EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000021334 (Gene tree)
Gene ID: 109998881
Gene Symbol: si:dkey-37o8.1
Alias: fi12b10|wu:fi12b10
Full Name: elongation factor 1-alpha-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 2917 bases
Position: chrFKLU01000517.1:57092-60008
Accession: 109998881
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000028164	GTP_EFTU	PF00009.27	1.6e-54	1	1
ENSLBEP00000028164	MMR_HSR1	PF01926.23	2.4e-07	1	1
ENSLBEP00000028164	GTP_EFTU_D2	PF03144.25	2.6e-12	1	1
ENSLBEP00000028164	GTP_EFTU_D3	PF03143.17	8.3e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000029497	-	2329	XM_020653802	ENSLBEP00000028164	503 (aa)	XP_020509458	-

Gene Model

Click here to download ENSLBEG00000021334's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000021334's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000021334	si:dkey-37o8.1	88	37.472	ENSLBEG00000001128	GSPT1	76	37.472
ENSLBEG00000021334	si:dkey-37o8.1	80	70.343	ENSLBEG00000002790	eef1a1l1	99	70.343
ENSLBEG00000021334	si:dkey-37o8.1	89	67.706	ENSLBEG00000002955	-	98	67.706
ENSLBEG00000021334	si:dkey-37o8.1	88	36.996	ENSLBEG00000006458	gspt1l	75	36.996
ENSLBEG00000021334	si:dkey-37o8.1	90	59.013	ENSLBEG00000007846	eef1a1b	99	59.013
ENSLBEG00000021334	si:dkey-37o8.1	88	30.222	ENSLBEG00000023735	tufm	91	30.222
ENSLBEG00000021334	si:dkey-37o8.1	90	71.053	ENSLBEG00000008936	-	99	71.053
ENSLBEG00000021334	si:dkey-37o8.1	89	70.156	ENSLBEG00000002759	-	97	70.156
ENSLBEG00000021334	si:dkey-37o8.1	87	38.269	ENSLBEG00000002784	hbs1l	69	38.621

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000021334	si:dkey-37o8.1	90	93.187	ENSAPOG00000016459	si:dkey-37o8.1	100	93.187	Acanthochromis_polyacanthus
ENSLBEG00000021334	si:dkey-37o8.1	87	90.909	ENSACIG00000020985	si:dkey-37o8.1	82	90.909	Amphilophus_citrinellus
ENSLBEG00000021334	si:dkey-37o8.1	90	93.654	ENSAOCG00000002663	si:dkey-37o8.1	100	93.654	Amphiprion_ocellaris
ENSLBEG00000021334	si:dkey-37o8.1	90	93.654	ENSAPEG00000012670	si:dkey-37o8.1	100	93.654	Amphiprion_percula
ENSLBEG00000021334	si:dkey-37o8.1	84	95.024	ENSATEG00000002217	si:dkey-37o8.1	99	95.024	Anabas_testudineus
ENSLBEG00000021334	si:dkey-37o8.1	90	91.667	ENSACLG00000003519	si:dkey-37o8.1	100	91.667	Astatotilapia_calliptera
ENSLBEG00000021334	si:dkey-37o8.1	90	84.934	ENSAMXG00000002728	si:dkey-37o8.1	100	84.934	Astyanax_mexicanus
ENSLBEG00000021334	si:dkey-37o8.1	87	74.487	ENSCPBG00000020570	-	87	74.487	Chrysemys_picta_bellii
ENSLBEG00000021334	si:dkey-37o8.1	90	85.590	ENSCSEG00000019807	si:dkey-37o8.1	100	84.881	Cynoglossus_semilaevis
ENSLBEG00000021334	si:dkey-37o8.1	90	89.135	ENSCVAG00000009828	si:dkey-37o8.1	99	89.135	Cyprinodon_variegatus
ENSLBEG00000021334	si:dkey-37o8.1	90	82.751	ENSDARG00000071727	si:dkey-37o8.1	95	82.751	Danio_rerio
ENSLBEG00000021334	si:dkey-37o8.1	90	84.279	ENSELUG00000007495	si:dkey-37o8.1	100	84.279	Esox_lucius
ENSLBEG00000021334	si:dkey-37o8.1	90	88.987	ENSFHEG00000017452	si:dkey-37o8.1	99	88.987	Fundulus_heteroclitus
ENSLBEG00000021334	si:dkey-37o8.1	90	81.938	ENSGMOG00000006122	si:dkey-37o8.1	100	81.938	Gadus_morhua
ENSLBEG00000021334	si:dkey-37o8.1	89	83.036	ENSGAFG00000000367	si:dkey-37o8.1	99	83.036	Gambusia_affinis
ENSLBEG00000021334	si:dkey-37o8.1	90	91.850	ENSGACG00000004505	si:dkey-37o8.1	100	91.685	Gasterosteus_aculeatus
ENSLBEG00000021334	si:dkey-37o8.1	89	74.000	ENSGAGG00000007724	-	96	77.885	Gopherus_agassizii
ENSLBEG00000021334	si:dkey-37o8.1	90	91.447	ENSHBUG00000015515	si:dkey-37o8.1	100	91.447	Haplochromis_burtoni
ENSLBEG00000021334	si:dkey-37o8.1	90	80.931	ENSHCOG00000001215	si:dkey-37o8.1	100	80.931	Hippocampus_comes
ENSLBEG00000021334	si:dkey-37o8.1	90	83.186	ENSIPUG00000004067	si:dkey-37o8.1	99	83.186	Ictalurus_punctatus
ENSLBEG00000021334	si:dkey-37o8.1	90	89.059	ENSKMAG00000015910	si:dkey-37o8.1	100	89.059	Kryptolebias_marmoratus
ENSLBEG00000021334	si:dkey-37o8.1	90	76.211	ENSLACG00000003948	si:dkey-37o8.1	99	76.211	Latimeria_chalumnae
ENSLBEG00000021334	si:dkey-37o8.1	90	80.837	ENSLOCG00000011245	si:dkey-37o8.1	99	80.837	Lepisosteus_oculatus
ENSLBEG00000021334	si:dkey-37o8.1	90	75.330	ENSMAMG00000009907	si:dkey-37o8.1	95	75.330	Mastacembelus_armatus
ENSLBEG00000021334	si:dkey-37o8.1	90	91.667	ENSMZEG00005018358	si:dkey-37o8.1	100	91.667	Maylandia_zebra
ENSLBEG00000021334	si:dkey-37o8.1	90	92.511	ENSMMOG00000004111	si:dkey-37o8.1	99	92.511	Mola_mola
ENSLBEG00000021334	si:dkey-37o8.1	87	81.735	ENSMALG00000017152	si:dkey-37o8.1	99	81.735	Monopterus_albus
ENSLBEG00000021334	si:dkey-37o8.1	90	91.667	ENSNBRG00000013552	si:dkey-37o8.1	100	91.667	Neolamprologus_brichardi
ENSLBEG00000021334	si:dkey-37o8.1	90	91.228	ENSONIG00000006165	si:dkey-37o8.1	100	91.228	Oreochromis_niloticus
ENSLBEG00000021334	si:dkey-37o8.1	90	90.132	ENSORLG00000019066	si:dkey-37o8.1	100	90.132	Oryzias_latipes
ENSLBEG00000021334	si:dkey-37o8.1	90	90.132	ENSORLG00020008094	si:dkey-37o8.1	100	90.132	Oryzias_latipes_hni
ENSLBEG00000021334	si:dkey-37o8.1	90	90.351	ENSORLG00015008410	si:dkey-37o8.1	100	90.351	Oryzias_latipes_hsok
ENSLBEG00000021334	si:dkey-37o8.1	90	90.789	ENSOMEG00000001868	si:dkey-37o8.1	100	90.789	Oryzias_melastigma
ENSLBEG00000021334	si:dkey-37o8.1	90	83.442	ENSPKIG00000017246	si:dkey-37o8.1	100	83.442	Paramormyrops_kingsleyae
ENSLBEG00000021334	si:dkey-37o8.1	53	67.148	ENSPSIG00000008080	-	98	67.148	Pelodiscus_sinensis
ENSLBEG00000021334	si:dkey-37o8.1	90	89.800	ENSPFOG00000013173	si:dkey-37o8.1	99	89.800	Poecilia_formosa
ENSLBEG00000021334	si:dkey-37o8.1	90	88.470	ENSPLAG00000010405	si:dkey-37o8.1	99	88.470	Poecilia_latipinna
ENSLBEG00000021334	si:dkey-37o8.1	90	90.244	ENSPMEG00000015233	si:dkey-37o8.1	99	90.244	Poecilia_mexicana
ENSLBEG00000021334	si:dkey-37o8.1	89	89.955	ENSPREG00000006280	si:dkey-37o8.1	99	89.955	Poecilia_reticulata
ENSLBEG00000021334	si:dkey-37o8.1	90	91.009	ENSPNYG00000002059	si:dkey-37o8.1	100	91.009	Pundamilia_nyererei
ENSLBEG00000021334	si:dkey-37o8.1	89	85.235	ENSPNAG00000009990	si:dkey-37o8.1	100	84.061	Pygocentrus_nattereri
ENSLBEG00000021334	si:dkey-37o8.1	88	83.070	ENSSFOG00015019070	si:dkey-37o8.1	97	83.070	Scleropages_formosus
ENSLBEG00000021334	si:dkey-37o8.1	90	94.737	ENSSMAG00000016143	si:dkey-37o8.1	100	94.737	Scophthalmus_maximus
ENSLBEG00000021334	si:dkey-37o8.1	90	94.311	ENSSDUG00000009163	si:dkey-37o8.1	100	94.311	Seriola_dumerili
ENSLBEG00000021334	si:dkey-37o8.1	90	94.092	ENSSLDG00000023761	si:dkey-37o8.1	100	94.092	Seriola_lalandi_dorsalis
ENSLBEG00000021334	si:dkey-37o8.1	90	71.366	ENSSPUG00000007467	-	98	71.619	Sphenodon_punctatus
ENSLBEG00000021334	si:dkey-37o8.1	90	93.792	ENSSPAG00000013856	si:dkey-37o8.1	99	93.792	Stegastes_partitus
ENSLBEG00000021334	si:dkey-37o8.1	88	93.258	ENSTRUG00000009006	si:dkey-37o8.1	99	93.258	Takifugu_rubripes
ENSLBEG00000021334	si:dkey-37o8.1	89	92.188	ENSTNIG00000017138	si:dkey-37o8.1	97	92.188	Tetraodon_nigroviridis
ENSLBEG00000021334	si:dkey-37o8.1	87	76.993	ENSXETG00000017744	42Sp50	95	76.993	Xenopus_tropicalis
ENSLBEG00000021334	si:dkey-37o8.1	89	89.732	ENSXCOG00000012296	si:dkey-37o8.1	97	92.308	Xiphophorus_couchianus
ENSLBEG00000021334	si:dkey-37o8.1	90	89.800	ENSXMAG00000001998	si:dkey-37o8.1	99	89.800	Xiphophorus_maculatus