EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000021417 (Gene tree)
Gene ID: -
Gene Symbol: RRP1
Alias: D21S2056E|NNP-1|Nop52|RRP1A
Full Name: ribosomal RNA processing 1
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 13183 bases
Position: chrFKLU01000079.1:382768-395950
Accession: 18785
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000028271	Nop52	PF05997.12	3.3e-62	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000029612	RRP1-201	1194	-	ENSLBEP00000028271	397 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000021417's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000021417's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000021417	RRP1	89	47.059	ENSG00000160214	RRP1	80	61.111	Homo_sapiens
ENSLBEG00000021417	RRP1	97	46.667	ENSAMEG00000011448	RRP1	75	48.045	Ailuropoda_melanoleuca
ENSLBEG00000021417	RRP1	77	61.238	ENSACIG00000019121	rrp1	59	60.586	Amphilophus_citrinellus
ENSLBEG00000021417	RRP1	99	65.657	ENSAOCG00000017894	-	83	64.141	Amphiprion_ocellaris
ENSLBEG00000021417	RRP1	86	46.087	ENSANAG00000037815	RRP1	75	46.243	Aotus_nancymaae
ENSLBEG00000021417	RRP1	93	44.974	ENSBTAG00000003981	RRP1	75	45.706	Bos_taurus
ENSLBEG00000021417	RRP1	58	31.915	WBGene00008151	C47E12.7	57	31.915	Caenorhabditis_elegans
ENSLBEG00000021417	RRP1	89	47.753	ENSCJAG00000043205	RRP1	70	46.779	Callithrix_jacchus
ENSLBEG00000021417	RRP1	93	47.733	ENSCAFG00000010646	RRP1	75	47.191	Canis_familiaris
ENSLBEG00000021417	RRP1	93	47.733	ENSCAFG00020018979	RRP1	75	47.191	Canis_lupus_dingo
ENSLBEG00000021417	RRP1	93	45.989	ENSCHIG00000020948	RRP1	76	45.787	Capra_hircus
ENSLBEG00000021417	RRP1	99	41.627	ENSTSYG00000012831	RRP1	77	44.205	Carlito_syrichta
ENSLBEG00000021417	RRP1	78	40.828	ENSCAPG00000008576	RRP1	81	42.284	Cavia_aperea
ENSLBEG00000021417	RRP1	89	44.944	ENSCPOG00000038986	RRP1	75	44.538	Cavia_porcellus
ENSLBEG00000021417	RRP1	93	44.297	ENSCCAG00000029384	RRP1B	53	42.779	Cebus_capucinus
ENSLBEG00000021417	RRP1	89	46.779	ENSCCAG00000029828	RRP1	74	46.133	Cebus_capucinus
ENSLBEG00000021417	RRP1	89	46.779	ENSCATG00000015632	RRP1	74	46.369	Cercocebus_atys
ENSLBEG00000021417	RRP1	94	46.400	ENSCLAG00000011639	RRP1	75	45.938	Chinchilla_lanigera
ENSLBEG00000021417	RRP1	84	46.921	ENSCSAG00000007936	RRP1	97	46.903	Chlorocebus_sabaeus
ENSLBEG00000021417	RRP1	86	38.416	ENSCHOG00000002426	-	53	36.765	Choloepus_hoffmanni
ENSLBEG00000021417	RRP1	79	43.568	ENSCING00000003304	-	75	43.154	Ciona_intestinalis
ENSLBEG00000021417	RRP1	75	45.395	ENSCANG00000042611	RRP1	70	44.444	Colobus_angolensis_palliatus
ENSLBEG00000021417	RRP1	91	39.782	ENSCGRG00001023882	-	55	63.492	Cricetulus_griseus_chok1gshd
ENSLBEG00000021417	RRP1	89	49.300	ENSCGRG00001011920	Rrp1	77	47.207	Cricetulus_griseus_chok1gshd
ENSLBEG00000021417	RRP1	89	49.300	ENSCGRG00000008915	Rrp1	77	47.207	Cricetulus_griseus_crigri
ENSLBEG00000021417	RRP1	97	64.962	ENSCSEG00000020711	-	66	64.228	Cynoglossus_semilaevis
ENSLBEG00000021417	RRP1	93	65.499	ENSCVAG00000017568	-	89	66.027	Cyprinodon_variegatus
ENSLBEG00000021417	RRP1	99	42.512	ENSDNOG00000019880	RRP1	75	44.538	Dasypus_novemcinctus
ENSLBEG00000021417	RRP1	79	43.030	ENSDORG00000002104	Rrp1	75	42.424	Dipodomys_ordii
ENSLBEG00000021417	RRP1	98	43.257	ENSEASG00005001673	RRP1	77	44.258	Equus_asinus_asinus
ENSLBEG00000021417	RRP1	98	43.257	ENSECAG00000015703	RRP1	77	44.538	Equus_caballus
ENSLBEG00000021417	RRP1	99	66.585	ENSELUG00000015885	-	92	59.384	Esox_lucius
ENSLBEG00000021417	RRP1	93	48.011	ENSFCAG00000008434	RRP1	75	47.753	Felis_catus
ENSLBEG00000021417	RRP1	99	43.317	ENSFDAG00000013728	RRP1	74	43.850	Fukomys_damarensis
ENSLBEG00000021417	RRP1	93	63.904	ENSGMOG00000001953	-	51	63.587	Gadus_morhua
ENSLBEG00000021417	RRP1	99	65.152	ENSGACG00000001438	rrp1	54	66.848	Gasterosteus_aculeatus
ENSLBEG00000021417	RRP1	89	47.339	ENSGGOG00000000173	RRP1	74	47.486	Gorilla_gorilla
ENSLBEG00000021417	RRP1	88	47.458	ENSHGLG00000017085	RRP1	71	45.915	Heterocephalus_glaber_female
ENSLBEG00000021417	RRP1	94	41.114	ENSHGLG00000004968	RRP1B	51	39.889	Heterocephalus_glaber_female
ENSLBEG00000021417	RRP1	90	54.348	ENSIPUG00000000673	-	70	54.178	Ictalurus_punctatus
ENSLBEG00000021417	RRP1	97	43.687	ENSSTOG00000011116	RRP1	77	44.904	Ictidomys_tridecemlineatus
ENSLBEG00000021417	RRP1	89	46.629	ENSJJAG00000018886	Rrp1	76	46.218	Jaculus_jaculus
ENSLBEG00000021417	RRP1	99	64.987	ENSKMAG00000005539	rrp1	54	66.125	Kryptolebias_marmoratus
ENSLBEG00000021417	RRP1	94	43.617	ENSLAFG00000000766	RRP1B	82	42.659	Loxodonta_africana
ENSLBEG00000021417	RRP1	93	44.533	ENSLAFG00000022901	RRP1	78	45.658	Loxodonta_africana
ENSLBEG00000021417	RRP1	89	47.619	ENSMFAG00000003202	RRP1	74	46.648	Macaca_fascicularis
ENSLBEG00000021417	RRP1	89	47.339	ENSMMUG00000012304	RRP1	74	46.369	Macaca_mulatta
ENSLBEG00000021417	RRP1	89	47.899	ENSMNEG00000031210	RRP1	74	46.927	Macaca_nemestrina
ENSLBEG00000021417	RRP1	81	46.012	ENSMLEG00000037797	RRP1	73	44.954	Mandrillus_leucophaeus
ENSLBEG00000021417	RRP1	89	41.504	ENSMAUG00000017653	Rrp1	74	42.297	Mesocricetus_auratus
ENSLBEG00000021417	RRP1	89	47.191	ENSMICG00000004700	RRP1	78	47.472	Microcebus_murinus
ENSLBEG00000021417	RRP1	99	38.341	ENSMOCG00000015687	Rrp1	77	50.000	Microtus_ochrogaster
ENSLBEG00000021417	RRP1	94	64.611	ENSMMOG00000019175	rrp1	90	62.740	Mola_mola
ENSLBEG00000021417	RRP1	88	45.198	ENSMODG00000021036	-	50	44.602	Monodelphis_domestica
ENSLBEG00000021417	RRP1	99	70.202	ENSMALG00000010310	rrp1	91	69.837	Monopterus_albus
ENSLBEG00000021417	RRP1	99	40.476	MGP_CAROLIEiJ_G0015508	Rrp1	62	60.000	Mus_caroli
ENSLBEG00000021417	RRP1	99	37.280	MGP_CAROLIEiJ_G0021376	Rrp1b	53	60.317	Mus_caroli
ENSLBEG00000021417	RRP1	86	39.017	ENSMUSG00000058392	Rrp1b	53	61.905	Mus_musculus
ENSLBEG00000021417	RRP1	91	38.147	MGP_PahariEiJ_G0023695	Rrp1b	53	60.317	Mus_pahari
ENSLBEG00000021417	RRP1	99	38.287	MGP_SPRETEiJ_G0022290	Rrp1b	53	61.905	Mus_spretus
ENSLBEG00000021417	RRP1	93	44.146	ENSMPUG00000009826	RRP1	82	42.857	Mustela_putorius_furo
ENSLBEG00000021417	RRP1	78	52.941	ENSMLUG00000017788	RRP1	60	60.656	Myotis_lucifugus
ENSLBEG00000021417	RRP1	89	38.987	ENSNGAG00000022344	Rrp1	80	37.975	Nannospalax_galili
ENSLBEG00000021417	RRP1	51	66.346	ENSNBRG00000021980	-	52	66.346	Neolamprologus_brichardi
ENSLBEG00000021417	RRP1	89	47.472	ENSNLEG00000034734	RRP1	74	47.354	Nomascus_leucogenys
ENSLBEG00000021417	RRP1	89	41.176	ENSOPRG00000001319	RRP1	93	40.169	Ochotona_princeps
ENSLBEG00000021417	RRP1	89	45.556	ENSOANG00000006472	-	99	42.005	Ornithorhynchus_anatinus
ENSLBEG00000021417	RRP1	91	41.758	ENSOGAG00000009872	RRP1B	53	41.209	Otolemur_garnettii
ENSLBEG00000021417	RRP1	97	44.828	ENSOGAG00000006105	RRP1	77	48.179	Otolemur_garnettii
ENSLBEG00000021417	RRP1	84	46.884	ENSOARG00000011434	RRP1	72	47.353	Ovis_aries
ENSLBEG00000021417	RRP1	89	47.059	ENSPPAG00000029050	RRP1	74	47.207	Pan_paniscus
ENSLBEG00000021417	RRP1	95	47.792	ENSPPRG00000010656	RRP1	76	48.034	Panthera_pardus
ENSLBEG00000021417	RRP1	87	38.827	ENSPTIG00000016894	RRP1B	53	39.210	Panthera_tigris_altaica
ENSLBEG00000021417	RRP1	89	39.776	ENSPTIG00000019473	RRP1	70	40.741	Panthera_tigris_altaica
ENSLBEG00000021417	RRP1	89	47.339	ENSPTRG00000013962	RRP1	74	47.486	Pan_troglodytes
ENSLBEG00000021417	RRP1	89	46.927	ENSPANG00000015097	RRP1	74	46.648	Papio_anubis
ENSLBEG00000021417	RRP1	93	50.131	ENSPMGG00000007512	-	87	49.072	Periophthalmus_magnuspinnatus
ENSLBEG00000021417	RRP1	89	47.486	ENSPEMG00000018421	Rrp1	77	47.472	Peromyscus_maniculatus_bairdii
ENSLBEG00000021417	RRP1	90	44.722	ENSPCIG00000015523	-	75	44.167	Phascolarctos_cinereus
ENSLBEG00000021417	RRP1	99	64.736	ENSPLAG00000016684	-	51	67.391	Poecilia_latipinna
ENSLBEG00000021417	RRP1	89	47.059	ENSPPYG00000011474	RRP1	74	46.089	Pongo_abelii
ENSLBEG00000021417	RRP1	56	41.410	ENSPCAG00000008370	-	63	41.202	Procavia_capensis
ENSLBEG00000021417	RRP1	89	46.067	ENSPCOG00000017706	RRP1	77	45.556	Propithecus_coquereli
ENSLBEG00000021417	RRP1	89	46.240	ENSRNOG00000001203	Rrp1	78	46.537	Rattus_norvegicus
ENSLBEG00000021417	RRP1	89	47.500	ENSRBIG00000032082	RRP1	74	46.927	Rhinopithecus_bieti
ENSLBEG00000021417	RRP1	93	43.467	ENSRROG00000031499	RRP1B	50	43.360	Rhinopithecus_roxellana
ENSLBEG00000021417	RRP1	89	47.500	ENSRROG00000039799	RRP1	74	46.927	Rhinopithecus_roxellana
ENSLBEG00000021417	RRP1	89	47.059	ENSSBOG00000034689	RRP1	74	46.648	Saimiri_boliviensis_boliviensis
ENSLBEG00000021417	RRP1	79	45.741	ENSSHAG00000010304	-	92	43.385	Sarcophilus_harrisii
ENSLBEG00000021417	RRP1	92	52.116	ENSSFOG00015003932	-	53	48.588	Scleropages_formosus
ENSLBEG00000021417	RRP1	98	72.634	ENSSMAG00000016847	-	91	68.514	Scophthalmus_maximus
ENSLBEG00000021417	RRP1	97	42.051	ENSSSCG00000021698	RRP1B	53	41.644	Sus_scrofa
ENSLBEG00000021417	RRP1	93	45.600	ENSSSCG00000037061	RRP1	76	46.218	Sus_scrofa
ENSLBEG00000021417	RRP1	91	68.132	ENSTRUG00000017592	rrp1	99	65.565	Takifugu_rubripes
ENSLBEG00000021417	RRP1	91	63.612	ENSTNIG00000005053	rrp1	56	63.733	Tetraodon_nigroviridis
ENSLBEG00000021417	RRP1	90	38.544	ENSTBEG00000000422	RRP1B	54	38.906	Tupaia_belangeri
ENSLBEG00000021417	RRP1	74	46.939	ENSTTRG00000011162	RRP1	57	55.000	Tursiops_truncatus
ENSLBEG00000021417	RRP1	66	41.729	ENSUAMG00000014189	-	67	39.271	Ursus_americanus
ENSLBEG00000021417	RRP1	96	41.818	ENSUAMG00000026765	RRP1B	51	41.530	Ursus_americanus
ENSLBEG00000021417	RRP1	88	38.920	ENSUMAG00000025510	RRP1B	60	38.906	Ursus_maritimus
ENSLBEG00000021417	RRP1	85	46.921	ENSUMAG00000025507	RRP1	72	44.079	Ursus_maritimus