EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000021585 (Gene tree)
Gene ID: 109983316
Gene Symbol: snrnp200
Alias: fb63a09|si:ch211-251j10.5|wu:fb63a09
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 14736 bases
Position: chrFKLU01000054.1:152250-166985
Accession: 109983316
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000028588	ResIII	PF04851.15	7.7e-26	1	2
ENSLBEP00000028588	ResIII	PF04851.15	7.7e-26	2	2
ENSLBEP00000028588	DEAD	PF00270.29	3.9e-53	1	2
ENSLBEP00000028588	DEAD	PF00270.29	3.9e-53	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000029934	-	6665	XM_020632955	ENSLBEP00000028588	2136 (aa)	XP_020488611	UPI0009B4683C

Gene Model

Click here to download ENSLBEG00000021585's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000021585's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000021585	snrnp200	65	31.533	ENSLBEG00000006759	hfm1	85	31.533
ENSLBEG00000021585	snrnp200	80	44.759	ENSLBEG00000009623	ascc3	95	44.816

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000021585	snrnp200	99	90.262	ENSG00000144028	SNRNP200	100	90.262	Homo_sapiens
ENSLBEG00000021585	snrnp200	100	98.221	ENSAPOG00000010223	snrnp200	100	98.221	Acanthochromis_polyacanthus
ENSLBEG00000021585	snrnp200	99	90.309	ENSAMEG00000008996	SNRNP200	100	90.309	Ailuropoda_melanoleuca
ENSLBEG00000021585	snrnp200	97	97.535	ENSACIG00000001764	snrnp200	98	97.535	Amphilophus_citrinellus
ENSLBEG00000021585	snrnp200	100	97.940	ENSAOCG00000024593	snrnp200	100	97.940	Amphiprion_ocellaris
ENSLBEG00000021585	snrnp200	97	97.428	ENSAPEG00000012554	snrnp200	100	97.428	Amphiprion_percula
ENSLBEG00000021585	snrnp200	100	97.940	ENSATEG00000022522	snrnp200	100	97.940	Anabas_testudineus
ENSLBEG00000021585	snrnp200	99	90.618	ENSAPLG00000004313	SNRNP200	100	90.618	Anas_platyrhynchos
ENSLBEG00000021585	snrnp200	99	89.930	ENSACAG00000000434	SNRNP200	100	89.930	Anolis_carolinensis
ENSLBEG00000021585	snrnp200	99	87.529	ENSANAG00000036625	SNRNP200	100	87.529	Aotus_nancymaae
ENSLBEG00000021585	snrnp200	100	97.331	ENSACLG00000011188	snrnp200	100	97.331	Astatotilapia_calliptera
ENSLBEG00000021585	snrnp200	99	94.734	ENSAMXG00000005684	snrnp200	100	94.710	Astyanax_mexicanus
ENSLBEG00000021585	snrnp200	99	90.075	ENSBTAG00000000848	SNRNP200	100	90.075	Bos_taurus
ENSLBEG00000021585	snrnp200	99	90.262	ENSCJAG00000007514	SNRNP200	100	90.262	Callithrix_jacchus
ENSLBEG00000021585	snrnp200	99	89.547	ENSCAFG00020019979	SNRNP200	100	91.249	Canis_lupus_dingo
ENSLBEG00000021585	snrnp200	99	90.122	ENSCHIG00000020611	SNRNP200	100	90.122	Capra_hircus
ENSLBEG00000021585	snrnp200	99	90.309	ENSTSYG00000010467	SNRNP200	100	90.309	Carlito_syrichta
ENSLBEG00000021585	snrnp200	99	89.798	ENSCAPG00000017234	SNRNP200	99	89.798	Cavia_aperea
ENSLBEG00000021585	snrnp200	99	90.122	ENSCPOG00000006776	SNRNP200	100	90.122	Cavia_porcellus
ENSLBEG00000021585	snrnp200	99	90.262	ENSCCAG00000033962	SNRNP200	100	90.262	Cebus_capucinus
ENSLBEG00000021585	snrnp200	99	90.262	ENSCATG00000015790	SNRNP200	100	90.262	Cercocebus_atys
ENSLBEG00000021585	snrnp200	99	90.169	ENSCLAG00000004116	SNRNP200	100	90.169	Chinchilla_lanigera
ENSLBEG00000021585	snrnp200	99	90.262	ENSCSAG00000017369	SNRNP200	100	90.262	Chlorocebus_sabaeus
ENSLBEG00000021585	snrnp200	72	92.913	ENSCHOG00000012981	-	58	92.913	Choloepus_hoffmanni
ENSLBEG00000021585	snrnp200	99	90.369	ENSCPBG00000022571	SNRNP200	100	90.369	Chrysemys_picta_bellii
ENSLBEG00000021585	snrnp200	99	75.572	ENSCING00000005082	-	99	75.666	Ciona_intestinalis
ENSLBEG00000021585	snrnp200	94	89.995	ENSCANG00000033932	SNRNP200	100	89.995	Colobus_angolensis_palliatus
ENSLBEG00000021585	snrnp200	99	90.262	ENSCGRG00001022610	Snrnp200	100	90.262	Cricetulus_griseus_chok1gshd
ENSLBEG00000021585	snrnp200	99	89.762	ENSCGRG00000016472	Snrnp200	100	89.762	Cricetulus_griseus_crigri
ENSLBEG00000021585	snrnp200	99	96.111	ENSCSEG00000016399	snrnp200	100	96.111	Cynoglossus_semilaevis
ENSLBEG00000021585	snrnp200	100	91.667	ENSCVAG00000017631	snrnp200	100	91.667	Cyprinodon_variegatus
ENSLBEG00000021585	snrnp200	100	94.616	ENSDARG00000077536	snrnp200	100	94.616	Danio_rerio
ENSLBEG00000021585	snrnp200	99	88.858	ENSDNOG00000011227	SNRNP200	100	88.858	Dasypus_novemcinctus
ENSLBEG00000021585	snrnp200	99	87.804	ENSDORG00000005861	Snrnp200	100	87.804	Dipodomys_ordii
ENSLBEG00000021585	snrnp200	100	73.650	FBgn0263599	l(3)72Ab	100	73.650	Drosophila_melanogaster
ENSLBEG00000021585	snrnp200	94	90.009	ENSETEG00000000162	SNRNP200	74	90.009	Echinops_telfairi
ENSLBEG00000021585	snrnp200	83	81.076	ENSEBUG00000016524	snrnp200	95	81.076	Eptatretus_burgeri
ENSLBEG00000021585	snrnp200	99	89.277	ENSEASG00005001884	SNRNP200	100	89.184	Equus_asinus_asinus
ENSLBEG00000021585	snrnp200	99	90.309	ENSECAG00000019675	SNRNP200	100	90.309	Equus_caballus
ENSLBEG00000021585	snrnp200	88	100.000	ENSEEUG00000012178	SNRNP200	93	100.000	Erinaceus_europaeus
ENSLBEG00000021585	snrnp200	100	96.350	ENSELUG00000018948	snrnp200	100	96.350	Esox_lucius
ENSLBEG00000021585	snrnp200	99	90.356	ENSFCAG00000010699	SNRNP200	100	90.356	Felis_catus
ENSLBEG00000021585	snrnp200	93	85.714	ENSFALG00000001368	-	95	85.714	Ficedula_albicollis
ENSLBEG00000021585	snrnp200	99	90.075	ENSFDAG00000004683	SNRNP200	100	90.075	Fukomys_damarensis
ENSLBEG00000021585	snrnp200	100	94.335	ENSFHEG00000003786	snrnp200	100	94.335	Fundulus_heteroclitus
ENSLBEG00000021585	snrnp200	100	95.327	ENSGMOG00000004881	snrnp200	99	95.187	Gadus_morhua
ENSLBEG00000021585	snrnp200	100	94.569	ENSGAFG00000010807	snrnp200	100	94.569	Gambusia_affinis
ENSLBEG00000021585	snrnp200	100	97.945	ENSGACG00000011474	snrnp200	99	97.945	Gasterosteus_aculeatus
ENSLBEG00000021585	snrnp200	95	90.488	ENSGAGG00000016069	SNRNP200	98	96.774	Gopherus_agassizii
ENSLBEG00000021585	snrnp200	99	90.262	ENSGGOG00000005174	SNRNP200	100	90.262	Gorilla_gorilla
ENSLBEG00000021585	snrnp200	97	94.712	ENSHBUG00000011322	snrnp200	99	94.712	Haplochromis_burtoni
ENSLBEG00000021585	snrnp200	99	90.122	ENSHGLG00000006654	SNRNP200	100	90.122	Heterocephalus_glaber_female
ENSLBEG00000021585	snrnp200	99	90.122	ENSHGLG00100018594	SNRNP200	100	90.122	Heterocephalus_glaber_male
ENSLBEG00000021585	snrnp200	99	90.309	ENSSTOG00000016351	SNRNP200	100	90.309	Ictidomys_tridecemlineatus
ENSLBEG00000021585	snrnp200	99	90.215	ENSJJAG00000023659	Snrnp200	100	90.215	Jaculus_jaculus
ENSLBEG00000021585	snrnp200	100	94.540	ENSKMAG00000003665	snrnp200	100	94.540	Kryptolebias_marmoratus
ENSLBEG00000021585	snrnp200	82	91.977	ENSLACG00000000226	SNRNP200	100	91.977	Latimeria_chalumnae
ENSLBEG00000021585	snrnp200	100	94.294	ENSLOCG00000015198	snrnp200	100	94.294	Lepisosteus_oculatus
ENSLBEG00000021585	snrnp200	99	90.169	ENSLAFG00000015626	SNRNP200	100	90.169	Loxodonta_africana
ENSLBEG00000021585	snrnp200	99	90.215	ENSMFAG00000040174	SNRNP200	99	91.279	Macaca_fascicularis
ENSLBEG00000021585	snrnp200	99	90.215	ENSMMUG00000023261	SNRNP200	100	90.215	Macaca_mulatta
ENSLBEG00000021585	snrnp200	99	90.169	ENSMNEG00000032398	SNRNP200	100	90.169	Macaca_nemestrina
ENSLBEG00000021585	snrnp200	99	90.262	ENSMLEG00000019083	SNRNP200	99	91.279	Mandrillus_leucophaeus
ENSLBEG00000021585	snrnp200	100	96.958	ENSMAMG00000007851	snrnp200	100	96.958	Mastacembelus_armatus
ENSLBEG00000021585	snrnp200	97	94.712	ENSMZEG00005010787	snrnp200	99	94.712	Maylandia_zebra
ENSLBEG00000021585	snrnp200	97	90.276	ENSMGAG00000001831	SNRNP200	99	90.282	Meleagris_gallopavo
ENSLBEG00000021585	snrnp200	99	90.309	ENSMAUG00000011825	Snrnp200	100	90.309	Mesocricetus_auratus
ENSLBEG00000021585	snrnp200	99	90.309	ENSMICG00000004710	SNRNP200	100	90.309	Microcebus_murinus
ENSLBEG00000021585	snrnp200	99	88.483	ENSMOCG00000011814	Snrnp200	100	88.483	Microtus_ochrogaster
ENSLBEG00000021585	snrnp200	100	95.787	ENSMMOG00000014167	snrnp200	100	95.787	Mola_mola
ENSLBEG00000021585	snrnp200	99	90.309	ENSMODG00000008475	SNRNP200	100	90.309	Monodelphis_domestica
ENSLBEG00000021585	snrnp200	100	97.472	ENSMALG00000001973	snrnp200	100	97.472	Monopterus_albus
ENSLBEG00000021585	snrnp200	99	90.169	MGP_CAROLIEiJ_G0024250	Snrnp200	100	90.169	Mus_caroli
ENSLBEG00000021585	snrnp200	99	90.215	ENSMUSG00000003660	Snrnp200	100	90.215	Mus_musculus
ENSLBEG00000021585	snrnp200	99	90.215	MGP_PahariEiJ_G0025695	Snrnp200	100	90.215	Mus_pahari
ENSLBEG00000021585	snrnp200	99	90.215	MGP_SPRETEiJ_G0025170	Snrnp200	100	91.160	Mus_spretus
ENSLBEG00000021585	snrnp200	99	90.356	ENSMPUG00000008949	SNRNP200	100	90.356	Mustela_putorius_furo
ENSLBEG00000021585	snrnp200	99	87.079	ENSMLUG00000027511	-	100	87.079	Myotis_lucifugus
ENSLBEG00000021585	snrnp200	99	89.902	ENSMLUG00000010493	SNRNP200	100	89.902	Myotis_lucifugus
ENSLBEG00000021585	snrnp200	99	90.262	ENSNGAG00000021993	Snrnp200	100	90.262	Nannospalax_galili
ENSLBEG00000021585	snrnp200	90	97.330	ENSNBRG00000017960	snrnp200	98	97.330	Neolamprologus_brichardi
ENSLBEG00000021585	snrnp200	99	85.960	ENSNLEG00000000025	SNRNP200	100	86.007	Nomascus_leucogenys
ENSLBEG00000021585	snrnp200	99	92.784	ENSMEUG00000010532	SNRNP200	79	90.476	Notamacropus_eugenii
ENSLBEG00000021585	snrnp200	96	89.105	ENSOPRG00000015464	SNRNP200	100	86.938	Ochotona_princeps
ENSLBEG00000021585	snrnp200	99	90.122	ENSODEG00000008366	SNRNP200	100	90.122	Octodon_degus
ENSLBEG00000021585	snrnp200	100	97.191	ENSONIG00000010714	snrnp200	100	97.191	Oreochromis_niloticus
ENSLBEG00000021585	snrnp200	99	90.215	ENSOCUG00000009864	SNRNP200	100	90.215	Oryctolagus_cuniculus
ENSLBEG00000021585	snrnp200	99	96.204	ENSORLG00000012286	snrnp200	100	96.294	Oryzias_latipes
ENSLBEG00000021585	snrnp200	99	96.298	ENSORLG00020004648	snrnp200	100	96.298	Oryzias_latipes_hni
ENSLBEG00000021585	snrnp200	99	96.345	ENSORLG00015019114	snrnp200	100	96.348	Oryzias_latipes_hsok
ENSLBEG00000021585	snrnp200	100	96.629	ENSOMEG00000011834	snrnp200	100	96.629	Oryzias_melastigma
ENSLBEG00000021585	snrnp200	99	90.309	ENSOGAG00000006879	SNRNP200	100	90.309	Otolemur_garnettii
ENSLBEG00000021585	snrnp200	99	89.424	ENSOARG00000013949	SNRNP200	100	89.424	Ovis_aries
ENSLBEG00000021585	snrnp200	99	90.262	ENSPPAG00000041559	SNRNP200	100	90.262	Pan_paniscus
ENSLBEG00000021585	snrnp200	99	90.356	ENSPPRG00000004435	SNRNP200	100	90.356	Panthera_pardus
ENSLBEG00000021585	snrnp200	99	89.934	ENSPTIG00000006380	SNRNP200	100	89.934	Panthera_tigris_altaica
ENSLBEG00000021585	snrnp200	99	90.262	ENSPTRG00000012230	SNRNP200	100	90.262	Pan_troglodytes
ENSLBEG00000021585	snrnp200	99	90.215	ENSPANG00000006017	SNRNP200	100	90.215	Papio_anubis
ENSLBEG00000021585	snrnp200	100	95.133	ENSPKIG00000014762	snrnp200	100	95.133	Paramormyrops_kingsleyae
ENSLBEG00000021585	snrnp200	99	89.565	ENSPSIG00000008580	SNRNP200	100	89.565	Pelodiscus_sinensis
ENSLBEG00000021585	snrnp200	99	90.262	ENSPCIG00000023050	SNRNP200	100	90.262	Phascolarctos_cinereus
ENSLBEG00000021585	snrnp200	100	96.865	ENSPFOG00000015110	snrnp200	100	96.865	Poecilia_formosa
ENSLBEG00000021585	snrnp200	97	97.250	ENSPLAG00000006711	snrnp200	99	97.250	Poecilia_latipinna
ENSLBEG00000021585	snrnp200	97	97.085	ENSPMEG00000021166	snrnp200	99	97.085	Poecilia_mexicana
ENSLBEG00000021585	snrnp200	100	96.957	ENSPREG00000008875	snrnp200	100	96.957	Poecilia_reticulata
ENSLBEG00000021585	snrnp200	99	90.262	ENSPPYG00000012068	SNRNP200	100	90.262	Pongo_abelii
ENSLBEG00000021585	snrnp200	97	94.872	ENSPCAG00000008536	SNRNP200	86	95.745	Procavia_capensis
ENSLBEG00000021585	snrnp200	99	90.262	ENSPCOG00000024608	SNRNP200	100	90.262	Propithecus_coquereli
ENSLBEG00000021585	snrnp200	96	90.072	ENSPVAG00000005860	SNRNP200	92	90.072	Pteropus_vampyrus
ENSLBEG00000021585	snrnp200	100	92.484	ENSPNYG00000017476	snrnp200	100	92.484	Pundamilia_nyererei
ENSLBEG00000021585	snrnp200	100	90.407	ENSPNAG00000010998	snrnp200	100	90.407	Pygocentrus_nattereri
ENSLBEG00000021585	snrnp200	99	90.309	ENSRNOG00000012157	Snrnp200	100	90.309	Rattus_norvegicus
ENSLBEG00000021585	snrnp200	99	90.262	ENSRBIG00000044690	-	100	90.262	Rhinopithecus_bieti
ENSLBEG00000021585	snrnp200	99	90.262	ENSRROG00000037952	-	100	90.262	Rhinopithecus_roxellana
ENSLBEG00000021585	snrnp200	99	90.262	ENSSBOG00000035471	SNRNP200	100	90.262	Saimiri_boliviensis_boliviensis
ENSLBEG00000021585	snrnp200	97	90.131	ENSSHAG00000000758	SNRNP200	99	90.136	Sarcophilus_harrisii
ENSLBEG00000021585	snrnp200	99	95.066	ENSSFOG00015018826	snrnp200	100	95.040	Scleropages_formosus
ENSLBEG00000021585	snrnp200	100	98.642	ENSSMAG00000005463	snrnp200	100	98.642	Scophthalmus_maximus
ENSLBEG00000021585	snrnp200	100	98.174	ENSSDUG00000021410	snrnp200	100	98.174	Seriola_dumerili
ENSLBEG00000021585	snrnp200	100	98.174	ENSSLDG00000010884	snrnp200	100	98.174	Seriola_lalandi_dorsalis
ENSLBEG00000021585	snrnp200	95	88.740	ENSSARG00000010728	SNRNP200	96	88.710	Sorex_araneus
ENSLBEG00000021585	snrnp200	99	90.730	ENSSPUG00000003726	-	100	90.730	Sphenodon_punctatus
ENSLBEG00000021585	snrnp200	100	98.408	ENSSPAG00000001842	snrnp200	100	98.408	Stegastes_partitus
ENSLBEG00000021585	snrnp200	99	90.356	ENSSSCG00000008127	SNRNP200	100	90.356	Sus_scrofa
ENSLBEG00000021585	snrnp200	99	82.331	ENSTGUG00000014475	-	100	82.331	Taeniopygia_guttata
ENSLBEG00000021585	snrnp200	100	96.536	ENSTRUG00000001307	snrnp200	100	96.536	Takifugu_rubripes
ENSLBEG00000021585	snrnp200	99	91.482	ENSTNIG00000004320	snrnp200	100	84.198	Tetraodon_nigroviridis
ENSLBEG00000021585	snrnp200	82	92.488	ENSTBEG00000003329	-	67	92.488	Tupaia_belangeri
ENSLBEG00000021585	snrnp200	99	90.122	ENSTTRG00000004983	SNRNP200	100	90.122	Tursiops_truncatus
ENSLBEG00000021585	snrnp200	75	83.721	ENSUAMG00000008395	-	95	83.430	Ursus_americanus
ENSLBEG00000021585	snrnp200	99	90.356	ENSUMAG00000012385	SNRNP200	100	90.356	Ursus_maritimus
ENSLBEG00000021585	snrnp200	87	93.568	ENSVPAG00000006434	SNRNP200	66	93.568	Vicugna_pacos
ENSLBEG00000021585	snrnp200	99	90.145	ENSVVUG00000026247	SNRNP200	100	90.145	Vulpes_vulpes
ENSLBEG00000021585	snrnp200	99	90.365	ENSXETG00000001243	snrnp200	100	90.365	Xenopus_tropicalis
ENSLBEG00000021585	snrnp200	97	97.320	ENSXMAG00000002058	snrnp200	98	97.320	Xiphophorus_maculatus