EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000021571 (Gene tree)
Gene ID: 109996165
Gene Symbol: rpusd2
Alias: -
Full Name: RNA pseudouridine synthase domain containing 2
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 2015 bases
Position: chrFKLU01000354.1:149531-151545
Accession: 109996165
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000028460	PseudoU_synth_2	PF00849.22	1e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000029801	-	1731	XM_020650173	ENSLBEP00000028460	576 (aa)	XP_020505829	UPI0009B484CF

Gene Model

Click here to download ENSLBEG00000021571's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000021571's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000021571	rpusd2	81	56.596	ENSG00000166133	RPUSD2	80	57.112	Homo_sapiens
ENSLBEG00000021571	rpusd2	99	71.843	ENSAPOG00000000817	rpusd2	100	71.843	Acanthochromis_polyacanthus
ENSLBEG00000021571	rpusd2	90	52.581	ENSAMEG00000016996	RPUSD2	80	56.550	Ailuropoda_melanoleuca
ENSLBEG00000021571	rpusd2	91	76.571	ENSACIG00000024029	rpusd2	97	77.344	Amphilophus_citrinellus
ENSLBEG00000021571	rpusd2	99	73.424	ENSAOCG00000015237	rpusd2	100	73.424	Amphiprion_ocellaris
ENSLBEG00000021571	rpusd2	99	72.479	ENSAPEG00000021763	rpusd2	100	72.479	Amphiprion_percula
ENSLBEG00000021571	rpusd2	99	72.362	ENSATEG00000015242	rpusd2	100	72.362	Anabas_testudineus
ENSLBEG00000021571	rpusd2	77	59.101	ENSAPLG00000004723	RPUSD2	100	59.101	Anas_platyrhynchos
ENSLBEG00000021571	rpusd2	80	59.436	ENSACAG00000013893	RPUSD2	91	59.259	Anolis_carolinensis
ENSLBEG00000021571	rpusd2	90	53.333	ENSANAG00000009691	RPUSD2	80	57.174	Aotus_nancymaae
ENSLBEG00000021571	rpusd2	99	69.676	ENSACLG00000019531	rpusd2	100	70.238	Astatotilapia_calliptera
ENSLBEG00000021571	rpusd2	85	67.113	ENSAMXG00000013376	rpusd2	80	68.098	Astyanax_mexicanus
ENSLBEG00000021571	rpusd2	82	56.871	ENSBTAG00000003193	RPUSD2	79	57.391	Bos_taurus
ENSLBEG00000021571	rpusd2	83	31.524	WBGene00019498	K07E8.7	97	33.412	Caenorhabditis_elegans
ENSLBEG00000021571	rpusd2	90	52.762	ENSCJAG00000020841	RPUSD2	80	56.522	Callithrix_jacchus
ENSLBEG00000021571	rpusd2	90	53.143	ENSCAFG00000009165	RPUSD2	84	53.846	Canis_familiaris
ENSLBEG00000021571	rpusd2	90	52.762	ENSCAFG00020005849	RPUSD2	84	53.846	Canis_lupus_dingo
ENSLBEG00000021571	rpusd2	88	54.653	ENSCHIG00000006152	RPUSD2	79	57.174	Capra_hircus
ENSLBEG00000021571	rpusd2	85	55.714	ENSTSYG00000012844	RPUSD2	81	57.174	Carlito_syrichta
ENSLBEG00000021571	rpusd2	90	52.788	ENSCPOG00000013201	RPUSD2	80	56.930	Cavia_porcellus
ENSLBEG00000021571	rpusd2	89	54.086	ENSCCAG00000024378	RPUSD2	80	56.739	Cebus_capucinus
ENSLBEG00000021571	rpusd2	89	54.012	ENSCATG00000043734	RPUSD2	80	56.893	Cercocebus_atys
ENSLBEG00000021571	rpusd2	89	55.146	ENSCLAG00000011862	RPUSD2	85	54.743	Chinchilla_lanigera
ENSLBEG00000021571	rpusd2	82	55.882	ENSCSAG00000007538	RPUSD2	85	56.371	Chlorocebus_sabaeus
ENSLBEG00000021571	rpusd2	63	53.022	ENSCHOG00000004834	RPUSD2	63	54.270	Choloepus_hoffmanni
ENSLBEG00000021571	rpusd2	82	59.109	ENSCPBG00000013419	RPUSD2	88	60.381	Chrysemys_picta_bellii
ENSLBEG00000021571	rpusd2	89	52.692	ENSCANG00000003659	RPUSD2	80	55.365	Colobus_angolensis_palliatus
ENSLBEG00000021571	rpusd2	82	56.025	ENSCGRG00001009839	Rpusd2	76	56.522	Cricetulus_griseus_chok1gshd
ENSLBEG00000021571	rpusd2	82	56.025	ENSCGRG00000012348	Rpusd2	78	56.522	Cricetulus_griseus_crigri
ENSLBEG00000021571	rpusd2	92	68.216	ENSCSEG00000001953	rpusd2	87	67.961	Cynoglossus_semilaevis
ENSLBEG00000021571	rpusd2	94	72.527	ENSCVAG00000010848	rpusd2	89	75.342	Cyprinodon_variegatus
ENSLBEG00000021571	rpusd2	87	66.600	ENSDARG00000060992	rpusd2	84	65.949	Danio_rerio
ENSLBEG00000021571	rpusd2	90	54.493	ENSDNOG00000047745	RPUSD2	81	57.609	Dasypus_novemcinctus
ENSLBEG00000021571	rpusd2	79	57.930	ENSDORG00000009092	Rpusd2	99	57.930	Dipodomys_ordii
ENSLBEG00000021571	rpusd2	84	43.080	FBgn0051719	RluA-1	66	42.885	Drosophila_melanogaster
ENSLBEG00000021571	rpusd2	88	42.308	FBgn0032256	RluA-2	86	42.629	Drosophila_melanogaster
ENSLBEG00000021571	rpusd2	90	54.352	ENSETEG00000008581	RPUSD2	82	57.734	Echinops_telfairi
ENSLBEG00000021571	rpusd2	75	36.281	ENSEBUG00000012149	rpusd2	83	36.054	Eptatretus_burgeri
ENSLBEG00000021571	rpusd2	89	53.891	ENSEASG00005016463	RPUSD2	78	57.391	Equus_asinus_asinus
ENSLBEG00000021571	rpusd2	89	54.175	ENSECAG00000024178	RPUSD2	78	57.391	Equus_caballus
ENSLBEG00000021571	rpusd2	98	46.372	ENSEEUG00000005132	RPUSD2	83	50.866	Erinaceus_europaeus
ENSLBEG00000021571	rpusd2	96	63.636	ENSELUG00000016786	rpusd2	91	67.383	Esox_lucius
ENSLBEG00000021571	rpusd2	91	52.416	ENSFCAG00000040796	RPUSD2	84	54.274	Felis_catus
ENSLBEG00000021571	rpusd2	78	59.556	ENSFALG00000001122	RPUSD2	97	60.652	Ficedula_albicollis
ENSLBEG00000021571	rpusd2	89	53.922	ENSFDAG00000003070	RPUSD2	85	57.768	Fukomys_damarensis
ENSLBEG00000021571	rpusd2	88	72.134	ENSFHEG00000007518	rpusd2	89	72.134	Fundulus_heteroclitus
ENSLBEG00000021571	rpusd2	86	70.659	ENSGMOG00000011014	rpusd2	99	70.659	Gadus_morhua
ENSLBEG00000021571	rpusd2	85	56.972	ENSGALG00000041216	RPUSD2	93	58.849	Gallus_gallus
ENSLBEG00000021571	rpusd2	87	74.059	ENSGAFG00000003390	rpusd2	86	74.059	Gambusia_affinis
ENSLBEG00000021571	rpusd2	90	76.660	ENSGACG00000008656	rpusd2	98	76.583	Gasterosteus_aculeatus
ENSLBEG00000021571	rpusd2	90	57.439	ENSGAGG00000013098	RPUSD2	85	62.174	Gopherus_agassizii
ENSLBEG00000021571	rpusd2	89	54.102	ENSGGOG00000006684	RPUSD2	80	56.893	Gorilla_gorilla
ENSLBEG00000021571	rpusd2	99	69.915	ENSHBUG00000023777	rpusd2	100	70.085	Haplochromis_burtoni
ENSLBEG00000021571	rpusd2	89	53.996	ENSHGLG00000012765	RPUSD2	80	56.987	Heterocephalus_glaber_female
ENSLBEG00000021571	rpusd2	89	53.996	ENSHGLG00100006653	RPUSD2	80	56.987	Heterocephalus_glaber_male
ENSLBEG00000021571	rpusd2	99	66.444	ENSHCOG00000015587	rpusd2	100	65.442	Hippocampus_comes
ENSLBEG00000021571	rpusd2	87	67.057	ENSIPUG00000021006	rpusd2	84	66.145	Ictalurus_punctatus
ENSLBEG00000021571	rpusd2	91	53.714	ENSSTOG00000025619	RPUSD2	79	57.734	Ictidomys_tridecemlineatus
ENSLBEG00000021571	rpusd2	80	58.696	ENSJJAG00000023160	Rpusd2	82	58.696	Jaculus_jaculus
ENSLBEG00000021571	rpusd2	88	72.710	ENSKMAG00000006618	rpusd2	87	72.710	Kryptolebias_marmoratus
ENSLBEG00000021571	rpusd2	79	59.615	ENSLACG00000017338	RPUSD2	99	59.615	Latimeria_chalumnae
ENSLBEG00000021571	rpusd2	88	65.564	ENSLOCG00000014755	rpusd2	99	65.564	Lepisosteus_oculatus
ENSLBEG00000021571	rpusd2	90	54.198	ENSLAFG00000015588	RPUSD2	83	57.267	Loxodonta_africana
ENSLBEG00000021571	rpusd2	89	54.086	ENSMFAG00000045062	RPUSD2	80	56.957	Macaca_fascicularis
ENSLBEG00000021571	rpusd2	89	54.086	ENSMMUG00000001483	RPUSD2	80	56.957	Macaca_mulatta
ENSLBEG00000021571	rpusd2	89	47.389	ENSMNEG00000041429	RPUSD2	80	49.460	Macaca_nemestrina
ENSLBEG00000021571	rpusd2	63	53.406	ENSMLEG00000036551	RPUSD2	80	53.463	Mandrillus_leucophaeus
ENSLBEG00000021571	rpusd2	100	67.107	ENSMAMG00000001077	rpusd2	99	67.107	Mastacembelus_armatus
ENSLBEG00000021571	rpusd2	91	74.953	ENSMZEG00005006947	rpusd2	98	76.654	Maylandia_zebra
ENSLBEG00000021571	rpusd2	82	59.579	ENSMGAG00000003058	RPUSD2	96	60.390	Meleagris_gallopavo
ENSLBEG00000021571	rpusd2	87	54.709	ENSMAUG00000020467	Rpusd2	78	57.081	Mesocricetus_auratus
ENSLBEG00000021571	rpusd2	86	55.020	ENSMICG00000028637	RPUSD2	80	57.174	Microcebus_murinus
ENSLBEG00000021571	rpusd2	98	50.523	ENSMOCG00000020061	Rpusd2	79	57.609	Microtus_ochrogaster
ENSLBEG00000021571	rpusd2	99	74.093	ENSMMOG00000012020	rpusd2	99	74.266	Mola_mola
ENSLBEG00000021571	rpusd2	81	57.928	ENSMODG00000000300	RPUSD2	81	58.442	Monodelphis_domestica
ENSLBEG00000021571	rpusd2	99	68.046	ENSMALG00000010024	rpusd2	100	68.046	Monopterus_albus
ENSLBEG00000021571	rpusd2	87	54.709	MGP_CAROLIEiJ_G0024130	Rpusd2	78	57.081	Mus_caroli
ENSLBEG00000021571	rpusd2	90	53.191	ENSMUSG00000027324	Rpusd2	78	56.522	Mus_musculus
ENSLBEG00000021571	rpusd2	87	54.309	MGP_PahariEiJ_G0025573	Rpusd2	78	56.645	Mus_pahari
ENSLBEG00000021571	rpusd2	90	53.295	MGP_SPRETEiJ_G0025046	Rpusd2	79	56.645	Mus_spretus
ENSLBEG00000021571	rpusd2	81	56.315	ENSMPUG00000008517	RPUSD2	79	56.156	Mustela_putorius_furo
ENSLBEG00000021571	rpusd2	82	57.717	ENSMLUG00000007971	RPUSD2	87	58.134	Myotis_lucifugus
ENSLBEG00000021571	rpusd2	99	51.478	ENSNGAG00000014126	Rpusd2	80	58.824	Nannospalax_galili
ENSLBEG00000021571	rpusd2	99	68.782	ENSNBRG00000010070	rpusd2	100	69.349	Neolamprologus_brichardi
ENSLBEG00000021571	rpusd2	89	54.070	ENSNLEG00000035735	RPUSD2	80	57.330	Nomascus_leucogenys
ENSLBEG00000021571	rpusd2	87	55.556	ENSMEUG00000008500	RPUSD2	84	58.747	Notamacropus_eugenii
ENSLBEG00000021571	rpusd2	86	56.073	ENSOPRG00000014177	-	81	58.170	Ochotona_princeps
ENSLBEG00000021571	rpusd2	89	54.297	ENSODEG00000017193	RPUSD2	81	57.330	Octodon_degus
ENSLBEG00000021571	rpusd2	90	73.524	ENSONIG00000020102	rpusd2	97	75.000	Oreochromis_niloticus
ENSLBEG00000021571	rpusd2	89	54.669	ENSOCUG00000015745	RPUSD2	78	57.952	Oryctolagus_cuniculus
ENSLBEG00000021571	rpusd2	94	69.686	ENSORLG00000015516	rpusd2	94	69.074	Oryzias_latipes
ENSLBEG00000021571	rpusd2	94	69.316	ENSORLG00020010533	rpusd2	94	68.704	Oryzias_latipes_hni
ENSLBEG00000021571	rpusd2	94	68.382	ENSORLG00015009206	rpusd2	94	67.778	Oryzias_latipes_hsok
ENSLBEG00000021571	rpusd2	97	68.638	ENSOMEG00000007355	rpusd2	89	68.638	Oryzias_melastigma
ENSLBEG00000021571	rpusd2	91	53.084	ENSOGAG00000004867	RPUSD2	84	57.174	Otolemur_garnettii
ENSLBEG00000021571	rpusd2	80	57.734	ENSOARG00000020235	RPUSD2	81	57.826	Ovis_aries
ENSLBEG00000021571	rpusd2	81	56.596	ENSPPAG00000032874	RPUSD2	80	57.112	Pan_paniscus
ENSLBEG00000021571	rpusd2	91	52.542	ENSPPRG00000010446	RPUSD2	85	54.274	Panthera_pardus
ENSLBEG00000021571	rpusd2	91	52.542	ENSPTIG00000013316	RPUSD2	85	54.274	Panthera_tigris_altaica
ENSLBEG00000021571	rpusd2	81	56.596	ENSPTRG00000006924	RPUSD2	80	57.112	Pan_troglodytes
ENSLBEG00000021571	rpusd2	89	53.772	ENSPANG00000019339	RPUSD2	80	56.587	Papio_anubis
ENSLBEG00000021571	rpusd2	93	59.732	ENSPKIG00000023017	rpusd2	82	62.703	Paramormyrops_kingsleyae
ENSLBEG00000021571	rpusd2	63	58.696	ENSPSIG00000012680	RPUSD2	100	58.696	Pelodiscus_sinensis
ENSLBEG00000021571	rpusd2	85	86.000	ENSPMGG00000018165	rpusd2	82	86.000	Periophthalmus_magnuspinnatus
ENSLBEG00000021571	rpusd2	89	53.204	ENSPEMG00000012878	Rpusd2	82	55.965	Peromyscus_maniculatus_bairdii
ENSLBEG00000021571	rpusd2	83	55.975	ENSPCIG00000023199	RPUSD2	80	57.081	Phascolarctos_cinereus
ENSLBEG00000021571	rpusd2	88	73.725	ENSPFOG00000006829	rpusd2	88	73.725	Poecilia_formosa
ENSLBEG00000021571	rpusd2	88	73.529	ENSPLAG00000022914	rpusd2	99	73.529	Poecilia_latipinna
ENSLBEG00000021571	rpusd2	88	73.725	ENSPMEG00000009835	rpusd2	99	73.725	Poecilia_mexicana
ENSLBEG00000021571	rpusd2	88	74.118	ENSPREG00000016441	rpusd2	85	74.118	Poecilia_reticulata
ENSLBEG00000021571	rpusd2	81	56.596	ENSPPYG00000006355	RPUSD2	80	57.112	Pongo_abelii
ENSLBEG00000021571	rpusd2	90	53.008	ENSPCOG00000028019	RPUSD2	80	57.174	Propithecus_coquereli
ENSLBEG00000021571	rpusd2	89	54.669	ENSPVAG00000001837	RPUSD2	80	57.952	Pteropus_vampyrus
ENSLBEG00000021571	rpusd2	87	74.800	ENSPNYG00000021507	rpusd2	94	75.200	Pundamilia_nyererei
ENSLBEG00000021571	rpusd2	88	53.571	ENSRNOG00000010528	LOC100911166	78	55.991	Rattus_norvegicus
ENSLBEG00000021571	rpusd2	88	53.571	ENSRNOG00000046797	Rpusd2	78	55.991	Rattus_norvegicus
ENSLBEG00000021571	rpusd2	89	53.578	ENSRBIG00000030813	RPUSD2	80	56.371	Rhinopithecus_bieti
ENSLBEG00000021571	rpusd2	89	53.385	ENSRROG00000026664	RPUSD2	80	56.156	Rhinopithecus_roxellana
ENSLBEG00000021571	rpusd2	88	54.545	ENSSBOG00000035031	RPUSD2	80	57.174	Saimiri_boliviensis_boliviensis
ENSLBEG00000021571	rpusd2	64	53.581	ENSSHAG00000015108	RPUSD2	91	54.645	Sarcophilus_harrisii
ENSLBEG00000021571	rpusd2	93	57.725	ENSSFOG00015019057	rpusd2	84	59.715	Scleropages_formosus
ENSLBEG00000021571	rpusd2	99	72.727	ENSSMAG00000000903	rpusd2	98	77.735	Scophthalmus_maximus
ENSLBEG00000021571	rpusd2	99	71.808	ENSSDUG00000019139	rpusd2	100	71.808	Seriola_dumerili
ENSLBEG00000021571	rpusd2	99	72.139	ENSSLDG00000005938	rpusd2	100	72.139	Seriola_lalandi_dorsalis
ENSLBEG00000021571	rpusd2	85	55.248	ENSSARG00000002792	RPUSD2	81	58.099	Sorex_araneus
ENSLBEG00000021571	rpusd2	85	55.600	ENSSPUG00000001206	RPUSD2	89	57.660	Sphenodon_punctatus
ENSLBEG00000021571	rpusd2	99	72.852	ENSSPAG00000003578	rpusd2	100	72.852	Stegastes_partitus
ENSLBEG00000021571	rpusd2	90	53.143	ENSSSCG00000036700	RPUSD2	79	56.957	Sus_scrofa
ENSLBEG00000021571	rpusd2	91	73.221	ENSTRUG00000025880	rpusd2	96	74.903	Takifugu_rubripes
ENSLBEG00000021571	rpusd2	89	73.190	ENSTNIG00000017329	rpusd2	98	73.373	Tetraodon_nigroviridis
ENSLBEG00000021571	rpusd2	81	50.955	ENSTBEG00000007933	RPUSD2	80	51.310	Tupaia_belangeri
ENSLBEG00000021571	rpusd2	90	53.846	ENSTTRG00000010585	RPUSD2	80	57.325	Tursiops_truncatus
ENSLBEG00000021571	rpusd2	90	52.571	ENSUAMG00000001470	RPUSD2	86	57.205	Ursus_americanus
ENSLBEG00000021571	rpusd2	91	52.471	ENSUMAG00000012487	RPUSD2	70	57.205	Ursus_maritimus
ENSLBEG00000021571	rpusd2	89	53.592	ENSVPAG00000003844	RPUSD2	80	57.267	Vicugna_pacos
ENSLBEG00000021571	rpusd2	90	52.762	ENSVVUG00000026590	RPUSD2	84	53.846	Vulpes_vulpes
ENSLBEG00000021571	rpusd2	83	57.261	ENSXETG00000015973	rpusd2	95	58.280	Xenopus_tropicalis
ENSLBEG00000021571	rpusd2	88	72.353	ENSXMAG00000021821	rpusd2	99	72.353	Xiphophorus_maculatus