EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000022208 (Gene tree)
Gene ID: 109986934
Gene Symbol: sf3b1
Alias: tst|wu:fb99f09
Full Name: splicing factor 3b subunit 1
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 15150 bases
Position: chrFKLU01000107.1:711174-726323
Accession: 109986934
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000029363	SF3b1	PF08920.10	1.6e-46	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000030760	-	3927	XM_020637810	ENSLBEP00000029363	1308 (aa)	XP_020493466	-

Gene Model

Click here to download ENSLBEG00000022208's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000022208's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000022208	sf3b1	100	93.435	ENSG00000115524	SF3B1	100	93.588	Homo_sapiens
ENSLBEG00000022208	sf3b1	100	97.414	ENSAPOG00000011894	sf3b1	100	97.414	Acanthochromis_polyacanthus
ENSLBEG00000022208	sf3b1	99	93.318	ENSAMEG00000013809	SF3B1	99	93.472	Ailuropoda_melanoleuca
ENSLBEG00000022208	sf3b1	100	96.870	ENSACIG00000020910	sf3b1	97	96.870	Amphilophus_citrinellus
ENSLBEG00000022208	sf3b1	100	97.414	ENSAOCG00000004478	sf3b1	100	97.414	Amphiprion_ocellaris
ENSLBEG00000022208	sf3b1	100	97.414	ENSAPEG00000012937	sf3b1	100	97.414	Amphiprion_percula
ENSLBEG00000022208	sf3b1	100	97.565	ENSATEG00000020435	sf3b1	100	97.565	Anabas_testudineus
ENSLBEG00000022208	sf3b1	99	93.610	ENSAPLG00000003993	SF3B1	99	93.610	Anas_platyrhynchos
ENSLBEG00000022208	sf3b1	100	93.583	ENSACAG00000009612	SF3B1	100	93.583	Anolis_carolinensis
ENSLBEG00000022208	sf3b1	100	93.435	ENSANAG00000021577	SF3B1	100	95.095	Aotus_nancymaae
ENSLBEG00000022208	sf3b1	100	96.347	ENSACLG00000023470	sf3b1	100	96.347	Astatotilapia_calliptera
ENSLBEG00000022208	sf3b1	100	96.505	ENSAMXG00000002219	sf3b1	100	96.505	Astyanax_mexicanus
ENSLBEG00000022208	sf3b1	100	93.435	ENSBTAG00000008915	SF3B1	100	93.588	Bos_taurus
ENSLBEG00000022208	sf3b1	99	64.885	WBGene00011605	sftb-1	99	64.736	Caenorhabditis_elegans
ENSLBEG00000022208	sf3b1	100	93.435	ENSCJAG00000003902	SF3B1	100	93.588	Callithrix_jacchus
ENSLBEG00000022208	sf3b1	100	93.435	ENSCAFG00000010826	SF3B1	100	93.588	Canis_familiaris
ENSLBEG00000022208	sf3b1	100	93.435	ENSCAFG00020004750	SF3B1	100	93.588	Canis_lupus_dingo
ENSLBEG00000022208	sf3b1	100	93.435	ENSCHIG00000015226	SF3B1	100	93.588	Capra_hircus
ENSLBEG00000022208	sf3b1	100	93.359	ENSTSYG00000009214	SF3B1	100	93.511	Carlito_syrichta
ENSLBEG00000022208	sf3b1	99	93.262	ENSCAPG00000006547	SF3B1	99	93.415	Cavia_aperea
ENSLBEG00000022208	sf3b1	99	93.385	ENSCPOG00000009353	SF3B1	100	93.538	Cavia_porcellus
ENSLBEG00000022208	sf3b1	100	93.435	ENSCCAG00000020506	SF3B1	100	93.588	Cebus_capucinus
ENSLBEG00000022208	sf3b1	100	93.435	ENSCATG00000035735	SF3B1	100	93.588	Cercocebus_atys
ENSLBEG00000022208	sf3b1	99	93.390	ENSCLAG00000014767	SF3B1	99	93.543	Chinchilla_lanigera
ENSLBEG00000022208	sf3b1	100	93.435	ENSCSAG00000011505	SF3B1	100	93.588	Chlorocebus_sabaeus
ENSLBEG00000022208	sf3b1	76	92.360	ENSCHOG00000009860	SF3B1	76	92.360	Choloepus_hoffmanni
ENSLBEG00000022208	sf3b1	100	93.807	ENSCPBG00000021902	SF3B1	99	95.262	Chrysemys_picta_bellii
ENSLBEG00000022208	sf3b1	68	78.548	ENSCING00000002558	-	99	79.023	Ciona_intestinalis
ENSLBEG00000022208	sf3b1	99	80.272	ENSCSAVG00000002559	-	99	80.348	Ciona_savignyi
ENSLBEG00000022208	sf3b1	100	93.435	ENSCANG00000029415	SF3B1	100	93.588	Colobus_angolensis_palliatus
ENSLBEG00000022208	sf3b1	100	93.435	ENSCGRG00001016990	Sf3b1	100	93.588	Cricetulus_griseus_chok1gshd
ENSLBEG00000022208	sf3b1	100	93.435	ENSCGRG00000005301	Sf3b1	100	93.588	Cricetulus_griseus_crigri
ENSLBEG00000022208	sf3b1	100	93.817	ENSCSEG00000003860	sf3b1	100	93.817	Cynoglossus_semilaevis
ENSLBEG00000022208	sf3b1	96	97.070	ENSCVAG00000003680	sf3b1	99	97.070	Cyprinodon_variegatus
ENSLBEG00000022208	sf3b1	100	95.361	ENSDARG00000056138	sf3b1	100	95.361	Danio_rerio
ENSLBEG00000022208	sf3b1	100	93.364	ENSDNOG00000011754	SF3B1	100	93.516	Dasypus_novemcinctus
ENSLBEG00000022208	sf3b1	99	91.615	ENSDORG00000002399	Sf3b1	100	91.615	Dipodomys_ordii
ENSLBEG00000022208	sf3b1	100	75.974	FBgn0031266	Sf3b1	100	75.974	Drosophila_melanogaster
ENSLBEG00000022208	sf3b1	83	92.251	ENSETEG00000009188	SF3B1	100	92.435	Echinops_telfairi
ENSLBEG00000022208	sf3b1	99	85.977	ENSEBUG00000004325	sf3b1	100	88.648	Eptatretus_burgeri
ENSLBEG00000022208	sf3b1	100	93.435	ENSEASG00005020159	SF3B1	98	93.588	Equus_asinus_asinus
ENSLBEG00000022208	sf3b1	100	93.435	ENSECAG00000021657	SF3B1	98	93.588	Equus_caballus
ENSLBEG00000022208	sf3b1	87	100.000	ENSEEUG00000000836	SF3B1	81	100.000	Erinaceus_europaeus
ENSLBEG00000022208	sf3b1	100	95.921	ENSELUG00000005977	sf3b1	98	95.921	Esox_lucius
ENSLBEG00000022208	sf3b1	100	93.435	ENSFCAG00000005038	SF3B1	100	93.588	Felis_catus
ENSLBEG00000022208	sf3b1	99	93.533	ENSFALG00000004281	SF3B1	99	93.533	Ficedula_albicollis
ENSLBEG00000022208	sf3b1	100	93.435	ENSFDAG00000017510	SF3B1	100	93.588	Fukomys_damarensis
ENSLBEG00000022208	sf3b1	100	96.122	ENSFHEG00000014333	sf3b1	100	96.122	Fundulus_heteroclitus
ENSLBEG00000022208	sf3b1	100	96.801	ENSGMOG00000006773	sf3b1	100	96.801	Gadus_morhua
ENSLBEG00000022208	sf3b1	100	93.654	ENSGALG00000008038	SF3B1	100	93.654	Gallus_gallus
ENSLBEG00000022208	sf3b1	100	95.798	ENSGAFG00000000704	sf3b1	100	97.066	Gambusia_affinis
ENSLBEG00000022208	sf3b1	100	98.247	ENSGACG00000008839	sf3b1	100	98.247	Gasterosteus_aculeatus
ENSLBEG00000022208	sf3b1	100	93.166	ENSGAGG00000017478	SF3B1	100	93.166	Gopherus_agassizii
ENSLBEG00000022208	sf3b1	99	88.385	ENSGGOG00000009264	SF3B1	99	88.538	Gorilla_gorilla
ENSLBEG00000022208	sf3b1	99	96.344	ENSHBUG00000007705	sf3b1	100	96.344	Haplochromis_burtoni
ENSLBEG00000022208	sf3b1	99	93.390	ENSHGLG00000008285	-	99	93.543	Heterocephalus_glaber_female
ENSLBEG00000022208	sf3b1	99	91.391	ENSHGLG00100005535	-	99	91.545	Heterocephalus_glaber_male
ENSLBEG00000022208	sf3b1	100	96.672	ENSHCOG00000016775	sf3b1	100	96.672	Hippocampus_comes
ENSLBEG00000022208	sf3b1	100	96.654	ENSIPUG00000013171	sf3b1	100	96.654	Ictalurus_punctatus
ENSLBEG00000022208	sf3b1	100	93.435	ENSSTOG00000011034	SF3B1	100	93.588	Ictidomys_tridecemlineatus
ENSLBEG00000022208	sf3b1	99	93.364	ENSJJAG00000010903	Sf3b1	99	93.519	Jaculus_jaculus
ENSLBEG00000022208	sf3b1	100	96.510	ENSKMAG00000004009	sf3b1	100	96.510	Kryptolebias_marmoratus
ENSLBEG00000022208	sf3b1	99	90.527	ENSLACG00000014832	SF3B1	99	90.604	Latimeria_chalumnae
ENSLBEG00000022208	sf3b1	100	95.216	ENSLOCG00000003899	sf3b1	100	95.216	Lepisosteus_oculatus
ENSLBEG00000022208	sf3b1	100	93.435	ENSLAFG00000001956	SF3B1	100	93.588	Loxodonta_africana
ENSLBEG00000022208	sf3b1	99	93.390	ENSMMUG00000022430	SF3B1	99	93.543	Macaca_mulatta
ENSLBEG00000022208	sf3b1	100	93.435	ENSMNEG00000042333	SF3B1	100	95.095	Macaca_nemestrina
ENSLBEG00000022208	sf3b1	94	89.069	ENSMLEG00000026141	SF3B1	98	89.644	Mandrillus_leucophaeus
ENSLBEG00000022208	sf3b1	100	97.565	ENSMAMG00000010241	sf3b1	100	97.565	Mastacembelus_armatus
ENSLBEG00000022208	sf3b1	100	96.347	ENSMZEG00005021254	sf3b1	100	96.347	Maylandia_zebra
ENSLBEG00000022208	sf3b1	99	92.995	ENSMGAG00000007017	SF3B1	99	92.995	Meleagris_gallopavo
ENSLBEG00000022208	sf3b1	99	89.162	ENSMAUG00000009071	Sf3b1	99	89.316	Mesocricetus_auratus
ENSLBEG00000022208	sf3b1	100	93.435	ENSMICG00000013879	SF3B1	100	93.588	Microcebus_murinus
ENSLBEG00000022208	sf3b1	99	89.094	ENSMOCG00000000455	Sf3b1	99	89.094	Microtus_ochrogaster
ENSLBEG00000022208	sf3b1	84	97.804	ENSMMOG00000000475	sf3b1	100	97.804	Mola_mola
ENSLBEG00000022208	sf3b1	100	92.977	ENSMODG00000012275	SF3B1	100	93.130	Monodelphis_domestica
ENSLBEG00000022208	sf3b1	100	97.565	ENSMALG00000017211	sf3b1	100	97.565	Monopterus_albus
ENSLBEG00000022208	sf3b1	100	93.435	MGP_CAROLIEiJ_G0014141	Sf3b1	100	93.588	Mus_caroli
ENSLBEG00000022208	sf3b1	100	93.435	ENSMUSG00000025982	Sf3b1	100	93.588	Mus_musculus
ENSLBEG00000022208	sf3b1	100	93.435	MGP_SPRETEiJ_G0014947	Sf3b1	100	93.588	Mus_spretus
ENSLBEG00000022208	sf3b1	100	93.435	ENSMPUG00000007799	SF3B1	100	93.588	Mustela_putorius_furo
ENSLBEG00000022208	sf3b1	100	92.290	ENSMLUG00000000840	SF3B1	100	92.443	Myotis_lucifugus
ENSLBEG00000022208	sf3b1	99	93.109	ENSNGAG00000021884	-	100	93.262	Nannospalax_galili
ENSLBEG00000022208	sf3b1	100	92.372	ENSNBRG00000015816	sf3b1	100	92.372	Neolamprologus_brichardi
ENSLBEG00000022208	sf3b1	100	93.435	ENSNLEG00000006861	SF3B1	100	93.588	Nomascus_leucogenys
ENSLBEG00000022208	sf3b1	69	99.717	ENSMEUG00000015848	-	66	99.717	Notamacropus_eugenii
ENSLBEG00000022208	sf3b1	100	81.031	ENSOPRG00000008596	SF3B1	100	81.031	Ochotona_princeps
ENSLBEG00000022208	sf3b1	100	93.435	ENSODEG00000011153	-	100	93.588	Octodon_degus
ENSLBEG00000022208	sf3b1	100	96.347	ENSONIG00000013758	sf3b1	100	96.347	Oreochromis_niloticus
ENSLBEG00000022208	sf3b1	83	95.849	ENSOCUG00000012722	-	96	95.849	Oryctolagus_cuniculus
ENSLBEG00000022208	sf3b1	100	96.423	ENSORLG00000020219	sf3b1	100	96.423	Oryzias_latipes
ENSLBEG00000022208	sf3b1	100	96.423	ENSORLG00020001746	sf3b1	100	96.423	Oryzias_latipes_hni
ENSLBEG00000022208	sf3b1	64	95.346	ENSORLG00015001759	sf3b1	98	95.346	Oryzias_latipes_hsok
ENSLBEG00000022208	sf3b1	100	96.654	ENSOMEG00000019231	sf3b1	100	96.654	Oryzias_melastigma
ENSLBEG00000022208	sf3b1	100	93.435	ENSOARG00000015374	SF3B1	100	93.588	Ovis_aries
ENSLBEG00000022208	sf3b1	100	93.435	ENSPPAG00000035007	SF3B1	100	93.588	Pan_paniscus
ENSLBEG00000022208	sf3b1	100	93.435	ENSPPRG00000009090	SF3B1	100	93.588	Panthera_pardus
ENSLBEG00000022208	sf3b1	100	93.435	ENSPTIG00000021557	SF3B1	100	93.588	Panthera_tigris_altaica
ENSLBEG00000022208	sf3b1	99	86.273	ENSPTRG00000012771	SF3B1	99	86.426	Pan_troglodytes
ENSLBEG00000022208	sf3b1	100	93.435	ENSPANG00000013417	SF3B1	100	93.588	Papio_anubis
ENSLBEG00000022208	sf3b1	99	95.881	ENSPKIG00000000784	sf3b1	99	95.881	Paramormyrops_kingsleyae
ENSLBEG00000022208	sf3b1	99	92.604	ENSPSIG00000017222	SF3B1	98	92.604	Pelodiscus_sinensis
ENSLBEG00000022208	sf3b1	91	97.468	ENSPMGG00000004330	sf3b1	99	97.468	Periophthalmus_magnuspinnatus
ENSLBEG00000022208	sf3b1	99	93.390	ENSPEMG00000010699	Sf3b1	100	93.543	Peromyscus_maniculatus_bairdii
ENSLBEG00000022208	sf3b1	99	89.202	ENSPMAG00000001311	sf3b1	99	89.506	Petromyzon_marinus
ENSLBEG00000022208	sf3b1	100	93.053	ENSPCIG00000010642	SF3B1	100	93.206	Phascolarctos_cinereus
ENSLBEG00000022208	sf3b1	100	96.960	ENSPFOG00000000073	sf3b1	100	96.960	Poecilia_formosa
ENSLBEG00000022208	sf3b1	100	97.034	ENSPLAG00000002293	sf3b1	100	97.034	Poecilia_latipinna
ENSLBEG00000022208	sf3b1	100	97.034	ENSPMEG00000000446	sf3b1	98	97.034	Poecilia_mexicana
ENSLBEG00000022208	sf3b1	100	97.110	ENSPREG00000019652	sf3b1	100	97.110	Poecilia_reticulata
ENSLBEG00000022208	sf3b1	83	96.768	ENSPPYG00000013044	SF3B1	95	96.768	Pongo_abelii
ENSLBEG00000022208	sf3b1	100	93.282	ENSPCAG00000009292	SF3B1	100	93.435	Procavia_capensis
ENSLBEG00000022208	sf3b1	100	93.435	ENSPCOG00000024074	SF3B1	100	93.588	Propithecus_coquereli
ENSLBEG00000022208	sf3b1	100	93.435	ENSPVAG00000008302	SF3B1	100	93.588	Pteropus_vampyrus
ENSLBEG00000022208	sf3b1	100	96.271	ENSPNYG00000014939	sf3b1	100	96.271	Pundamilia_nyererei
ENSLBEG00000022208	sf3b1	100	95.973	ENSPNAG00000008288	sf3b1	100	95.973	Pygocentrus_nattereri
ENSLBEG00000022208	sf3b1	100	93.435	ENSRNOG00000013516	Sf3b1	100	93.588	Rattus_norvegicus
ENSLBEG00000022208	sf3b1	99	89.679	ENSRBIG00000026096	SF3B1	100	89.832	Rhinopithecus_bieti
ENSLBEG00000022208	sf3b1	100	93.435	ENSRROG00000031308	SF3B1	100	93.588	Rhinopithecus_roxellana
ENSLBEG00000022208	sf3b1	100	93.435	ENSSBOG00000020080	SF3B1	100	93.588	Saimiri_boliviensis_boliviensis
ENSLBEG00000022208	sf3b1	100	92.977	ENSSHAG00000017564	SF3B1	100	93.130	Sarcophilus_harrisii
ENSLBEG00000022208	sf3b1	100	95.589	ENSSFOG00015021535	sf3b1	100	95.589	Scleropages_formosus
ENSLBEG00000022208	sf3b1	99	97.344	ENSSMAG00000013977	sf3b1	99	97.344	Scophthalmus_maximus
ENSLBEG00000022208	sf3b1	100	97.793	ENSSDUG00000017422	sf3b1	100	97.793	Seriola_dumerili
ENSLBEG00000022208	sf3b1	100	97.869	ENSSLDG00000019495	sf3b1	100	97.869	Seriola_lalandi_dorsalis
ENSLBEG00000022208	sf3b1	75	98.592	ENSSARG00000007016	SF3B1	75	98.592	Sorex_araneus
ENSLBEG00000022208	sf3b1	100	93.578	ENSSPUG00000000410	SF3B1	100	93.578	Sphenodon_punctatus
ENSLBEG00000022208	sf3b1	100	97.336	ENSSPAG00000010451	sf3b1	99	97.336	Stegastes_partitus
ENSLBEG00000022208	sf3b1	89	95.095	ENSSSCG00000016075	SF3B1	100	95.095	Sus_scrofa
ENSLBEG00000022208	sf3b1	100	93.578	ENSTGUG00000010553	SF3B1	100	93.578	Taeniopygia_guttata
ENSLBEG00000022208	sf3b1	100	97.336	ENSTRUG00000015534	sf3b1	100	97.336	Takifugu_rubripes
ENSLBEG00000022208	sf3b1	85	97.004	ENSTBEG00000008714	SF3B1	93	97.004	Tupaia_belangeri
ENSLBEG00000022208	sf3b1	92	93.173	ENSTTRG00000003414	SF3B1	92	93.173	Tursiops_truncatus
ENSLBEG00000022208	sf3b1	94	83.580	ENSUAMG00000018506	SF3B1	99	97.571	Ursus_americanus
ENSLBEG00000022208	sf3b1	100	93.435	ENSUMAG00000020945	SF3B1	100	93.588	Ursus_maritimus
ENSLBEG00000022208	sf3b1	95	93.268	ENSVPAG00000005798	SF3B1	95	93.268	Vicugna_pacos
ENSLBEG00000022208	sf3b1	100	93.435	ENSVVUG00000025948	SF3B1	95	93.588	Vulpes_vulpes
ENSLBEG00000022208	sf3b1	100	91.985	ENSXETG00000013339	sf3b1	100	91.985	Xenopus_tropicalis
ENSLBEG00000022208	sf3b1	100	93.135	ENSXCOG00000018086	sf3b1	100	93.364	Xiphophorus_couchianus
ENSLBEG00000022208	sf3b1	100	97.186	ENSXMAG00000007369	sf3b1	100	97.304	Xiphophorus_maculatus