EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000022520 (Gene tree)
Gene ID: 109982318
Gene Symbol: hnrnpub
Alias: hnrnpu|hnrpu|wu:fa66f11|wu:fc18b08|wu:fi89c08|zgc:111835|zgc:136480
Full Name: heterogeneous nuclear ribonucleoprotein U
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 11772 bases
Position: chrFKLU01000042.1:1838080-1849851
Accession: 109982318
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000029807	SAP	PF02037.27	1.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000031195	-	1902	-	ENSLBEP00000029794	633 (aa)	-	-
ENSLBET00000031208	-	4634	XM_020631471	ENSLBEP00000029807	816 (aa)	XP_020487127	UPI0009B4383F

Gene Model

Click here to download ENSLBEG00000022520's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000022520's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000022520	hnrnpub	92	40.945	ENSLBEG00000018092	HNRNPUL1	73	44.054

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000022520	hnrnpub	87	61.194	ENSG00000153187	HNRNPU	99	66.000	Homo_sapiens
ENSLBEG00000022520	hnrnpub	100	87.638	ENSAPOG00000017400	hnrnpub	100	85.049	Acanthochromis_polyacanthus
ENSLBEG00000022520	hnrnpub	95	58.218	ENSAMEG00000009145	HNRNPU	86	56.641	Ailuropoda_melanoleuca
ENSLBEG00000022520	hnrnpub	100	82.745	ENSACIG00000012138	hnrnpub	88	79.656	Amphilophus_citrinellus
ENSLBEG00000022520	hnrnpub	100	88.617	ENSAOCG00000015843	hnrnpub	100	86.152	Amphiprion_ocellaris
ENSLBEG00000022520	hnrnpub	100	88.617	ENSAPEG00000014679	hnrnpub	100	86.152	Amphiprion_percula
ENSLBEG00000022520	hnrnpub	98	88.971	ENSATEG00000016178	hnrnpub	82	92.273	Anabas_testudineus
ENSLBEG00000022520	hnrnpub	87	69.565	ENSACAG00000004511	HNRNPU	80	58.462	Anolis_carolinensis
ENSLBEG00000022520	hnrnpub	80	57.604	ENSANAG00000033895	-	76	60.816	Aotus_nancymaae
ENSLBEG00000022520	hnrnpub	100	85.086	ENSACLG00000008165	hnrnpub	100	83.374	Astatotilapia_calliptera
ENSLBEG00000022520	hnrnpub	87	61.194	ENSBTAG00000007606	HNRNPU	82	58.667	Bos_taurus
ENSLBEG00000022520	hnrnpub	87	61.194	ENSCJAG00000016914	HNRNPU	82	58.667	Callithrix_jacchus
ENSLBEG00000022520	hnrnpub	80	57.863	ENSCAFG00020000918	HNRNPU	75	56.166	Canis_lupus_dingo
ENSLBEG00000022520	hnrnpub	80	57.251	ENSCHIG00000004900	HNRNPU	75	56.018	Capra_hircus
ENSLBEG00000022520	hnrnpub	80	58.372	ENSCPOG00000011887	HNRNPU	82	60.000	Cavia_porcellus
ENSLBEG00000022520	hnrnpub	87	61.194	ENSCCAG00000037859	-	82	58.667	Cebus_capucinus
ENSLBEG00000022520	hnrnpub	88	58.667	ENSCATG00000035273	HNRNPU	82	58.667	Cercocebus_atys
ENSLBEG00000022520	hnrnpub	87	62.687	ENSCLAG00000007100	HNRNPU	82	60.000	Chinchilla_lanigera
ENSLBEG00000022520	hnrnpub	80	57.604	ENSCSAG00000009219	HNRNPU	75	55.721	Chlorocebus_sabaeus
ENSLBEG00000022520	hnrnpub	85	78.261	ENSCHOG00000001387	HNRNPU	76	78.261	Choloepus_hoffmanni
ENSLBEG00000022520	hnrnpub	81	61.073	ENSCPBG00000009415	HNRNPU	78	59.932	Chrysemys_picta_bellii
ENSLBEG00000022520	hnrnpub	88	58.667	ENSCANG00000022780	HNRNPU	81	58.667	Colobus_angolensis_palliatus
ENSLBEG00000022520	hnrnpub	82	56.140	ENSCGRG00001020525	Hnrnpu	76	56.213	Cricetulus_griseus_chok1gshd
ENSLBEG00000022520	hnrnpub	100	76.896	ENSCSEG00000010804	hnrnpub	82	86.869	Cynoglossus_semilaevis
ENSLBEG00000022520	hnrnpub	89	80.357	ENSCVAG00000004280	hnrnpub	91	77.551	Cyprinodon_variegatus
ENSLBEG00000022520	hnrnpub	100	60.488	ENSDARG00000015206	hnrnpua	85	62.719	Danio_rerio
ENSLBEG00000022520	hnrnpub	100	61.364	ENSDARG00000004735	hnrnpub	83	62.213	Danio_rerio
ENSLBEG00000022520	hnrnpub	99	52.734	ENSDNOG00000000215	HNRNPU	88	67.213	Dasypus_novemcinctus
ENSLBEG00000022520	hnrnpub	80	58.218	ENSDORG00000015491	Hnrnpu	74	56.728	Dipodomys_ordii
ENSLBEG00000022520	hnrnpub	88	60.000	ENSETEG00000014565	HNRNPU	82	60.000	Echinops_telfairi
ENSLBEG00000022520	hnrnpub	81	57.508	ENSEASG00005003017	HNRNPU	75	55.835	Equus_asinus_asinus
ENSLBEG00000022520	hnrnpub	81	57.357	ENSECAG00000007955	HNRNPU	75	55.687	Equus_caballus
ENSLBEG00000022520	hnrnpub	100	74.416	ENSELUG00000010733	hnrnpub	100	74.292	Esox_lucius
ENSLBEG00000022520	hnrnpub	80	57.470	ENSFCAG00000002156	HNRNPU	74	56.018	Felis_catus
ENSLBEG00000022520	hnrnpub	90	80.435	ENSFDAG00000006026	HNRNPU	99	80.435	Fukomys_damarensis
ENSLBEG00000022520	hnrnpub	100	79.187	ENSFHEG00000022639	hnrnpub	100	76.859	Fundulus_heteroclitus
ENSLBEG00000022520	hnrnpub	100	72.414	ENSGMOG00000001755	hnrnpub	99	71.257	Gadus_morhua
ENSLBEG00000022520	hnrnpub	80	56.581	ENSGALG00000010671	HNRNPU	71	56.741	Gallus_gallus
ENSLBEG00000022520	hnrnpub	100	79.216	ENSGAFG00000009369	hnrnpub	83	86.023	Gambusia_affinis
ENSLBEG00000022520	hnrnpub	84	79.320	ENSGACG00000004679	hnrnpub	83	78.095	Gasterosteus_aculeatus
ENSLBEG00000022520	hnrnpub	87	61.194	ENSGGOG00000004061	HNRNPU	82	58.667	Gorilla_gorilla
ENSLBEG00000022520	hnrnpub	100	85.452	ENSHBUG00000012290	hnrnpub	100	84.963	Haplochromis_burtoni
ENSLBEG00000022520	hnrnpub	87	64.179	ENSHGLG00000010594	-	80	61.333	Heterocephalus_glaber_female
ENSLBEG00000022520	hnrnpub	91	69.492	ENSHGLG00100015093	HNRNPU	99	69.492	Heterocephalus_glaber_male
ENSLBEG00000022520	hnrnpub	100	73.484	ENSHCOG00000020091	hnrnpub	83	80.115	Hippocampus_comes
ENSLBEG00000022520	hnrnpub	77	91.489	ENSIPUG00000007749	hnrnpu	91	83.636	Ictalurus_punctatus
ENSLBEG00000022520	hnrnpub	85	83.721	ENSJJAG00000011371	Hnrnpu	83	59.459	Jaculus_jaculus
ENSLBEG00000022520	hnrnpub	100	80.532	ENSKMAG00000004532	hnrnpub	84	86.083	Kryptolebias_marmoratus
ENSLBEG00000022520	hnrnpub	92	91.667	ENSLOCG00000016652	hnrnpua	81	68.533	Lepisosteus_oculatus
ENSLBEG00000022520	hnrnpub	99	52.074	ENSLAFG00000021377	HNRNPU	82	58.667	Loxodonta_africana
ENSLBEG00000022520	hnrnpub	88	58.667	ENSMFAG00000037308	HNRNPU	82	58.667	Macaca_fascicularis
ENSLBEG00000022520	hnrnpub	80	57.604	ENSMMUG00000021098	HNRNPU	75	55.721	Macaca_mulatta
ENSLBEG00000022520	hnrnpub	88	58.667	ENSMNEG00000043645	HNRNPU	82	58.667	Macaca_nemestrina
ENSLBEG00000022520	hnrnpub	100	89.106	ENSMAMG00000007196	hnrnpub	85	92.743	Mastacembelus_armatus
ENSLBEG00000022520	hnrnpub	100	85.086	ENSMZEG00005003185	hnrnpub	100	83.374	Maylandia_zebra
ENSLBEG00000022520	hnrnpub	82	56.490	ENSMAUG00000008842	Hnrnpu	76	56.213	Mesocricetus_auratus
ENSLBEG00000022520	hnrnpub	98	48.843	ENSMICG00000004616	HNRNPU	82	58.667	Microcebus_murinus
ENSLBEG00000022520	hnrnpub	82	56.342	ENSMOCG00000015623	Hnrnpu	75	56.399	Microtus_ochrogaster
ENSLBEG00000022520	hnrnpub	86	75.000	ENSMODG00000006515	HNRNPU	79	75.000	Monodelphis_domestica
ENSLBEG00000022520	hnrnpub	96	88.408	ENSMALG00000018243	hnrnpub	99	88.408	Monopterus_albus
ENSLBEG00000022520	hnrnpub	80	57.035	MGP_CAROLIEiJ_G0014962	Hnrnpu	75	56.399	Mus_caroli
ENSLBEG00000022520	hnrnpub	80	58.218	ENSMUSG00000039630	Hnrnpu	75	56.399	Mus_musculus
ENSLBEG00000022520	hnrnpub	80	55.672	MGP_PahariEiJ_G0028193	Hnrnpu	75	56.250	Mus_pahari
ENSLBEG00000022520	hnrnpub	80	58.218	MGP_SPRETEiJ_G0015761	Hnrnpu	75	56.399	Mus_spretus
ENSLBEG00000022520	hnrnpub	87	59.701	ENSMLUG00000000475	HNRNPU	84	57.333	Myotis_lucifugus
ENSLBEG00000022520	hnrnpub	99	51.740	ENSNGAG00000019075	Hnrnpu	75	55.869	Nannospalax_galili
ENSLBEG00000022520	hnrnpub	100	85.086	ENSNBRG00000017855	hnrnpub	100	83.374	Neolamprologus_brichardi
ENSLBEG00000022520	hnrnpub	78	75.000	ENSMEUG00000000541	HNRNPU	78	75.000	Notamacropus_eugenii
ENSLBEG00000022520	hnrnpub	100	83.354	ENSONIG00000001260	hnrnpub	88	88.970	Oreochromis_niloticus
ENSLBEG00000022520	hnrnpub	85	61.194	ENSOCUG00000014469	HNRNPU	76	58.667	Oryctolagus_cuniculus
ENSLBEG00000022520	hnrnpub	100	81.785	ENSORLG00000016114	hnrnpub	85	86.502	Oryzias_latipes
ENSLBEG00000022520	hnrnpub	100	81.663	ENSORLG00020005363	hnrnpub	85	86.938	Oryzias_latipes_hni
ENSLBEG00000022520	hnrnpub	100	81.418	ENSORLG00015001190	hnrnpub	100	80.929	Oryzias_latipes_hsok
ENSLBEG00000022520	hnrnpub	100	81.174	ENSOMEG00000014951	hnrnpub	86	87.064	Oryzias_melastigma
ENSLBEG00000022520	hnrnpub	99	50.398	ENSOGAG00000014024	HNRNPU	75	56.018	Otolemur_garnettii
ENSLBEG00000022520	hnrnpub	85	78.261	ENSOARG00000004985	HNRNPU	89	59.155	Ovis_aries
ENSLBEG00000022520	hnrnpub	87	61.194	ENSPPAG00000038652	HNRNPU	82	58.667	Pan_paniscus
ENSLBEG00000022520	hnrnpub	82	56.805	ENSPPRG00000002662	HNRNPU	73	56.083	Panthera_pardus
ENSLBEG00000022520	hnrnpub	87	61.194	ENSPTRG00000002182	HNRNPU	82	58.667	Pan_troglodytes
ENSLBEG00000022520	hnrnpub	80	57.604	ENSPANG00000011643	HNRNPU	76	60.816	Papio_anubis
ENSLBEG00000022520	hnrnpub	100	67.827	ENSPKIG00000022332	hnrnpub	82	69.869	Paramormyrops_kingsleyae
ENSLBEG00000022520	hnrnpub	100	66.026	ENSPKIG00000006885	hnrnpua	81	69.051	Paramormyrops_kingsleyae
ENSLBEG00000022520	hnrnpub	86	75.000	ENSPCIG00000008657	HNRNPU	78	75.000	Phascolarctos_cinereus
ENSLBEG00000022520	hnrnpub	100	81.630	ENSPFOG00000002908	hnrnpub	100	81.873	Poecilia_formosa
ENSLBEG00000022520	hnrnpub	100	81.144	ENSPLAG00000004160	hnrnpub	100	80.976	Poecilia_latipinna
ENSLBEG00000022520	hnrnpub	99	50.228	ENSPCOG00000018655	-	82	58.667	Propithecus_coquereli
ENSLBEG00000022520	hnrnpub	99	49.294	ENSPCOG00000003883	-	77	54.896	Propithecus_coquereli
ENSLBEG00000022520	hnrnpub	87	61.194	ENSPVAG00000002581	HNRNPU	82	58.667	Pteropus_vampyrus
ENSLBEG00000022520	hnrnpub	100	85.452	ENSPNYG00000021642	hnrnpub	100	83.741	Pundamilia_nyererei
ENSLBEG00000022520	hnrnpub	100	66.150	ENSPNAG00000001055	hnrnpub	83	69.465	Pygocentrus_nattereri
ENSLBEG00000022520	hnrnpub	80	57.035	ENSRNOG00000033790	Hnrnpu	75	56.548	Rattus_norvegicus
ENSLBEG00000022520	hnrnpub	80	56.836	ENSRBIG00000031519	HNRNPU	76	59.929	Rhinopithecus_bieti
ENSLBEG00000022520	hnrnpub	82	56.930	ENSRROG00000041642	HNRNPU	76	60.885	Rhinopithecus_roxellana
ENSLBEG00000022520	hnrnpub	100	67.301	ENSSFOG00015001124	hnrnpub	82	71.698	Scleropages_formosus
ENSLBEG00000022520	hnrnpub	100	65.207	ENSSFOG00015019004	hnrnpu	80	70.407	Scleropages_formosus
ENSLBEG00000022520	hnrnpub	100	85.076	ENSSMAG00000003607	hnrnpub	82	90.086	Scophthalmus_maximus
ENSLBEG00000022520	hnrnpub	100	89.104	ENSSDUG00000005912	hnrnpub	84	92.609	Seriola_dumerili
ENSLBEG00000022520	hnrnpub	100	89.277	ENSSLDG00000004899	hnrnpub	100	86.804	Seriola_lalandi_dorsalis
ENSLBEG00000022520	hnrnpub	82	57.271	ENSSPUG00000011393	HNRNPU	79	78.723	Sphenodon_punctatus
ENSLBEG00000022520	hnrnpub	100	88.127	ENSSPAG00000011853	hnrnpub	100	85.592	Stegastes_partitus
ENSLBEG00000022520	hnrnpub	87	61.194	ENSSSCG00000010877	HNRNPU	82	58.667	Sus_scrofa
ENSLBEG00000022520	hnrnpub	100	80.579	ENSTRUG00000007759	hnrnpub	100	79.612	Takifugu_rubripes
ENSLBEG00000022520	hnrnpub	95	57.863	ENSUAMG00000021120	HNRNPU	88	56.065	Ursus_americanus
ENSLBEG00000022520	hnrnpub	100	51.395	ENSUMAG00000012322	HNRNPU	88	56.662	Ursus_maritimus
ENSLBEG00000022520	hnrnpub	81	61.194	ENSVPAG00000010520	HNRNPU	86	58.667	Vicugna_pacos
ENSLBEG00000022520	hnrnpub	80	57.863	ENSVVUG00000026524	HNRNPU	75	56.166	Vulpes_vulpes
ENSLBEG00000022520	hnrnpub	99	49.299	ENSXETG00000011386	hnrnpu	77	52.907	Xenopus_tropicalis
ENSLBEG00000022520	hnrnpub	100	80.872	ENSXMAG00000010356	hnrnpub	85	85.591	Xiphophorus_maculatus