EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000021823 (Gene tree)
Gene ID: 109998958
Gene Symbol: tsr1
Alias: fc52b09|wu:fc52b09|zgc:123319
Full Name: TSR1%2C ribosome maturation factor
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 10660 bases
Position: chrFKLU01000013.1:1831585-1842244
Accession: 109998958
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000028826	AARP2CN	PF08142.12	1.9e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000030178	-	3008	XM_020653912	ENSLBEP00000028826	838 (aa)	XP_020509568	UPI0009B3E348

Gene Model

Click here to download ENSLBEG00000021823's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000021823's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000021823	tsr1	99	54.272	ENSG00000167721	TSR1	99	54.031	Homo_sapiens
ENSLBEG00000021823	tsr1	99	88.889	ENSAPOG00000020891	tsr1	100	88.172	Acanthochromis_polyacanthus
ENSLBEG00000021823	tsr1	99	54.676	ENSAMEG00000007599	TSR1	99	53.318	Ailuropoda_melanoleuca
ENSLBEG00000021823	tsr1	99	84.671	ENSACIG00000007090	tsr1	100	83.473	Amphilophus_citrinellus
ENSLBEG00000021823	tsr1	99	88.144	ENSAOCG00000023284	tsr1	100	88.144	Amphiprion_ocellaris
ENSLBEG00000021823	tsr1	93	88.303	ENSAPEG00000008452	tsr1	100	88.046	Amphiprion_percula
ENSLBEG00000021823	tsr1	99	87.500	ENSATEG00000021961	tsr1	100	87.143	Anabas_testudineus
ENSLBEG00000021823	tsr1	89	57.560	ENSAPLG00000013422	TSR1	98	57.748	Anas_platyrhynchos
ENSLBEG00000021823	tsr1	71	49.500	ENSACAG00000000859	TSR1	92	48.253	Anolis_carolinensis
ENSLBEG00000021823	tsr1	99	54.392	ENSANAG00000031071	TSR1	99	55.048	Aotus_nancymaae
ENSLBEG00000021823	tsr1	100	85.680	ENSACLG00000007595	tsr1	100	85.084	Astatotilapia_calliptera
ENSLBEG00000021823	tsr1	50	74.524	ENSAMXG00000008470	tsr1	89	74.524	Astyanax_mexicanus
ENSLBEG00000021823	tsr1	98	55.942	ENSBTAG00000004225	TSR1	99	55.222	Bos_taurus
ENSLBEG00000021823	tsr1	99	53.550	ENSCJAG00000012456	TSR1	98	54.756	Callithrix_jacchus
ENSLBEG00000021823	tsr1	89	53.183	ENSCAFG00000019273	-	100	55.411	Canis_familiaris
ENSLBEG00000021823	tsr1	99	55.288	ENSCAFG00000002106	-	99	53.682	Canis_familiaris
ENSLBEG00000021823	tsr1	99	55.168	ENSCAFG00020009728	TSR1	99	53.563	Canis_lupus_dingo
ENSLBEG00000021823	tsr1	99	56.197	ENSCHIG00000023935	TSR1	99	55.516	Capra_hircus
ENSLBEG00000021823	tsr1	99	54.874	ENSTSYG00000005468	TSR1	99	54.436	Carlito_syrichta
ENSLBEG00000021823	tsr1	92	54.922	ENSCPOG00000014833	TSR1	99	54.510	Cavia_porcellus
ENSLBEG00000021823	tsr1	92	53.299	ENSCCAG00000028962	TSR1	98	53.876	Cebus_capucinus
ENSLBEG00000021823	tsr1	97	54.634	ENSCATG00000044262	TSR1	98	54.634	Cercocebus_atys
ENSLBEG00000021823	tsr1	99	55.475	ENSCLAG00000005567	TSR1	99	54.513	Chinchilla_lanigera
ENSLBEG00000021823	tsr1	97	54.756	ENSCSAG00000013788	TSR1	98	54.756	Chlorocebus_sabaeus
ENSLBEG00000021823	tsr1	98	55.085	ENSCPBG00000020363	TSR1	98	54.439	Chrysemys_picta_bellii
ENSLBEG00000021823	tsr1	96	44.606	ENSCING00000020658	-	99	43.932	Ciona_intestinalis
ENSLBEG00000021823	tsr1	95	43.966	ENSCSAVG00000001875	-	100	43.103	Ciona_savignyi
ENSLBEG00000021823	tsr1	97	48.724	ENSCANG00000033056	TSR1	98	48.780	Colobus_angolensis_palliatus
ENSLBEG00000021823	tsr1	99	81.437	ENSCSEG00000013009	tsr1	100	80.719	Cynoglossus_semilaevis
ENSLBEG00000021823	tsr1	99	83.832	ENSCVAG00000000506	tsr1	100	83.234	Cyprinodon_variegatus
ENSLBEG00000021823	tsr1	99	73.903	ENSDARG00000007744	tsr1	100	74.232	Danio_rerio
ENSLBEG00000021823	tsr1	99	55.716	ENSDNOG00000004715	TSR1	99	57.343	Dasypus_novemcinctus
ENSLBEG00000021823	tsr1	95	47.696	ENSDORG00000023234	-	99	47.395	Dipodomys_ordii
ENSLBEG00000021823	tsr1	99	53.911	ENSDORG00000016371	-	99	53.717	Dipodomys_ordii
ENSLBEG00000021823	tsr1	96	44.034	FBgn0037073	Tsr1	96	42.561	Drosophila_melanogaster
ENSLBEG00000021823	tsr1	86	66.885	ENSETEG00000017534	TSR1	88	66.885	Echinops_telfairi
ENSLBEG00000021823	tsr1	94	51.458	ENSEBUG00000013731	TSR1	97	50.444	Eptatretus_burgeri
ENSLBEG00000021823	tsr1	99	56.057	ENSEASG00005009302	TSR1	98	55.107	Equus_asinus_asinus
ENSLBEG00000021823	tsr1	99	56.197	ENSECAG00000009114	TSR1	99	55.235	Equus_caballus
ENSLBEG00000021823	tsr1	100	75.357	ENSELUG00000020984	tsr1	96	75.357	Esox_lucius
ENSLBEG00000021823	tsr1	99	55.301	ENSFCAG00000006313	TSR1	99	54.502	Felis_catus
ENSLBEG00000021823	tsr1	99	57.262	ENSFALG00000006532	TSR1	99	56.147	Ficedula_albicollis
ENSLBEG00000021823	tsr1	99	54.578	ENSFDAG00000006038	TSR1	99	54.096	Fukomys_damarensis
ENSLBEG00000021823	tsr1	100	84.048	ENSFHEG00000003626	tsr1	100	83.810	Fundulus_heteroclitus
ENSLBEG00000021823	tsr1	99	73.540	ENSGMOG00000010336	tsr1	100	73.421	Gadus_morhua
ENSLBEG00000021823	tsr1	100	81.764	ENSGAFG00000012993	tsr1	100	81.406	Gambusia_affinis
ENSLBEG00000021823	tsr1	99	85.137	ENSGACG00000010843	tsr1	100	85.137	Gasterosteus_aculeatus
ENSLBEG00000021823	tsr1	98	55.448	ENSGAGG00000025619	-	99	54.708	Gopherus_agassizii
ENSLBEG00000021823	tsr1	99	54.513	ENSGGOG00000001704	TSR1	99	54.272	Gorilla_gorilla
ENSLBEG00000021823	tsr1	100	86.038	ENSHBUG00000017904	tsr1	100	85.561	Haplochromis_burtoni
ENSLBEG00000021823	tsr1	99	55.396	ENSHGLG00000012806	-	99	54.448	Heterocephalus_glaber_female
ENSLBEG00000021823	tsr1	96	48.632	ENSHGLG00000015688	-	98	47.426	Heterocephalus_glaber_female
ENSLBEG00000021823	tsr1	99	55.396	ENSHGLG00100015392	TSR1	99	54.448	Heterocephalus_glaber_male
ENSLBEG00000021823	tsr1	99	80.240	ENSHCOG00000001432	tsr1	100	80.000	Hippocampus_comes
ENSLBEG00000021823	tsr1	99	74.762	ENSIPUG00000004618	tsr1	100	74.167	Ictalurus_punctatus
ENSLBEG00000021823	tsr1	99	55.596	ENSSTOG00000011819	TSR1	99	54.916	Ictidomys_tridecemlineatus
ENSLBEG00000021823	tsr1	90	53.473	ENSJJAG00000019505	Tsr1	95	52.818	Jaculus_jaculus
ENSLBEG00000021823	tsr1	100	83.652	ENSKMAG00000005763	tsr1	100	83.790	Kryptolebias_marmoratus
ENSLBEG00000021823	tsr1	99	57.651	ENSLACG00000002197	TSR1	100	55.920	Latimeria_chalumnae
ENSLBEG00000021823	tsr1	91	80.263	ENSLOCG00000006491	TSR1	99	80.263	Lepisosteus_oculatus
ENSLBEG00000021823	tsr1	97	54.878	ENSMFAG00000021330	TSR1	98	54.878	Macaca_fascicularis
ENSLBEG00000021823	tsr1	97	55.122	ENSMMUG00000017519	TSR1	98	54.756	Macaca_mulatta
ENSLBEG00000021823	tsr1	97	54.878	ENSMNEG00000031382	TSR1	98	54.878	Macaca_nemestrina
ENSLBEG00000021823	tsr1	97	54.512	ENSMLEG00000036733	TSR1	98	54.512	Mandrillus_leucophaeus
ENSLBEG00000021823	tsr1	100	86.358	ENSMAMG00000017918	tsr1	100	87.189	Mastacembelus_armatus
ENSLBEG00000021823	tsr1	99	86.005	ENSMZEG00005007477	tsr1	100	85.048	Maylandia_zebra
ENSLBEG00000021823	tsr1	99	57.619	ENSMGAG00000005576	TSR1	100	56.651	Meleagris_gallopavo
ENSLBEG00000021823	tsr1	99	55.368	ENSMICG00000012943	TSR1	99	55.889	Microcebus_murinus
ENSLBEG00000021823	tsr1	99	53.245	ENSMOCG00000022764	Tsr1	99	52.934	Microtus_ochrogaster
ENSLBEG00000021823	tsr1	99	86.826	ENSMMOG00000014280	tsr1	100	86.347	Mola_mola
ENSLBEG00000021823	tsr1	98	55.596	ENSMODG00000010658	TSR1	99	54.994	Monodelphis_domestica
ENSLBEG00000021823	tsr1	99	86.946	ENSMALG00000011681	tsr1	100	88.263	Monopterus_albus
ENSLBEG00000021823	tsr1	99	54.031	MGP_CAROLIEiJ_G0016727	Tsr1	99	53.477	Mus_caroli
ENSLBEG00000021823	tsr1	99	54.753	ENSMUSG00000038335	Tsr1	99	54.077	Mus_musculus
ENSLBEG00000021823	tsr1	99	55.355	MGP_PahariEiJ_G0017864	Tsr1	99	54.556	Mus_pahari
ENSLBEG00000021823	tsr1	99	54.753	MGP_SPRETEiJ_G0017570	Tsr1	99	54.077	Mus_spretus
ENSLBEG00000021823	tsr1	81	58.065	ENSMPUG00000013000	TSR1	100	56.808	Mustela_putorius_furo
ENSLBEG00000021823	tsr1	98	56.643	ENSMLUG00000003505	TSR1	99	56.197	Myotis_lucifugus
ENSLBEG00000021823	tsr1	100	86.396	ENSNBRG00000020728	tsr1	100	86.038	Neolamprologus_brichardi
ENSLBEG00000021823	tsr1	99	49.337	ENSNLEG00000017184	TSR1	96	66.476	Nomascus_leucogenys
ENSLBEG00000021823	tsr1	99	85.273	ENSONIG00000013131	tsr1	100	83.510	Oreochromis_niloticus
ENSLBEG00000021823	tsr1	98	56.265	ENSOCUG00000014256	TSR1	99	55.078	Oryctolagus_cuniculus
ENSLBEG00000021823	tsr1	100	82.936	ENSORLG00000004926	tsr1	100	82.816	Oryzias_latipes
ENSLBEG00000021823	tsr1	100	82.697	ENSORLG00020008792	tsr1	100	82.816	Oryzias_latipes_hni
ENSLBEG00000021823	tsr1	100	83.055	ENSORLG00015013838	tsr1	100	82.936	Oryzias_latipes_hsok
ENSLBEG00000021823	tsr1	100	84.248	ENSOMEG00000004830	tsr1	100	84.010	Oryzias_melastigma
ENSLBEG00000021823	tsr1	99	54.578	ENSOGAG00000004492	TSR1	99	54.816	Otolemur_garnettii
ENSLBEG00000021823	tsr1	99	56.197	ENSOARG00000015437	TSR1	97	55.516	Ovis_aries
ENSLBEG00000021823	tsr1	99	54.272	ENSPPAG00000036355	TSR1	99	54.031	Pan_paniscus
ENSLBEG00000021823	tsr1	99	54.940	ENSPPRG00000015519	-	99	54.142	Panthera_pardus
ENSLBEG00000021823	tsr1	99	54.940	ENSPTIG00000010608	TSR1	99	54.142	Panthera_tigris_altaica
ENSLBEG00000021823	tsr1	99	54.272	ENSPTRG00000008547	TSR1	99	54.031	Pan_troglodytes
ENSLBEG00000021823	tsr1	97	52.195	ENSPANG00000024463	TSR1	98	52.259	Papio_anubis
ENSLBEG00000021823	tsr1	99	71.480	ENSPKIG00000013972	tsr1	100	71.480	Paramormyrops_kingsleyae
ENSLBEG00000021823	tsr1	87	54.595	ENSPSIG00000018258	TSR1	99	53.625	Pelodiscus_sinensis
ENSLBEG00000021823	tsr1	99	81.873	ENSPMGG00000011577	tsr1	99	78.992	Periophthalmus_magnuspinnatus
ENSLBEG00000021823	tsr1	99	53.430	ENSPEMG00000018033	Tsr1	99	52.638	Peromyscus_maniculatus_bairdii
ENSLBEG00000021823	tsr1	98	55.168	ENSPCIG00000009357	TSR1	97	55.329	Phascolarctos_cinereus
ENSLBEG00000021823	tsr1	99	81.938	ENSPFOG00000004483	TSR1	100	81.938	Poecilia_formosa
ENSLBEG00000021823	tsr1	100	83.075	ENSPLAG00000022320	tsr1	100	82.837	Poecilia_latipinna
ENSLBEG00000021823	tsr1	100	82.956	ENSPMEG00000004577	tsr1	100	82.718	Poecilia_mexicana
ENSLBEG00000021823	tsr1	97	84.172	ENSPREG00000010354	tsr1	99	81.562	Poecilia_reticulata
ENSLBEG00000021823	tsr1	99	49.642	ENSPPYG00000007792	TSR1	99	50.000	Pongo_abelii
ENSLBEG00000021823	tsr1	51	67.442	ENSPCAG00000012973	-	69	67.500	Procavia_capensis
ENSLBEG00000021823	tsr1	99	55.006	ENSPCOG00000017928	TSR1	99	55.489	Propithecus_coquereli
ENSLBEG00000021823	tsr1	99	54.513	ENSPVAG00000002162	TSR1	99	54.556	Pteropus_vampyrus
ENSLBEG00000021823	tsr1	100	85.919	ENSPNYG00000016163	tsr1	100	85.322	Pundamilia_nyererei
ENSLBEG00000021823	tsr1	99	74.673	ENSPNAG00000008659	tsr1	100	74.673	Pygocentrus_nattereri
ENSLBEG00000021823	tsr1	99	54.031	ENSRNOG00000002980	Tsr1	99	53.837	Rattus_norvegicus
ENSLBEG00000021823	tsr1	97	54.878	ENSRBIG00000040016	TSR1	98	54.921	Rhinopithecus_bieti
ENSLBEG00000021823	tsr1	97	54.756	ENSRROG00000030361	TSR1	98	54.800	Rhinopithecus_roxellana
ENSLBEG00000021823	tsr1	99	54.392	ENSSBOG00000020785	TSR1	99	53.846	Saimiri_boliviensis_boliviensis
ENSLBEG00000021823	tsr1	98	55.769	ENSSHAG00000011394	TSR1	99	54.850	Sarcophilus_harrisii
ENSLBEG00000021823	tsr1	99	73.892	ENSSFOG00015005455	tsr1	100	74.012	Scleropages_formosus
ENSLBEG00000021823	tsr1	99	86.707	ENSSMAG00000009504	tsr1	100	86.946	Scophthalmus_maximus
ENSLBEG00000021823	tsr1	100	90.238	ENSSDUG00000012074	tsr1	100	90.119	Seriola_dumerili
ENSLBEG00000021823	tsr1	100	89.750	ENSSLDG00000002031	tsr1	100	89.154	Seriola_lalandi_dorsalis
ENSLBEG00000021823	tsr1	92	56.175	ENSSARG00000000759	TSR1	93	56.175	Sorex_araneus
ENSLBEG00000021823	tsr1	99	56.802	ENSSPUG00000007042	TSR1	99	56.766	Sphenodon_punctatus
ENSLBEG00000021823	tsr1	99	87.814	ENSSPAG00000021951	tsr1	100	87.814	Stegastes_partitus
ENSLBEG00000021823	tsr1	99	55.995	ENSSSCG00000038534	TSR1	99	55.276	Sus_scrofa
ENSLBEG00000021823	tsr1	89	58.753	ENSTGUG00000005883	TSR1	100	57.971	Taeniopygia_guttata
ENSLBEG00000021823	tsr1	99	82.395	ENSTRUG00000004665	tsr1	100	82.515	Takifugu_rubripes
ENSLBEG00000021823	tsr1	99	82.850	ENSTNIG00000016196	tsr1	100	83.053	Tetraodon_nigroviridis
ENSLBEG00000021823	tsr1	66	70.769	ENSTBEG00000015275	-	66	70.769	Tupaia_belangeri
ENSLBEG00000021823	tsr1	99	56.679	ENSTTRG00000001177	TSR1	99	55.875	Tursiops_truncatus
ENSLBEG00000021823	tsr1	99	54.458	ENSUAMG00000025160	TSR1	99	53.726	Ursus_americanus
ENSLBEG00000021823	tsr1	95	54.296	ENSUMAG00000009294	TSR1	98	53.383	Ursus_maritimus
ENSLBEG00000021823	tsr1	83	50.143	ENSVPAG00000000228	TSR1	99	49.360	Vicugna_pacos
ENSLBEG00000021823	tsr1	99	54.928	ENSVVUG00000021767	TSR1	99	53.325	Vulpes_vulpes
ENSLBEG00000021823	tsr1	99	51.422	ENSXETG00000023797	tsr1	100	50.324	Xenopus_tropicalis
ENSLBEG00000021823	tsr1	99	81.317	ENSXCOG00000009635	tsr1	100	80.719	Xiphophorus_couchianus
ENSLBEG00000021823	tsr1	100	81.742	ENSXMAG00000001397	tsr1	97	82.458	Xiphophorus_maculatus