EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000021832 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 4969 bases
Position: chrFKLU01003069.1:5850-10818
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000028861	DEAD	PF00270.29	2.9e-07	1	1
ENSLBEP00000028861	HA2	PF04408.23	3e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000030217	-	2196	-	ENSLBEP00000028861	731 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000021832's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000021832's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000021832	-	98	96.585	ENSLBEG00000022156	DHX15	100	96.585
ENSLBEG00000021832	-	94	90.754	ENSLBEG00000019620	dhx15	94	90.754
ENSLBEG00000021832	-	82	43.316	ENSLBEG00000023465	dhx36	57	42.473
ENSLBEG00000021832	-	88	44.277	ENSLBEG00000026364	dhx38	52	44.277
ENSLBEG00000021832	-	86	49.617	ENSLBEG00000017249	dhx16	61	49.770
ENSLBEG00000021832	-	86	50.779	ENSLBEG00000011490	dhx8	53	50.779
ENSLBEG00000021832	-	90	39.213	ENSLBEG00000022769	dhx32b	91	39.213
ENSLBEG00000021832	-	92	41.484	ENSLBEG00000006365	zgc:158828	98	41.484
ENSLBEG00000021832	-	85	45.525	ENSLBEG00000005703	dhx33	92	45.525
ENSLBEG00000021832	-	84	36.965	ENSLBEG00000025303	dhx37	62	35.540
ENSLBEG00000021832	-	91	37.377	ENSLBEG00000020503	dqx1	90	37.094
ENSLBEG00000021832	-	88	49.008	ENSLBEG00000012048	dhx8	53	49.008
ENSLBEG00000021832	-	86	39.528	ENSLBEG00000018707	dhx40	91	39.528
ENSLBEG00000021832	-	85	39.110	ENSLBEG00000025242	dhx32a	91	39.110

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000021832	-	89	35.207	ENSCING00000016347	-	93	35.398	Ciona_intestinalis
ENSLBEG00000021832	-	90	64.035	YGL120C	PRP43	89	64.035	Saccharomyces_cerevisiae
ENSLBEG00000021832	-	99	94.347	ENSXMAG00000005714	-	99	94.347	Xiphophorus_maculatus