EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000021861 (Gene tree)
Gene ID: 110004775
Gene Symbol: mrps18c (1 of many)
Alias: si:ch211-85e10.6
Full Name: 28S ribosomal protein S18c%2C mitochondrial-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 1348 bases
Position: chrFKLU01001740.1:5288-6635
Accession: 110004775
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000028864	Ribosomal_S18	PF01084.20	7.5e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000030220	-	595	XM_020660274	ENSLBEP00000028864	130 (aa)	XP_020515930	UPI0009B47E37

Gene Model

Click here to download ENSLBEG00000021861's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000021861's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000021861	mrps18c	100	100.000	ENSLBEG00000019174	mrps18c	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000021861	mrps18c	100	74.615	ENSAPOG00000019045	mrps18c	100	74.615	Acanthochromis_polyacanthus
ENSLBEG00000021861	mrps18c	68	84.270	ENSACIG00000020253	mrps18c	88	84.270	Amphilophus_citrinellus
ENSLBEG00000021861	mrps18c	100	70.000	ENSAOCG00000014338	mrps18c	100	70.000	Amphiprion_ocellaris
ENSLBEG00000021861	mrps18c	67	83.908	ENSAPEG00000023068	-	88	79.570	Amphiprion_percula
ENSLBEG00000021861	mrps18c	100	70.000	ENSAPEG00000022956	mrps18c	100	70.000	Amphiprion_percula
ENSLBEG00000021861	mrps18c	98	78.740	ENSATEG00000023417	mrps18c	98	78.740	Anabas_testudineus
ENSLBEG00000021861	mrps18c	68	65.909	ENSAPLG00000012544	-	85	65.909	Anas_platyrhynchos
ENSLBEG00000021861	mrps18c	71	86.957	ENSACLG00000010521	mrps18c	90	86.957	Astatotilapia_calliptera
ENSLBEG00000021861	mrps18c	70	82.418	ENSAMXG00000012238	mrps18c	92	82.418	Astyanax_mexicanus
ENSLBEG00000021861	mrps18c	83	62.037	ENSCPBG00000007783	-	66	62.037	Chrysemys_picta_bellii
ENSLBEG00000021861	mrps18c	88	67.544	ENSCSEG00000000711	mrps18c	93	59.406	Cynoglossus_semilaevis
ENSLBEG00000021861	mrps18c	100	66.923	ENSCVAG00000020169	mrps18c	100	66.923	Cyprinodon_variegatus
ENSLBEG00000021861	mrps18c	99	64.341	ENSDARG00000069624	mrps18c	94	64.341	Danio_rerio
ENSLBEG00000021861	mrps18c	100	65.414	ENSELUG00000024603	mrps18c	100	65.414	Esox_lucius
ENSLBEG00000021861	mrps18c	100	70.000	ENSFHEG00000018752	-	100	70.000	Fundulus_heteroclitus
ENSLBEG00000021861	mrps18c	100	70.000	ENSFHEG00000015550	mrps18c	95	70.000	Fundulus_heteroclitus
ENSLBEG00000021861	mrps18c	75	64.286	ENSGALG00000023191	MRPS18C	68	64.286	Gallus_gallus
ENSLBEG00000021861	mrps18c	100	65.385	ENSGAFG00000008048	mrps18c	83	65.385	Gambusia_affinis
ENSLBEG00000021861	mrps18c	96	53.030	ENSGAGG00000015144	-	93	53.030	Gopherus_agassizii
ENSLBEG00000021861	mrps18c	100	73.077	ENSHBUG00000002008	mrps18c	100	73.077	Haplochromis_burtoni
ENSLBEG00000021861	mrps18c	81	73.394	ENSHCOG00000013161	mrps18c	83	73.394	Hippocampus_comes
ENSLBEG00000021861	mrps18c	70	80.220	ENSIPUG00000003783	mrps18c	88	80.220	Ictalurus_punctatus
ENSLBEG00000021861	mrps18c	100	73.077	ENSKMAG00000016467	mrps18c	100	73.077	Kryptolebias_marmoratus
ENSLBEG00000021861	mrps18c	98	57.480	ENSLACG00000011243	mrps18c	99	57.480	Latimeria_chalumnae
ENSLBEG00000021861	mrps18c	88	63.478	ENSLOCG00000012115	mrps18c	85	63.478	Lepisosteus_oculatus
ENSLBEG00000021861	mrps18c	100	69.403	ENSMAMG00000012386	mrps18c	100	69.403	Mastacembelus_armatus
ENSLBEG00000021861	mrps18c	100	73.077	ENSMZEG00005023278	mrps18c	100	73.077	Maylandia_zebra
ENSLBEG00000021861	mrps18c	71	85.870	ENSMMOG00000011316	mrps18c	70	85.870	Mola_mola
ENSLBEG00000021861	mrps18c	100	73.077	ENSNBRG00000006182	mrps18c	100	73.077	Neolamprologus_brichardi
ENSLBEG00000021861	mrps18c	68	71.591	ENSMEUG00000010972	-	69	71.591	Notamacropus_eugenii
ENSLBEG00000021861	mrps18c	100	73.077	ENSONIG00000012527	mrps18c	92	83.871	Oreochromis_niloticus
ENSLBEG00000021861	mrps18c	100	73.077	ENSORLG00015006869	mrps18c	100	73.077	Oryzias_latipes_hsok
ENSLBEG00000021861	mrps18c	68	80.899	ENSOMEG00000005009	mrps18c	86	80.899	Oryzias_melastigma
ENSLBEG00000021861	mrps18c	100	61.314	ENSPKIG00000021736	mrps18c	100	61.314	Paramormyrops_kingsleyae
ENSLBEG00000021861	mrps18c	70	85.714	ENSPMGG00000002991	mrps18c	92	85.714	Periophthalmus_magnuspinnatus
ENSLBEG00000021861	mrps18c	100	66.154	ENSPFOG00000002351	mrps18c	83	66.154	Poecilia_formosa
ENSLBEG00000021861	mrps18c	100	65.385	ENSPLAG00000015187	mrps18c	100	65.385	Poecilia_latipinna
ENSLBEG00000021861	mrps18c	100	65.385	ENSPMEG00000014488	mrps18c	83	65.385	Poecilia_mexicana
ENSLBEG00000021861	mrps18c	64	78.313	ENSPREG00000012593	mrps18c	85	78.313	Poecilia_reticulata
ENSLBEG00000021861	mrps18c	100	72.308	ENSPNYG00000010654	mrps18c	100	72.308	Pundamilia_nyererei
ENSLBEG00000021861	mrps18c	98	61.417	ENSPNAG00000009350	mrps18c	93	71.000	Pygocentrus_nattereri
ENSLBEG00000021861	mrps18c	100	63.971	ENSSFOG00015019444	mrps18c	100	63.971	Scleropages_formosus
ENSLBEG00000021861	mrps18c	100	76.923	ENSSDUG00000015676	mrps18c	100	76.923	Seriola_dumerili
ENSLBEG00000021861	mrps18c	91	67.188	ENSSLDG00000002034	mrps18c	98	67.188	Seriola_lalandi_dorsalis
ENSLBEG00000021861	mrps18c	70	64.835	ENSSPUG00000013990	-	66	64.835	Sphenodon_punctatus
ENSLBEG00000021861	mrps18c	99	72.868	ENSSPAG00000008687	mrps18c	99	72.868	Stegastes_partitus
ENSLBEG00000021861	mrps18c	99	76.744	ENSTRUG00000024403	mrps18c	99	76.744	Takifugu_rubripes
ENSLBEG00000021861	mrps18c	99	77.519	ENSTNIG00000005674	mrps18c	99	77.519	Tetraodon_nigroviridis
ENSLBEG00000021861	mrps18c	69	73.333	ENSXETG00000027597	mrps18c	69	73.333	Xenopus_tropicalis
ENSLBEG00000021861	mrps18c	100	61.538	ENSXCOG00000016208	mrps18c	89	77.528	Xiphophorus_couchianus
ENSLBEG00000021861	mrps18c	100	64.615	ENSXMAG00000012555	mrps18c	83	64.615	Xiphophorus_maculatus