EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000021596 (Gene tree)
Gene ID: 109984403
Gene Symbol: -
Alias: -
Full Name: non-canonical poly(A) RNA polymerase PAPD7-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 11207 bases
Position: chrFKLU01000070.1:227818-239024
Accession: 109984403
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000028511	PAP_assoc	PF03828.19	7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000029852	-	4684	XM_020634541	ENSLBEP00000028511	830 (aa)	XP_020490197	UPI0009B2ECDD

Gene Model

Click here to download ENSLBEG00000021596's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000021596's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000021596	-	99	46.796	ENSLBEG00000025657	tent4a	76	89.655

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000021596	-	75	52.492	ENSG00000112941	TENT4A	100	77.778	Homo_sapiens
ENSLBEG00000021596	-	100	78.631	ENSAPOG00000018106	-	100	78.151	Acanthochromis_polyacanthus
ENSLBEG00000021596	-	67	54.878	ENSAMEG00000002806	TENT4A	97	53.927	Ailuropoda_melanoleuca
ENSLBEG00000021596	-	51	62.093	ENSACIG00000013326	tent4a	97	50.000	Amphilophus_citrinellus
ENSLBEG00000021596	-	74	67.961	ENSACIG00000014234	-	91	66.505	Amphilophus_citrinellus
ENSLBEG00000021596	-	62	68.000	ENSAOCG00000019251	tent4a	74	89.655	Amphiprion_ocellaris
ENSLBEG00000021596	-	100	78.333	ENSAOCG00000013501	-	100	78.571	Amphiprion_ocellaris
ENSLBEG00000021596	-	100	78.597	ENSAPEG00000015522	-	100	78.954	Amphiprion_percula
ENSLBEG00000021596	-	62	67.778	ENSAPEG00000002703	tent4a	74	89.655	Amphiprion_percula
ENSLBEG00000021596	-	100	47.582	ENSATEG00000006898	tent4a	75	86.207	Anabas_testudineus
ENSLBEG00000021596	-	100	81.078	ENSATEG00000024197	-	100	80.719	Anabas_testudineus
ENSLBEG00000021596	-	79	87.097	ENSANAG00000037806	TENT4A	85	87.097	Aotus_nancymaae
ENSLBEG00000021596	-	100	72.052	ENSACLG00000016812	-	100	70.637	Astatotilapia_calliptera
ENSLBEG00000021596	-	50	65.394	ENSACLG00000014408	tent4a	98	52.090	Astatotilapia_calliptera
ENSLBEG00000021596	-	68	71.795	ENSAMXG00000017691	tent4a	55	69.048	Astyanax_mexicanus
ENSLBEG00000021596	-	84	52.654	ENSAMXG00000039964	TENT4A	99	46.552	Astyanax_mexicanus
ENSLBEG00000021596	-	65	54.332	ENSBTAG00000003381	TENT4A	98	58.765	Bos_taurus
ENSLBEG00000021596	-	75	52.167	ENSCJAG00000008742	TENT4A	75	51.703	Callithrix_jacchus
ENSLBEG00000021596	-	67	55.148	ENSCAFG00000010319	TENT4A	97	54.101	Canis_familiaris
ENSLBEG00000021596	-	67	55.148	ENSCAFG00020022835	TENT4A	97	54.101	Canis_lupus_dingo
ENSLBEG00000021596	-	67	55.965	ENSCHIG00000017328	TENT4A	97	55.185	Capra_hircus
ENSLBEG00000021596	-	68	53.002	ENSTSYG00000000631	TENT4A	99	53.002	Carlito_syrichta
ENSLBEG00000021596	-	67	54.306	ENSCAPG00000007792	TENT4A	97	53.954	Cavia_aperea
ENSLBEG00000021596	-	76	51.589	ENSCPOG00000009006	TENT4A	97	53.954	Cavia_porcellus
ENSLBEG00000021596	-	77	51.502	ENSCCAG00000006730	TENT4A	99	51.946	Cebus_capucinus
ENSLBEG00000021596	-	75	51.735	ENSCATG00000034531	TENT4A	80	51.087	Cercocebus_atys
ENSLBEG00000021596	-	68	53.571	ENSCLAG00000003733	TENT4A	99	53.231	Chinchilla_lanigera
ENSLBEG00000021596	-	67	53.054	ENSCSAG00000017336	TENT4A	99	52.659	Chlorocebus_sabaeus
ENSLBEG00000021596	-	79	84.375	ENSCPBG00000006514	TENT4A	84	84.375	Chrysemys_picta_bellii
ENSLBEG00000021596	-	68	52.659	ENSCANG00000022871	TENT4A	99	51.777	Colobus_angolensis_palliatus
ENSLBEG00000021596	-	77	53.021	ENSCGRG00001014344	Tent4a	77	52.424	Cricetulus_griseus_chok1gshd
ENSLBEG00000021596	-	67	55.009	ENSCGRG00000006274	Tent4a	99	53.979	Cricetulus_griseus_crigri
ENSLBEG00000021596	-	77	51.458	ENSCSEG00000011470	tent4a	75	86.667	Cynoglossus_semilaevis
ENSLBEG00000021596	-	100	82.738	ENSCSEG00000003887	-	100	82.976	Cynoglossus_semilaevis
ENSLBEG00000021596	-	57	90.735	ENSCVAG00000008463	-	98	90.735	Cyprinodon_variegatus
ENSLBEG00000021596	-	84	48.739	ENSCVAG00000021741	tent4a	55	65.796	Cyprinodon_variegatus
ENSLBEG00000021596	-	76	63.327	ENSDARG00000062114	tent4a	82	73.184	Danio_rerio
ENSLBEG00000021596	-	75	53.528	ENSDNOG00000015096	TENT4A	90	52.665	Dasypus_novemcinctus
ENSLBEG00000021596	-	68	54.031	ENSDORG00000023216	Tent4a	99	53.633	Dipodomys_ordii
ENSLBEG00000021596	-	67	55.634	ENSEASG00005018583	TENT4A	97	54.577	Equus_asinus_asinus
ENSLBEG00000021596	-	83	52.215	ENSELUG00000024141	tent4a	71	74.359	Esox_lucius
ENSLBEG00000021596	-	79	87.097	ENSFCAG00000003474	TENT4A	78	87.097	Felis_catus
ENSLBEG00000021596	-	68	54.152	ENSFDAG00000005946	TENT4A	99	53.899	Fukomys_damarensis
ENSLBEG00000021596	-	99	45.434	ENSFHEG00000017843	tent4a	75	89.655	Fundulus_heteroclitus
ENSLBEG00000021596	-	100	70.848	ENSFHEG00000006086	-	100	71.804	Fundulus_heteroclitus
ENSLBEG00000021596	-	53	73.867	ENSGALG00000013061	PAPD7	71	81.518	Gallus_gallus
ENSLBEG00000021596	-	80	86.667	ENSGAFG00000018741	tent4a	75	86.667	Gambusia_affinis
ENSLBEG00000021596	-	100	74.881	ENSGAFG00000000179	-	100	74.405	Gambusia_affinis
ENSLBEG00000021596	-	86	47.534	ENSGGOG00000013866	-	94	47.737	Gorilla_gorilla
ENSLBEG00000021596	-	100	72.406	ENSHBUG00000001038	-	100	70.991	Haplochromis_burtoni
ENSLBEG00000021596	-	50	64.916	ENSHBUG00000022127	tent4a	98	51.768	Haplochromis_burtoni
ENSLBEG00000021596	-	80	87.097	ENSHGLG00000005593	TENT4A	80	87.097	Heterocephalus_glaber_female
ENSLBEG00000021596	-	67	54.839	ENSHGLG00100016621	TENT4A	97	54.049	Heterocephalus_glaber_male
ENSLBEG00000021596	-	53	92.013	ENSHCOG00000000915	-	90	92.013	Hippocampus_comes
ENSLBEG00000021596	-	99	47.766	ENSHCOG00000018008	tent4a	73	53.715	Hippocampus_comes
ENSLBEG00000021596	-	55	69.348	ENSIPUG00000014941	tent4a	85	70.455	Ictalurus_punctatus
ENSLBEG00000021596	-	68	54.325	ENSSTOG00000004554	TENT4A	99	53.688	Ictidomys_tridecemlineatus
ENSLBEG00000021596	-	68	54.325	ENSJJAG00000007205	Tent4a	99	53.356	Jaculus_jaculus
ENSLBEG00000021596	-	77	51.230	ENSKMAG00000000725	tent4a	84	69.832	Kryptolebias_marmoratus
ENSLBEG00000021596	-	99	73.969	ENSKMAG00000019925	-	100	73.852	Kryptolebias_marmoratus
ENSLBEG00000021596	-	99	50.118	ENSLOCG00000008727	tent4a	95	51.969	Lepisosteus_oculatus
ENSLBEG00000021596	-	68	52.324	ENSLAFG00000004787	TENT4A	99	52.324	Loxodonta_africana
ENSLBEG00000021596	-	75	52.344	ENSMFAG00000038658	TENT4A	79	52.690	Macaca_fascicularis
ENSLBEG00000021596	-	75	52.344	ENSMMUG00000013189	TENT4A	75	52.690	Macaca_mulatta
ENSLBEG00000021596	-	75	52.344	ENSMNEG00000029090	TENT4A	75	52.690	Macaca_nemestrina
ENSLBEG00000021596	-	67	53.054	ENSMLEG00000030994	TENT4A	99	52.659	Mandrillus_leucophaeus
ENSLBEG00000021596	-	100	78.084	ENSMAMG00000024030	-	100	77.844	Mastacembelus_armatus
ENSLBEG00000021596	-	100	71.934	ENSMZEG00005001805	-	100	70.519	Maylandia_zebra
ENSLBEG00000021596	-	77	51.679	ENSMZEG00005000080	tent4a	71	52.582	Maylandia_zebra
ENSLBEG00000021596	-	69	54.152	ENSMGAG00000006315	TENT4A	71	81.188	Meleagris_gallopavo
ENSLBEG00000021596	-	67	54.657	ENSMAUG00000008017	Tent4a	99	53.633	Mesocricetus_auratus
ENSLBEG00000021596	-	68	53.002	ENSMICG00000016562	TENT4A	84	87.097	Microcebus_murinus
ENSLBEG00000021596	-	68	54.325	ENSMOCG00000008477	Tent4a	99	53.726	Microtus_ochrogaster
ENSLBEG00000021596	-	78	51.756	ENSMMOG00000021181	tent4a	79	67.464	Mola_mola
ENSLBEG00000021596	-	56	87.774	ENSMMOG00000008539	-	99	87.774	Mola_mola
ENSLBEG00000021596	-	85	54.854	ENSMODG00000002052	TENT4A	71	87.097	Monodelphis_domestica
ENSLBEG00000021596	-	82	78.924	ENSMALG00000018694	-	99	78.779	Monopterus_albus
ENSLBEG00000021596	-	75	53.185	ENSMALG00000002692	tent4a	83	53.373	Monopterus_albus
ENSLBEG00000021596	-	75	50.784	MGP_CAROLIEiJ_G0018689	-	77	50.840	Mus_caroli
ENSLBEG00000021596	-	77	52.950	ENSMUSG00000034575	Tent4a	99	54.246	Mus_musculus
ENSLBEG00000021596	-	77	53.101	MGP_PahariEiJ_G0015770	-	77	52.807	Mus_pahari
ENSLBEG00000021596	-	75	48.754	MGP_SPRETEiJ_G0019573	-	77	47.800	Mus_spretus
ENSLBEG00000021596	-	67	54.625	ENSMPUG00000007530	TENT4A	97	53.578	Mustela_putorius_furo
ENSLBEG00000021596	-	67	53.873	ENSMLUG00000004424	TENT4A	97	53.697	Myotis_lucifugus
ENSLBEG00000021596	-	68	55.017	ENSNGAG00000006352	Tent4a	99	53.899	Nannospalax_galili
ENSLBEG00000021596	-	57	87.540	ENSNBRG00000009218	TENT4A	95	87.540	Neolamprologus_brichardi
ENSLBEG00000021596	-	75	47.031	ENSNLEG00000011434	-	85	46.835	Nomascus_leucogenys
ENSLBEG00000021596	-	57	44.196	ENSMEUG00000004007	TENT4A	99	42.474	Notamacropus_eugenii
ENSLBEG00000021596	-	68	54.202	ENSODEG00000018357	TENT4A	99	52.721	Octodon_degus
ENSLBEG00000021596	-	68	55.903	ENSOANG00000011579	-	99	55.903	Ornithorhynchus_anatinus
ENSLBEG00000021596	-	68	54.386	ENSOCUG00000017025	TENT4A	99	53.806	Oryctolagus_cuniculus
ENSLBEG00000021596	-	99	67.551	ENSORLG00000027691	-	99	67.551	Oryzias_latipes
ENSLBEG00000021596	-	99	45.921	ENSORLG00000025175	tent4a	74	53.724	Oryzias_latipes
ENSLBEG00000021596	-	99	68.034	ENSORLG00020022661	-	99	68.034	Oryzias_latipes_hni
ENSLBEG00000021596	-	99	46.217	ENSORLG00020019731	tent4a	74	53.724	Oryzias_latipes_hni
ENSLBEG00000021596	-	99	65.541	ENSORLG00015006327	-	99	65.541	Oryzias_latipes_hsok
ENSLBEG00000021596	-	55	84.984	ENSOMEG00000014052	-	98	84.984	Oryzias_melastigma
ENSLBEG00000021596	-	68	52.487	ENSOGAG00000015032	TENT4A	99	52.551	Otolemur_garnettii
ENSLBEG00000021596	-	67	55.789	ENSOARG00000014904	TENT4A	97	55.009	Ovis_aries
ENSLBEG00000021596	-	67	53.521	ENSPPAG00000034356	TENT4A	99	53.114	Pan_paniscus
ENSLBEG00000021596	-	67	55.124	ENSPPRG00000002409	TENT4A	97	54.417	Panthera_pardus
ENSLBEG00000021596	-	75	52.492	ENSPTRG00000016717	TENT4A	85	86.957	Pan_troglodytes
ENSLBEG00000021596	-	75	51.735	ENSPANG00000004005	TENT4A	79	51.087	Papio_anubis
ENSLBEG00000021596	-	67	77.778	ENSPKIG00000024130	tent4a	72	77.778	Paramormyrops_kingsleyae
ENSLBEG00000021596	-	76	56.270	ENSPKIG00000020499	-	74	56.230	Paramormyrops_kingsleyae
ENSLBEG00000021596	-	69	54.872	ENSPSIG00000015964	TENT4A	100	53.675	Pelodiscus_sinensis
ENSLBEG00000021596	-	72	76.403	ENSPMGG00000007999	TENT4A	100	90.000	Periophthalmus_magnuspinnatus
ENSLBEG00000021596	-	53	67.123	ENSPMGG00000004132	tent4a	98	52.778	Periophthalmus_magnuspinnatus
ENSLBEG00000021596	-	68	54.202	ENSPEMG00000024121	Tent4a	99	53.952	Peromyscus_maniculatus_bairdii
ENSLBEG00000021596	-	85	54.700	ENSPCIG00000017056	TENT4A	74	87.097	Phascolarctos_cinereus
ENSLBEG00000021596	-	100	74.970	ENSPFOG00000016762	-	100	74.493	Poecilia_formosa
ENSLBEG00000021596	-	88	46.592	ENSPFOG00000003961	tent4a	57	89.655	Poecilia_formosa
ENSLBEG00000021596	-	72	79.333	ENSPLAG00000004468	TENT4A	99	94.964	Poecilia_latipinna
ENSLBEG00000021596	-	99	44.530	ENSPLAG00000007134	tent4a	75	86.667	Poecilia_latipinna
ENSLBEG00000021596	-	99	45.393	ENSPMEG00000006428	tent4a	75	86.667	Poecilia_mexicana
ENSLBEG00000021596	-	100	72.782	ENSPMEG00000009954	-	100	72.302	Poecilia_mexicana
ENSLBEG00000021596	-	55	76.923	ENSPREG00000017547	tent4a	98	51.994	Poecilia_reticulata
ENSLBEG00000021596	-	100	62.036	ENSPREG00000011257	TENT4A	100	76.360	Poecilia_reticulata
ENSLBEG00000021596	-	68	52.659	ENSPPYG00000015334	-	99	52.397	Pongo_abelii
ENSLBEG00000021596	-	75	52.181	ENSPCOG00000016295	TENT4A	99	51.607	Propithecus_coquereli
ENSLBEG00000021596	-	67	53.484	ENSPVAG00000000511	TENT4A	97	53.054	Pteropus_vampyrus
ENSLBEG00000021596	-	50	65.394	ENSPNYG00000010769	tent4a	98	52.251	Pundamilia_nyererei
ENSLBEG00000021596	-	56	83.387	ENSPNYG00000008164	TENT4A	97	83.387	Pundamilia_nyererei
ENSLBEG00000021596	-	57	65.092	ENSPNAG00000026563	tent4a	62	63.765	Pygocentrus_nattereri
ENSLBEG00000021596	-	99	49.522	ENSPNAG00000011603	TENT4A	76	55.538	Pygocentrus_nattereri
ENSLBEG00000021596	-	67	53.927	ENSRNOG00000017613	Tent4a	99	53.380	Rattus_norvegicus
ENSLBEG00000021596	-	67	53.054	ENSRBIG00000027491	TENT4A	99	52.659	Rhinopithecus_bieti
ENSLBEG00000021596	-	67	53.054	ENSRROG00000039864	TENT4A	99	52.659	Rhinopithecus_roxellana
ENSLBEG00000021596	-	67	53.229	ENSSBOG00000035549	TENT4A	99	51.946	Saimiri_boliviensis_boliviensis
ENSLBEG00000021596	-	67	56.195	ENSSHAG00000012100	TENT4A	97	54.930	Sarcophilus_harrisii
ENSLBEG00000021596	-	50	71.667	ENSSFOG00015001756	tent4a	86	71.942	Scleropages_formosus
ENSLBEG00000021596	-	76	52.181	ENSSMAG00000020671	tent4a	98	53.312	Scophthalmus_maximus
ENSLBEG00000021596	-	55	95.847	ENSSMAG00000003989	-	99	95.847	Scophthalmus_maximus
ENSLBEG00000021596	-	100	86.915	ENSSDUG00000014825	-	100	86.915	Seriola_dumerili
ENSLBEG00000021596	-	100	87.395	ENSSLDG00000019746	-	100	87.395	Seriola_lalandi_dorsalis
ENSLBEG00000021596	-	51	68.276	ENSSLDG00000004371	tent4a	98	54.675	Seriola_lalandi_dorsalis
ENSLBEG00000021596	-	100	80.788	ENSSPAG00000017401	-	100	81.623	Stegastes_partitus
ENSLBEG00000021596	-	75	52.914	ENSSSCG00000017102	TENT4A	74	52.656	Sus_scrofa
ENSLBEG00000021596	-	69	54.545	ENSTGUG00000007771	TENT4A	57	81.188	Taeniopygia_guttata
ENSLBEG00000021596	-	73	54.992	ENSTRUG00000012098	tent4a	82	71.429	Takifugu_rubripes
ENSLBEG00000021596	-	92	84.204	ENSTRUG00000006698	-	98	83.551	Takifugu_rubripes
ENSLBEG00000021596	-	58	50.103	ENSTNIG00000000791	tent4a	99	50.826	Tetraodon_nigroviridis
ENSLBEG00000021596	-	67	53.590	ENSTTRG00000012547	TENT4A	97	54.291	Tursiops_truncatus
ENSLBEG00000021596	-	74	53.145	ENSUAMG00000024711	TENT4A	99	52.126	Ursus_americanus
ENSLBEG00000021596	-	67	54.878	ENSUMAG00000021088	TENT4A	97	53.927	Ursus_maritimus
ENSLBEG00000021596	-	67	55.148	ENSVVUG00000017702	TENT4A	97	54.101	Vulpes_vulpes
ENSLBEG00000021596	-	51	64.941	ENSXCOG00000002570	tent4a	98	51.603	Xiphophorus_couchianus
ENSLBEG00000021596	-	57	86.859	ENSXMAG00000026228	TENT4A	100	86.859	Xiphophorus_maculatus
ENSLBEG00000021596	-	80	83.333	ENSXMAG00000013580	tent4a	75	83.333	Xiphophorus_maculatus