EuRBPDB

Description
Ensembl ID
ENSLBEG00000021604 (Gene tree)
Gene ID
109998965
Gene Symbol
rpa1
Alias
wu:fi14b08|zgc:55337|zgc:77092
Full Name
replication protein A1
Gene Type
protein_coding
Species
Labrus_bergylta
Status
putative
Strand
Plus strand
Length
24328 bases
Position
chrFKLU01000013.1:1458717-1483044
Accession
109998965
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein ID
Domain
Pfam ID
E-value
Domain number
Total number
ENSLBEP00000028539tRNA_anti-codonPF01336.259.1e-1111
ENSLBEP00000028522tRNA_anti-codonPF01336.251e-1011
Transcripts
Transcript ID
Name
Length
RefSeq ID
Protein ID
Length
RefSeq ID
UniportKB ID
ENSLBET00000029863-3238XM_020653925ENSLBEP00000028522605 (aa)XP_020509581UPI0009B48590
ENSLBET00000029882-3163-ENSLBEP00000028539580 (aa)--
Gene Model
Protein-Protein Interaction (PPI)
Paralogs
Ensembl ID
Gene Symbol
Coverage
Identiy
Paralog
Gene Symbol
Coverage
Identiy
ENSLBEG00000021604rpa19766.893ENSLBEG00000002281RPA18266.893
Orthologs
Ensembl ID
Gene Symbol
Coverage
Identiy
Ortholog
Gene Symbol
Coverage
Identiy
Species
ENSLBEG00000021604rpa19866.157ENSAPOG00000019409RPA18962.551Acanthochromis_polyacanthus
ENSLBEG00000021604rpa110082.479ENSAPOG00000011658rpa110082.479Acanthochromis_polyacanthus
ENSLBEG00000021604rpa19662.901ENSAMEG00000007706RPA19662.901Ailuropoda_melanoleuca
ENSLBEG00000021604rpa19674.699ENSACIG00000007277rpa19974.699Amphilophus_citrinellus
ENSLBEG00000021604rpa19560.714ENSACIG00000012881RPA19960.714Amphilophus_citrinellus
ENSLBEG00000021604rpa19984.245ENSAOCG00000023376rpa19984.245Amphiprion_ocellaris
ENSLBEG00000021604rpa19667.873ENSAOCG00000009003RPA19957.121Amphiprion_ocellaris
ENSLBEG00000021604rpa19984.411ENSAPEG00000008634rpa19984.411Amphiprion_percula
ENSLBEG00000021604rpa19668.326ENSAPEG00000019132RPA18868.326Amphiprion_percula
ENSLBEG00000021604rpa19867.756ENSATEG00000006443RPA19958.552Anabas_testudineus
ENSLBEG00000021604rpa19583.186ENSATEG00000022024rpa19983.186Anabas_testudineus
ENSLBEG00000021604rpa19654.737ENSAPLG00000012442RPA19954.887Anas_platyrhynchos
ENSLBEG00000021604rpa19956.333ENSACAG00000014490RPA19956.667Anolis_carolinensis
ENSLBEG00000021604rpa19664.171ENSANAG00000023456RPA19864.171Aotus_nancymaae
ENSLBEG00000021604rpa19959.718ENSACLG00000005223RPA19959.718Astatotilapia_calliptera
ENSLBEG00000021604rpa19484.022ENSACLG00000006640rpa19984.022Astatotilapia_calliptera
ENSLBEG00000021604rpa19976.412ENSAMXG00000008418rpa19977.917Astyanax_mexicanus
ENSLBEG00000021604rpa19961.702ENSBTAG00000009711RPA19961.702Bos_taurus
ENSLBEG00000021604rpa18430.409WBGene00017546rpa-17630.409Caenorhabditis_elegans
ENSLBEG00000021604rpa19960.621ENSCJAG00000001848RPA19961.338Callithrix_jacchus
ENSLBEG00000021604rpa19963.562ENSCAFG00000019249RPA19963.562Canis_familiaris
ENSLBEG00000021604rpa19963.562ENSCAFG00020009847RPA19963.562Canis_lupus_dingo
ENSLBEG00000021604rpa19961.866ENSCHIG00000026308RPA19962.193Capra_hircus
ENSLBEG00000021604rpa19961.664ENSTSYG00000003482-9961.664Carlito_syrichta
ENSLBEG00000021604rpa19962.255ENSCPOG00000000035RPA19962.255Cavia_porcellus
ENSLBEG00000021604rpa19950.812ENSCCAG00000010981RPA19951.702Cebus_capucinus
ENSLBEG00000021604rpa19961.664ENSCLAG00000005185-9961.664Chinchilla_lanigera
ENSLBEG00000021604rpa19957.912ENSCLAG00000015045-9957.912Chinchilla_lanigera
ENSLBEG00000021604rpa19952.358ENSCSAG00000013833RPA19952.606Chlorocebus_sabaeus
ENSLBEG00000021604rpa19561.840ENSCHOG00000013540-9961.840Choloepus_hoffmanni
ENSLBEG00000021604rpa17569.266ENSCHOG00000009454-9969.266Choloepus_hoffmanni
ENSLBEG00000021604rpa19963.072ENSCPBG00000020377RPA19963.972Chrysemys_picta_bellii
ENSLBEG00000021604rpa19941.983ENSCING00000023482-9842.140Ciona_intestinalis
ENSLBEG00000021604rpa19664.947ENSCANG00000030911RPA19864.947Colobus_angolensis_palliatus
ENSLBEG00000021604rpa19962.114ENSCGRG00001008197Rpa19962.114Cricetulus_griseus_chok1gshd
ENSLBEG00000021604rpa18065.432ENSCGRG00000000582Rpa19964.370Cricetulus_griseus_crigri
ENSLBEG00000021604rpa19977.504ENSCSEG00000013066rpa19977.504Cynoglossus_semilaevis
ENSLBEG00000021604rpa19954.473ENSCSEG00000012726RPA19955.366Cynoglossus_semilaevis
ENSLBEG00000021604rpa19980.820ENSCVAG00000019431rpa19981.139Cyprinodon_variegatus
ENSLBEG00000021604rpa19469.438ENSCVAG00000013446-8369.438Cyprinodon_variegatus
ENSLBEG00000021604rpa19974.751ENSDARG00000003938rpa19974.751Danio_rerio
ENSLBEG00000021604rpa19663.007ENSDNOG00000017218RPA19663.007Dasypus_novemcinctus
ENSLBEG00000021604rpa19962.255ENSDORG00000006199Rpa19962.255Dipodomys_ordii
ENSLBEG00000021604rpa19942.140FBgn0010173RpA-709942.642Drosophila_melanogaster
ENSLBEG00000021604rpa18272.165ENSETEG00000017608RPA18272.165Echinops_telfairi
ENSLBEG00000021604rpa19664.528ENSEASG00005009372RPA19964.845Equus_asinus_asinus
ENSLBEG00000021604rpa19962.520ENSECAG00000023886RPA19962.520Equus_caballus
ENSLBEG00000021604rpa17268.735ENSEEUG00000002186-6868.735Erinaceus_europaeus
ENSLBEG00000021604rpa18863.137ENSELUG00000006136RPA19963.137Esox_lucius
ENSLBEG00000021604rpa19977.668ENSELUG00000021071rpa19977.668Esox_lucius
ENSLBEG00000021604rpa19962.092ENSFCAG00000006306RPA19962.092Felis_catus
ENSLBEG00000021604rpa19963.011ENSFALG00000006575RPA19963.011Ficedula_albicollis
ENSLBEG00000021604rpa19963.072ENSFDAG00000007720RPA19963.072Fukomys_damarensis
ENSLBEG00000021604rpa19982.149ENSFHEG00000003580rpa19982.149Fundulus_heteroclitus
ENSLBEG00000021604rpa19978.472ENSGMOG00000010382rpa19978.472Gadus_morhua
ENSLBEG00000021604rpa19961.248ENSGALG00000003072RPA19961.248Gallus_gallus
ENSLBEG00000021604rpa19980.298ENSGAFG00000012916rpa19980.298Gambusia_affinis
ENSLBEG00000021604rpa19957.580ENSGAFG00000020953RPA19957.580Gambusia_affinis
ENSLBEG00000021604rpa19981.788ENSGACG00000010856rpa19981.788Gasterosteus_aculeatus
ENSLBEG00000021604rpa19962.745ENSGAGG00000013611RPA19962.745Gopherus_agassizii
ENSLBEG00000021604rpa19963.918ENSGGOG00000014186RPA19963.918Gorilla_gorilla
ENSLBEG00000021604rpa110085.455ENSHBUG00000017773rpa19985.455Haplochromis_burtoni
ENSLBEG00000021604rpa19557.496ENSHBUG00000009348RPA19857.496Haplochromis_burtoni
ENSLBEG00000021604rpa19962.582ENSHGLG00000008846RPA19962.582Heterocephalus_glaber_female
ENSLBEG00000021604rpa19958.824ENSHGLG00100000799-9958.824Heterocephalus_glaber_male
ENSLBEG00000021604rpa19962.582ENSHGLG00100017755-9962.582Heterocephalus_glaber_male
ENSLBEG00000021604rpa19952.846ENSHGLG00100002005-9952.846Heterocephalus_glaber_male
ENSLBEG00000021604rpa19975.450ENSHCOG00000001401rpa19975.777Hippocampus_comes
ENSLBEG00000021604rpa19945.517ENSHCOG00000000351RPA19945.470Hippocampus_comes
ENSLBEG00000021604rpa19975.082ENSIPUG00000004400rpa19975.205Ictalurus_punctatus
ENSLBEG00000021604rpa19360.413ENSSTOG00000022475RPA19760.413Ictidomys_tridecemlineatus
ENSLBEG00000021604rpa19663.220ENSJJAG00000000876Rpa19863.220Jaculus_jaculus
ENSLBEG00000021604rpa19979.153ENSKMAG00000005605rpa19979.479Kryptolebias_marmoratus
ENSLBEG00000021604rpa19959.247ENSKMAG00000000234RPA19959.247Kryptolebias_marmoratus
ENSLBEG00000021604rpa17863.956ENSLACG00000007210RPA19960.521Latimeria_chalumnae
ENSLBEG00000021604rpa19969.917ENSLOCG00000006397rpa19970.033Lepisosteus_oculatus
ENSLBEG00000021604rpa19960.484ENSLAFG00000015354RPA19960.484Loxodonta_africana
ENSLBEG00000021604rpa18061.010ENSMFAG00000036138-9860.931Macaca_fascicularis
ENSLBEG00000021604rpa19662.901ENSMMUG00000011604-9862.838Macaca_mulatta
ENSLBEG00000021604rpa19956.507ENSMMUG00000002442-9956.507Macaca_mulatta
ENSLBEG00000021604rpa19960.948ENSMNEG00000031632-9960.884Macaca_nemestrina
ENSLBEG00000021604rpa19955.651ENSMNEG00000029837-9862.741Macaca_nemestrina
ENSLBEG00000021604rpa19659.564ENSMLEG00000038768-9859.496Mandrillus_leucophaeus
ENSLBEG00000021604rpa19985.762ENSMAMG00000017993rpa19986.837Mastacembelus_armatus
ENSLBEG00000021604rpa19968.910ENSMAMG00000020097RPA18966.958Mastacembelus_armatus
ENSLBEG00000021604rpa110085.124ENSMZEG00005007551rpa19985.124Maylandia_zebra
ENSLBEG00000021604rpa19959.718ENSMZEG00005024731RPA19959.718Maylandia_zebra
ENSLBEG00000021604rpa19960.561ENSMGAG00000005315RPA19860.561Meleagris_gallopavo
ENSLBEG00000021604rpa19662.712ENSMAUG00000010474Rpa19863.158Mesocricetus_auratus
ENSLBEG00000021604rpa19962.726ENSMICG00000012867RPA19962.726Microcebus_murinus
ENSLBEG00000021604rpa19962.336ENSMOCG00000013019Rpa19962.336Microtus_ochrogaster
ENSLBEG00000021604rpa19860.136ENSMMOG00000010868RPA19860.136Mola_mola
ENSLBEG00000021604rpa19980.960ENSMMOG00000014292rpa19982.847Mola_mola
ENSLBEG00000021604rpa19961.338ENSMODG00000010549RPA19961.338Monodelphis_domestica
ENSLBEG00000021604rpa19985.667ENSMALG00000011453rpa19985.667Monopterus_albus
ENSLBEG00000021604rpa19669.005ENSMALG00000001208RPA18165.900Monopterus_albus
ENSLBEG00000021604rpa19961.702MGP_CAROLIEiJ_G0016734Rpa19961.702Mus_caroli
ENSLBEG00000021604rpa19960.552ENSMUSG00000000751Rpa19960.552Mus_musculus
ENSLBEG00000021604rpa19961.664MGP_PahariEiJ_G0017871Rpa19961.664Mus_pahari
ENSLBEG00000021604rpa19960.454MGP_SPRETEiJ_G0017577Rpa19960.454Mus_spretus
ENSLBEG00000021604rpa19962.175ENSMPUG00000013119RPA19962.175Mustela_putorius_furo
ENSLBEG00000021604rpa19961.750ENSMLUG00000006113RPA19961.750Myotis_lucifugus
ENSLBEG00000021604rpa19563.265ENSNGAG00000004522Rpa19463.265Nannospalax_galili
ENSLBEG00000021604rpa19583.481ENSNBRG00000020595rpa19983.481Neolamprologus_brichardi
ENSLBEG00000021604rpa19858.140ENSNBRG00000009672RPA19758.306Neolamprologus_brichardi
ENSLBEG00000021604rpa19962.276ENSNLEG00000017149RPA19962.378Nomascus_leucogenys
ENSLBEG00000021604rpa19753.679ENSMEUG00000006714RPA19953.679Notamacropus_eugenii
ENSLBEG00000021604rpa19661.474ENSODEG00000009038RPA19661.474Octodon_degus
ENSLBEG00000021604rpa110084.365ENSONIG00000013135rpa19984.365Oreochromis_niloticus
ENSLBEG00000021604rpa19664.081ENSOANG00000010880RPA19863.912Ornithorhynchus_anatinus
ENSLBEG00000021604rpa19960.218ENSOCUG00000001504RPA19960.218Oryctolagus_cuniculus
ENSLBEG00000021604rpa19982.587ENSORLG00000004856rpa19982.587Oryzias_latipes
ENSLBEG00000021604rpa19964.516ENSORLG00000003368RPA19264.516Oryzias_latipes
ENSLBEG00000021604rpa19966.063ENSORLG00020015284RPA19955.053Oryzias_latipes_hni
ENSLBEG00000021604rpa19982.587ENSORLG00020008980rpa19982.587Oryzias_latipes_hni
ENSLBEG00000021604rpa17265.301ENSORLG00015005867-9565.301Oryzias_latipes_hsok
ENSLBEG00000021604rpa19956.786ENSORLG00015020383RPA19956.786Oryzias_latipes_hsok
ENSLBEG00000021604rpa19982.587ENSORLG00015013982rpa19982.587Oryzias_latipes_hsok
ENSLBEG00000021604rpa19558.549ENSOMEG00000011040RPA19958.669Oryzias_melastigma
ENSLBEG00000021604rpa19978.109ENSOMEG00000004704rpa19978.109Oryzias_melastigma
ENSLBEG00000021604rpa19961.726ENSOGAG00000005581-9961.726Otolemur_garnettii
ENSLBEG00000021604rpa17673.370ENSOGAG00000029379-9773.864Otolemur_garnettii
ENSLBEG00000021604rpa19961.866ENSOARG00000014479RPA19962.193Ovis_aries
ENSLBEG00000021604rpa19962.052ENSPPAG00000039680RPA19962.153Pan_paniscus
ENSLBEG00000021604rpa19961.928ENSPPRG00000011807RPA19961.928Panthera_pardus
ENSLBEG00000021604rpa19961.928ENSPTIG00000007898RPA19961.928Panthera_tigris_altaica
ENSLBEG00000021604rpa19962.378ENSPTRG00000008539RPA19962.480Pan_troglodytes
ENSLBEG00000021604rpa19961.990ENSPANG00000024592RPA19961.928Papio_anubis
ENSLBEG00000021604rpa19476.049ENSPKIG00000008053rpa19476.357Paramormyrops_kingsleyae
ENSLBEG00000021604rpa19763.149ENSPSIG00000015617RPA19963.149Pelodiscus_sinensis
ENSLBEG00000021604rpa19958.503ENSPMGG00000000543RPA19960.180Periophthalmus_magnuspinnatus
ENSLBEG00000021604rpa19980.651ENSPMGG00000011589rpa19980.651Periophthalmus_magnuspinnatus
ENSLBEG00000021604rpa19963.175ENSPEMG00000021061Rpa19963.175Peromyscus_maniculatus_bairdii
ENSLBEG00000021604rpa19961.501ENSPCIG00000019049RPA19961.501Phascolarctos_cinereus
ENSLBEG00000021604rpa19981.623ENSPFOG00000003987rpa19981.623Poecilia_formosa
ENSLBEG00000021604rpa19458.279ENSPLAG00000008844-9658.279Poecilia_latipinna
ENSLBEG00000021604rpa19981.457ENSPLAG00000004984rpa19981.457Poecilia_latipinna
ENSLBEG00000021604rpa19981.788ENSPMEG00000020602rpa19981.788Poecilia_mexicana
ENSLBEG00000021604rpa19458.117ENSPMEG00000003627-9657.792Poecilia_mexicana
ENSLBEG00000021604rpa19669.388ENSPREG00000010119RPA19955.952Poecilia_reticulata
ENSLBEG00000021604rpa19374.911ENSPREG00000010174rpa19574.778Poecilia_reticulata
ENSLBEG00000021604rpa19962.357ENSPCOG00000001799RPA19962.357Propithecus_coquereli
ENSLBEG00000021604rpa19961.075ENSPVAG00000002149RPA19961.075Pteropus_vampyrus
ENSLBEG00000021604rpa110085.455ENSPNYG00000016316rpa19985.455Pundamilia_nyererei
ENSLBEG00000021604rpa19959.561ENSPNYG00000024165RPA19959.561Pundamilia_nyererei
ENSLBEG00000021604rpa19967.780ENSPNAG00000008599rpa19670.087Pygocentrus_nattereri
ENSLBEG00000021604rpa19668.293ENSRNOG00000003123Rpa19962.500Rattus_norvegicus
ENSLBEG00000021604rpa19961.463ENSRBIG00000036587RPA19961.463Rhinopithecus_bieti
ENSLBEG00000021604rpa19956.748ENSRROG00000043278RPA19956.748Rhinopithecus_roxellana
ENSLBEG00000021604rpa19431.336YAR007CRFA19331.070Saccharomyces_cerevisiae
ENSLBEG00000021604rpa19163.214ENSSBOG00000030233RPA19763.993Saimiri_boliviensis_boliviensis
ENSLBEG00000021604rpa19960.884ENSSHAG00000007969RPA19861.866Sarcophilus_harrisii
ENSLBEG00000021604rpa19977.318ENSSFOG00015005362rpa19277.318Scleropages_formosus
ENSLBEG00000021604rpa19669.231ENSSMAG00000019746RPA18769.231Scophthalmus_maximus
ENSLBEG00000021604rpa19985.099ENSSDUG00000011949rpa19985.099Seriola_dumerili
ENSLBEG00000021604rpa19470.208ENSSDUG00000016358RPA18868.559Seriola_dumerili
ENSLBEG00000021604rpa19985.430ENSSLDG00000011806rpa19985.430Seriola_lalandi_dorsalis
ENSLBEG00000021604rpa19469.515ENSSLDG00000020784RPA18867.904Seriola_lalandi_dorsalis
ENSLBEG00000021604rpa18666.667ENSSARG00000007506RPA19848.731Sorex_araneus
ENSLBEG00000021604rpa19761.279ENSSPUG00000007223RPA19961.279Sphenodon_punctatus
ENSLBEG00000021604rpa19985.430ENSSPAG00000009903rpa19985.430Stegastes_partitus
ENSLBEG00000021604rpa19961.333ENSSPAG00000011165RPA19861.333Stegastes_partitus
ENSLBEG00000021604rpa19963.683ENSSSCG00000017822RPA19963.683Sus_scrofa
ENSLBEG00000021604rpa19962.171ENSTGUG00000005775RPA19962.171Taeniopygia_guttata
ENSLBEG00000021604rpa19982.919ENSTRUG00000003616rpa19983.056Takifugu_rubripes
ENSLBEG00000021604rpa19968.065ENSTRUG00000000405RPA18866.667Takifugu_rubripes
ENSLBEG00000021604rpa19984.565ENSTNIG00000016199rpa19984.729Tetraodon_nigroviridis
ENSLBEG00000021604rpa17669.318ENSTBEG00000002709RPA17469.318Tupaia_belangeri
ENSLBEG00000021604rpa19960.884ENSTTRG00000001169RPA19961.211Tursiops_truncatus
ENSLBEG00000021604rpa18669.231ENSUAMG00000015676RPA19569.231Ursus_americanus
ENSLBEG00000021604rpa19964.028ENSUMAG00000009328RPA19964.028Ursus_maritimus
ENSLBEG00000021604rpa19960.526ENSVPAG00000009443RPA19960.526Vicugna_pacos
ENSLBEG00000021604rpa19963.175ENSVVUG00000021715RPA19963.175Vulpes_vulpes
ENSLBEG00000021604rpa19967.438ENSXETG00000013538rpa19967.822Xenopus_tropicalis
ENSLBEG00000021604rpa19562.433ENSXCOG00000009899-9962.433Xiphophorus_couchianus
ENSLBEG00000021604rpa19379.574ENSXCOG00000010068rpa19479.574Xiphophorus_couchianus
ENSLBEG00000021604rpa19980.132ENSXMAG00000004102rpa19981.317Xiphophorus_maculatus
ENSLBEG00000021604rpa19668.934ENSXMAG00000010333RPA18668.934Xiphophorus_maculatus