLBEG00000021315	gfm1	100	85.877	ENSIPUG00000005873	gfm1	94	85.877	Ictalurus_punctatus
ENSLBEG00000021315	gfm1	100	78.775	ENSSTOG00000010150	GFM1	95	78.775	Ictidomys_tridecemlineatus
ENSLBEG00000021315	gfm1	100	79.743	ENSJJAG00000016447	Gfm1	93	79.743	Jaculus_jaculus
ENSLBEG00000021315	gfm1	100	86.876	ENSKMAG00000020768	gfm1	94	86.876	Kryptolebias_marmoratus
ENSLBEG00000021315	gfm1	100	81.027	ENSLACG00000012295	GFM1	95	81.027	Latimeria_chalumnae
ENSLBEG00000021315	gfm1	100	79.716	ENSLOCG00000003778	gfm1	96	79.716	Lepisosteus_oculatus
ENSLBEG00000021315	gfm1	100	78.490	ENSLAFG00000010945	GFM1	97	77.208	Loxodonta_africana
ENSLBEG00000021315	gfm1	100	80.057	ENSMFAG00000035731	GFM1	93	80.057	Macaca_fascicularis
ENSLBEG00000021315	gfm1	100	80.057	ENSMMUG00000004961	GFM1	93	80.057	Macaca_mulatta
ENSLBEG00000021315	gfm1	100	79.915	ENSMNEG00000033245	GFM1	93	79.915	Macaca_nemestrina
ENSLBEG00000021315	gfm1	100	78.063	ENSMLEG00000030908	GFM1	97	77.809	Mandrillus_leucophaeus
ENSLBEG00000021315	gfm1	100	89.872	ENSMAMG00000011760	gfm1	94	89.872	Mastacembelus_armatus
ENSLBEG00000021315	gfm1	100	91.441	ENSMZEG00005016639	gfm1	94	91.441	Maylandia_zebra
ENSLBEG00000021315	gfm1	100	79.886	ENSMGAG00000010641	GFM1	94	79.886	Meleagris_gallopavo
ENSLBEG00000021315	gfm1	100	80.884	ENSMAUG00000000611	Gfm1	93	80.884	Mesocricetus_auratus
ENSLBEG00000021315	gfm1	100	80.342	ENSMICG00000049086	GFM1	93	80.342	Microcebus_murinus
ENSLBEG00000021315	gfm1	100	80.742	ENSMOCG00000000465	Gfm1	93	80.742	Microtus_ochrogaster
ENSLBEG00000021315	gfm1	100	90.870	ENSMMOG00000012538	gfm1	95	90.870	Mola_mola
ENSLBEG00000021315	gfm1	100	80.884	ENSMODG00000015673	GFM1	94	80.884	Monodelphis_domestica
ENSLBEG00000021315	gfm1	100	87.874	ENSMALG00000012508	gfm1	93	87.874	Monopterus_albus
ENSLBEG00000021315	gfm1	100	81.027	MGP_CAROLIEiJ_G0025052	Gfm1	99	78.987	Mus_caroli
ENSLBEG00000021315	gfm1	100	80.884	ENSMUSG00000027774	Gfm1	93	80.884	Mus_musculus
ENSLBEG00000021315	gfm1	100	80.742	MGP_PahariEiJ_G0026495	Gfm1	99	78.612	Mus_pahari
ENSLBEG00000021315	gfm1	100	80.884	MGP_SPRETEiJ_G0025994	Gfm1	99	78.612	Mus_spretus
ENSLBEG00000021315	gfm1	100	81.054	ENSMPUG00000002859	GFM1	93	81.054	Mustela_putorius_furo
ENSLBEG00000021315	gfm1	100	80.627	ENSMLUG00000000452	GFM1	93	80.627	Myotis_lucifugus
ENSLBEG00000021315	gfm1	100	80.456	ENSNGAG00000012375	Gfm1	93	80.456	Nannospalax_galili
ENSLBEG00000021315	gfm1	100	91.155	ENSNBRG00000004631	gfm1	96	91.155	Neolamprologus_brichardi
ENSLBEG00000021315	gfm1	100	80.199	ENSNLEG00000004176	GFM1	93	80.199	Nomascus_leucogenys
ENSLBEG00000021315	gfm1	95	72.197	ENSMEUG00000007784	GFM1	97	71.299	Notamacropus_eugenii
ENSLBEG00000021315	gfm1	100	79.345	ENSOPRG00000009860	GFM1	95	79.345	Ochotona_princeps
ENSLBEG00000021315	gfm1	100	80.912	ENSODEG00000004316	GFM1	93	80.912	Octodon_degus
ENSLBEG00000021315	gfm1	100	91.726	ENSONIG00000003772	gfm1	94	91.726	Oreochromis_niloticus
ENSLBEG00000021315	gfm1	100	80.912	ENSOCUG00000013561	GFM1	93	80.912	Oryctolagus_cuniculus
ENSLBEG00000021315	gfm1	100	90.442	ENSORLG00000006487	gfm1	99	90.442	Oryzias_latipes
ENSLBEG00000021315	gfm1	100	90.157	ENSORLG00020003362	gfm1	94	90.157	Oryzias_latipes_hni
ENSLBEG00000021315	gfm1	100	90.300	ENSORLG00015005829	gfm1	94	90.300	Oryzias_latipes_hsok
ENSLBEG00000021315	gfm1	100	91.013	ENSOMEG00000012894	gfm1	94	91.013	Oryzias_melastigma
ENSLBEG00000021315	gfm1	100	79.630	ENSOGAG00000008298	GFM1	93	79.630	Otolemur_garnettii
ENSLBEG00000021315	gfm1	100	79.972	ENSOARG00000002409	GFM1	97	79.972	Ovis_aries
ENSLBEG00000021315	gfm1	100	80.199	ENSPPAG00000033881	GFM1	93	80.199	Pan_paniscus
ENSLBEG00000021315	gfm1	100	80.627	ENSPPRG00000009281	GFM1	93	80.627	Panthera_pardus
ENSLBEG00000021315	gfm1	100	80.484	ENSPTIG00000012416	GFM1	93	80.484	Panthera_tigris_altaica
ENSLBEG00000021315	gfm1	100	80.199	ENSPTRG00000015570	GFM1	93	80.199	Pan_troglodytes
ENSLBEG00000021315	gfm1	100	80.057	ENSPANG00000016512	GFM1	93	80.057	Papio_anubis
ENSLBEG00000021315	gfm1	100	84.165	ENSPKIG00000004876	gfm1	94	84.165	Paramormyrops_kingsleyae
ENSLBEG00000021315	gfm1	100	81.740	ENSPSIG00000012567	GFM1	94	81.740	Pelodiscus_sinensis
ENSLBEG00000021315	gfm1	100	87.767	ENSPMGG00000014068	gfm1	97	87.767	Periophthalmus_magnuspinnatus
ENSLBEG00000021315	gfm1	100	80.742	ENSPEMG00000008942	Gfm1	93	80.742	Peromyscus_maniculatus_bairdii
ENSLBEG00000021315	gfm1	94	77.984	ENSPCIG00000020195	GFM1	94	81.653	Phascolarctos_cinereus
ENSLBEG00000021315	gfm1	100	91.441	ENSPFOG00000011022	gfm1	94	91.441	Poecilia_formosa
ENSLBEG00000021315	gfm1	100	91.441	ENSPLAG00000019585	gfm1	95	91.753	Poecilia_latipinna
ENSLBEG00000021315	gfm1	100	91.298	ENSPMEG00000012376	gfm1	94	91.298	Poecilia_mexicana
ENSLBEG00000021315	gfm1	100	91.298	ENSPREG00000001332	gfm1	89	91.298	Poecilia_reticulata
ENSLBEG00000021315	gfm1	100	80.057	ENSPPYG00000014244	GFM1	93	80.057	Pongo_abelii
ENSLBEG00000021315	gfm1	100	78.205	ENSPCAG00000008934	GFM1	99	78.205	Procavia_capensis
ENSLBEG00000021315	gfm1	100	80.342	ENSPCOG00000022259	GFM1	93	80.342	Propithecus_coquereli
ENSLBEG00000021315	gfm1	100	79.630	ENSPVAG00000013605	GFM1	93	79.630	Pteropus_vampyrus
ENSLBEG00000021315	gfm1	100	91.155	ENSPNYG00000006037	gfm1	95	91.155	Pundamilia_nyererei
ENSLBEG00000021315	gfm1	100	86.876	ENSPNAG00000001237	gfm1	94	86.876	Pygocentrus_nattereri
ENSLBEG00000021315	gfm1	100	80.599	ENSRNOG00000012873	Gfm1	93	80.599	Rattus_norvegicus
ENSLBEG00000021315	gfm1	100	80.057	ENSRBIG00000031363	GFM1	93	80.057	Rhinopithecus_bieti
ENSLBEG00000021315	gfm1	100	80.199	ENSRROG00000031081	GFM1	93	80.199	Rhinopithecus_roxellana
ENSLBEG00000021315	gfm1	98	55.878	YLR069C	-	89	55.878	Saccharomyces_cerevisiae
ENSLBEG00000021315	gfm1	100	79.915	ENSSBOG00000023252	GFM1	93	79.915	Saimiri_boliviensis_boliviensis
ENSLBEG00000021315	gfm1	100	81.312	ENSSHAG00000017772	GFM1	94	81.312	Sarcophilus_harrisii
ENSLBEG00000021315	gfm1	100	84.165	ENSSFOG00015003117	gfm1	97	83.949	Scleropages_formosus
ENSLBEG00000021315	gfm1	100	89.444	ENSSMAG00000013221	gfm1	94	89.444	Scophthalmus_maximus
ENSLBEG00000021315	gfm1	100	90.870	ENSSDUG00000018665	gfm1	94	90.870	Seriola_dumerili
ENSLBEG00000021315	gfm1	100	90.728	ENSSLDG00000020606	gfm1	94	90.728	Seriola_lalandi_dorsalis
ENSLBEG00000021315	gfm1	100	78.459	ENSSPUG00000018686	GFM1	95	78.459	Sphenodon_punctatus
ENSLBEG00000021315	gfm1	100	90.585	ENSSPAG00000008800	gfm1	94	90.585	Stegastes_partitus
ENSLBEG00000021315	gfm1	100	79.886	ENSSSCG00000025651	GFM1	93	79.886	Sus_scrofa
ENSLBEG00000021315	gfm1	100	87.304	ENSTRUG00000009244	gfm1	94	87.304	Takifugu_rubripes
ENSLBEG00000021315	gfm1	100	90.300	ENSTNIG00000007729	gfm1	94	90.300	Tetraodon_nigroviridis
ENSLBEG00000021315	gfm1	96	71.704	ENSTBEG00000017404	GFM1	89	71.704	Tupaia_belangeri
ENSLBEG00000021315	gfm1	100	80.314	ENSTTRG00000001735	GFM1	93	80.314	Tursiops_truncatus
ENSLBEG00000021315	gfm1	100	80.627	ENSUAMG00000026381	GFM1	93	80.627	Ursus_americanus
ENSLBEG00000021315	gfm1	100	80.627	ENSUMAG00000011268	GFM1	93	80.627	Ursus_maritimus
ENSLBEG00000021315	gfm1	100	77.033	ENSVPAG00000009444	GFM1	93	77.033	Vicugna_pacos
ENSLBEG00000021315	gfm1	100	80.627	ENSVVUG00000020091	GFM1	100	80.178	Vulpes_vulpes
ENSLBEG00000021315	gfm1	100	82.739	ENSXETG00000032551	GFM1	93	82.739	Xenopus_tropicalis
ENSLBEG00000021315	gfm1	59	88.337	ENSXCOG00000012590	gfm1	93	88.337	Xiphophorus_couchianus
ENSLBEG00000021315	gfm1	100	91.155	ENSXMAG00000000261	gfm1	94	91.155	Xiphophorus_maculatus