EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000022530 (Gene tree)
Gene ID: 110005369
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein 34-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 7395 bases
Position: chrFKLU01002099.1:230-7624
Accession: 110005369
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000029788	RRM_1	PF00076.22	2.6e-27	1	2
ENSLBEP00000029788	RRM_1	PF00076.22	2.6e-27	2	2
ENSLBEP00000029774	RRM_1	PF00076.22	1.8e-23	1	2
ENSLBEP00000029774	RRM_1	PF00076.22	1.8e-23	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000031189	-	2982	XM_020660735	ENSLBEP00000029788	425 (aa)	XP_020516391	-
ENSLBET00000031175	-	3039	-	ENSLBEP00000029774	444 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000022530's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000022530's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000022530	-	100	79.059	ENSLBEG00000028305	rbm34	100	79.059

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000022530	-	84	43.052	ENSG00000188739	RBM34	84	43.052	Homo_sapiens
ENSLBEG00000022530	-	92	67.089	ENSAPOG00000004027	rbm34	92	67.089	Acanthochromis_polyacanthus
ENSLBEG00000022530	-	96	59.268	ENSACIG00000014842	rbm34	87	58.333	Amphilophus_citrinellus
ENSLBEG00000022530	-	99	70.046	ENSAOCG00000006146	rbm34	93	70.146	Amphiprion_ocellaris
ENSLBEG00000022530	-	99	70.000	ENSAPEG00000022105	rbm34	93	69.398	Amphiprion_percula
ENSLBEG00000022530	-	95	72.593	ENSATEG00000016567	rbm34	93	70.471	Anabas_testudineus
ENSLBEG00000022530	-	70	50.658	ENSAPLG00000004344	RBM34	95	49.835	Anas_platyrhynchos
ENSLBEG00000022530	-	78	45.349	ENSACAG00000001253	RBM34	79	45.797	Anolis_carolinensis
ENSLBEG00000022530	-	84	43.081	ENSANAG00000029971	RBM34	61	49.458	Aotus_nancymaae
ENSLBEG00000022530	-	99	67.586	ENSACLG00000018471	rbm34	82	65.693	Astatotilapia_calliptera
ENSLBEG00000022530	-	99	67.586	ENSACLG00000026337	rbm34	93	65.926	Astatotilapia_calliptera
ENSLBEG00000022530	-	96	49.173	ENSAMXG00000021328	rbm34	93	49.169	Astyanax_mexicanus
ENSLBEG00000022530	-	84	43.883	ENSCJAG00000018125	RBM34	87	44.149	Callithrix_jacchus
ENSLBEG00000022530	-	85	42.782	ENSCAFG00000011507	RBM34	91	40.798	Canis_familiaris
ENSLBEG00000022530	-	79	45.797	ENSTSYG00000009942	RBM34	80	44.638	Carlito_syrichta
ENSLBEG00000022530	-	63	40.659	ENSCAPG00000015346	RBM34	71	41.154	Cavia_aperea
ENSLBEG00000022530	-	81	44.789	ENSCPOG00000015213	RBM34	82	43.944	Cavia_porcellus
ENSLBEG00000022530	-	84	43.832	ENSCCAG00000025584	RBM34	88	44.357	Cebus_capucinus
ENSLBEG00000022530	-	84	43.342	ENSCATG00000031771	RBM34	89	43.081	Cercocebus_atys
ENSLBEG00000022530	-	79	44.126	ENSCLAG00000003464	RBM34	65	48.473	Chinchilla_lanigera
ENSLBEG00000022530	-	84	42.670	ENSCSAG00000010079	RBM34	88	42.408	Chlorocebus_sabaeus
ENSLBEG00000022530	-	81	44.944	ENSCPBG00000005460	RBM34	77	42.265	Chrysemys_picta_bellii
ENSLBEG00000022530	-	85	42.742	ENSCANG00000009561	RBM34	85	42.473	Colobus_angolensis_palliatus
ENSLBEG00000022530	-	84	34.699	ENSCGRG00001018721	Rbm34	92	41.729	Cricetulus_griseus_chok1gshd
ENSLBEG00000022530	-	84	39.071	ENSCGRG00000014051	Rbm34	85	38.378	Cricetulus_griseus_crigri
ENSLBEG00000022530	-	95	62.654	ENSCSEG00000000993	rbm34	92	62.069	Cynoglossus_semilaevis
ENSLBEG00000022530	-	93	55.696	ENSCVAG00000018699	rbm34	91	54.569	Cyprinodon_variegatus
ENSLBEG00000022530	-	94	52.120	ENSDARG00000101877	rbm34	98	49.367	Danio_rerio
ENSLBEG00000022530	-	81	45.225	ENSDNOG00000044740	RBM34	83	44.199	Dasypus_novemcinctus
ENSLBEG00000022530	-	61	48.689	ENSDORG00000006420	Rbm34	86	48.689	Dipodomys_ordii
ENSLBEG00000022530	-	55	49.145	ENSEBUG00000012070	rbm34	69	49.145	Eptatretus_burgeri
ENSLBEG00000022530	-	84	34.722	ENSEEUG00000012760	RBM34	62	38.722	Erinaceus_europaeus
ENSLBEG00000022530	-	92	54.756	ENSELUG00000015682	rbm34	93	54.897	Esox_lucius
ENSLBEG00000022530	-	80	45.170	ENSFCAG00000001852	RBM34	81	44.160	Felis_catus
ENSLBEG00000022530	-	72	64.379	ENSFHEG00000010140	rbm34	99	64.052	Fundulus_heteroclitus
ENSLBEG00000022530	-	51	59.535	ENSGMOG00000011683	rbm34	83	60.465	Gadus_morhua
ENSLBEG00000022530	-	53	44.348	ENSGALG00000029915	RBM34	77	42.553	Gallus_gallus
ENSLBEG00000022530	-	94	60.945	ENSGAFG00000017798	rbm34	92	59.850	Gambusia_affinis
ENSLBEG00000022530	-	95	62.319	ENSGACG00000001040	-	93	60.976	Gasterosteus_aculeatus
ENSLBEG00000022530	-	81	43.213	ENSGAGG00000020598	RBM34	82	42.737	Gopherus_agassizii
ENSLBEG00000022530	-	84	43.008	ENSGGOG00000007924	RBM34	83	44.077	Gorilla_gorilla
ENSLBEG00000022530	-	98	67.290	ENSHBUG00000015508	rbm34	93	65.926	Haplochromis_burtoni
ENSLBEG00000022530	-	80	44.193	ENSHGLG00000016495	RBM34	80	42.286	Heterocephalus_glaber_female
ENSLBEG00000022530	-	80	44.193	ENSHGLG00100014678	RBM34	80	42.286	Heterocephalus_glaber_male
ENSLBEG00000022530	-	63	50.903	ENSHCOG00000010393	rbm34	64	51.439	Hippocampus_comes
ENSLBEG00000022530	-	92	52.109	ENSIPUG00000021952	rbm34	90	51.741	Ictalurus_punctatus
ENSLBEG00000022530	-	80	45.961	ENSSTOG00000002792	RBM34	81	44.847	Ictidomys_tridecemlineatus
ENSLBEG00000022530	-	74	44.688	ENSJJAG00000021295	Rbm34	91	47.518	Jaculus_jaculus
ENSLBEG00000022530	-	95	61.765	ENSKMAG00000007790	rbm34	93	60.345	Kryptolebias_marmoratus
ENSLBEG00000022530	-	79	48.276	ENSLACG00000013628	RBM34	81	45.682	Latimeria_chalumnae
ENSLBEG00000022530	-	93	48.210	ENSLOCG00000015902	rbm34	82	51.070	Lepisosteus_oculatus
ENSLBEG00000022530	-	85	44.032	ENSLAFG00000014289	RBM34	84	44.357	Loxodonta_africana
ENSLBEG00000022530	-	84	44.142	ENSMFAG00000038522	RBM34	85	43.869	Macaca_fascicularis
ENSLBEG00000022530	-	84	44.142	ENSMMUG00000039424	RBM34	88	43.869	Macaca_mulatta
ENSLBEG00000022530	-	84	44.142	ENSMNEG00000040149	RBM34	85	43.869	Macaca_nemestrina
ENSLBEG00000022530	-	94	71.324	ENSMAMG00000018828	rbm34	93	70.343	Mastacembelus_armatus
ENSLBEG00000022530	-	61	67.153	ENSMZEG00005010091	-	86	68.127	Maylandia_zebra
ENSLBEG00000022530	-	98	67.523	ENSMZEG00005021586	rbm34	93	65.679	Maylandia_zebra
ENSLBEG00000022530	-	94	45.025	ENSMGAG00000011921	RBM34	94	43.829	Meleagris_gallopavo
ENSLBEG00000022530	-	87	40.751	ENSMICG00000038704	-	87	39.410	Microcebus_murinus
ENSLBEG00000022530	-	84	43.207	ENSMOCG00000013550	Rbm34	85	42.663	Microtus_ochrogaster
ENSLBEG00000022530	-	100	64.896	ENSMMOG00000018675	rbm34	94	65.207	Mola_mola
ENSLBEG00000022530	-	79	42.407	ENSMODG00000008436	RBM34	79	41.061	Monodelphis_domestica
ENSLBEG00000022530	-	94	63.902	ENSMALG00000007816	rbm34	93	61.871	Monopterus_albus
ENSLBEG00000022530	-	80	44.875	MGP_CAROLIEiJ_G0031732	Rbm34	86	43.316	Mus_caroli
ENSLBEG00000022530	-	83	43.360	ENSMUSG00000033931	Rbm34	83	42.818	Mus_musculus
ENSLBEG00000022530	-	81	45.480	MGP_PahariEiJ_G0023329	Rbm34	81	45.070	Mus_pahari
ENSLBEG00000022530	-	79	44.034	MGP_SPRETEiJ_G0032849	Rbm34	79	43.466	Mus_spretus
ENSLBEG00000022530	-	81	43.785	ENSMPUG00000002849	RBM34	81	43.750	Mustela_putorius_furo
ENSLBEG00000022530	-	84	42.480	ENSMLUG00000016224	RBM34	84	41.755	Myotis_lucifugus
ENSLBEG00000022530	-	84	43.836	ENSNGAG00000010712	Rbm34	85	43.407	Nannospalax_galili
ENSLBEG00000022530	-	99	62.645	ENSNBRG00000010975	rbm34	93	62.315	Neolamprologus_brichardi
ENSLBEG00000022530	-	84	42.298	ENSNLEG00000002610	RBM34	83	43.370	Nomascus_leucogenys
ENSLBEG00000022530	-	62	43.726	ENSMEUG00000005465	-	85	43.750	Notamacropus_eugenii
ENSLBEG00000022530	-	80	44.602	ENSODEG00000006130	RBM34	88	44.509	Octodon_degus
ENSLBEG00000022530	-	98	66.355	ENSONIG00000018121	rbm34	91	65.432	Oreochromis_niloticus
ENSLBEG00000022530	-	79	44.126	ENSOANG00000001206	RBM34	80	44.380	Ornithorhynchus_anatinus
ENSLBEG00000022530	-	84	43.766	ENSOCUG00000009173	RBM34	89	43.766	Oryctolagus_cuniculus
ENSLBEG00000022530	-	94	62.531	ENSORLG00000001221	rbm34	93	61.845	Oryzias_latipes
ENSLBEG00000022530	-	94	62.035	ENSORLG00020016678	rbm34	93	62.594	Oryzias_latipes_hni
ENSLBEG00000022530	-	94	61.538	ENSORLG00015016039	rbm34	93	60.848	Oryzias_latipes_hsok
ENSLBEG00000022530	-	95	62.624	ENSOMEG00000007902	rbm34	93	61.097	Oryzias_melastigma
ENSLBEG00000022530	-	86	40.100	ENSOGAG00000012470	RBM34	89	39.401	Otolemur_garnettii
ENSLBEG00000022530	-	84	43.478	ENSPPAG00000030692	RBM34	84	43.207	Pan_paniscus
ENSLBEG00000022530	-	80	46.023	ENSPPRG00000013597	RBM34	81	43.305	Panthera_pardus
ENSLBEG00000022530	-	80	45.739	ENSPTIG00000011612	RBM34	81	43.020	Panthera_tigris_altaica
ENSLBEG00000022530	-	84	43.869	ENSPTRG00000048646	-	84	43.869	Pan_troglodytes
ENSLBEG00000022530	-	84	43.869	ENSPTRG00000032432	RBM34	84	43.869	Pan_troglodytes
ENSLBEG00000022530	-	84	43.342	ENSPANG00000010411	RBM34	88	43.081	Papio_anubis
ENSLBEG00000022530	-	94	51.825	ENSPKIG00000009284	rbm34	91	49.644	Paramormyrops_kingsleyae
ENSLBEG00000022530	-	80	42.541	ENSPSIG00000011370	RBM34	80	42.210	Pelodiscus_sinensis
ENSLBEG00000022530	-	72	50.968	ENSPMGG00000001183	rbm34	68	58.333	Periophthalmus_magnuspinnatus
ENSLBEG00000022530	-	84	44.809	ENSPEMG00000000265	Rbm34	85	44.536	Peromyscus_maniculatus_bairdii
ENSLBEG00000022530	-	76	46.377	ENSPMAG00000001602	rbm34	84	46.584	Petromyzon_marinus
ENSLBEG00000022530	-	94	39.243	ENSPCIG00000029736	-	53	45.745	Phascolarctos_cinereus
ENSLBEG00000022530	-	93	62.563	ENSPFOG00000009829	-	91	61.616	Poecilia_formosa
ENSLBEG00000022530	-	93	62.563	ENSPLAG00000018385	-	90	61.616	Poecilia_latipinna
ENSLBEG00000022530	-	93	54.156	ENSPMEG00000014440	-	91	53.165	Poecilia_mexicana
ENSLBEG00000022530	-	93	61.250	ENSPREG00000023227	rbm34	92	59.352	Poecilia_reticulata
ENSLBEG00000022530	-	84	42.820	ENSPPYG00000029513	RBM34	84	43.869	Pongo_abelii
ENSLBEG00000022530	-	84	41.667	ENSPCOG00000018448	RBM34	87	39.737	Propithecus_coquereli
ENSLBEG00000022530	-	79	44.477	ENSPVAG00000015158	RBM34	85	43.132	Pteropus_vampyrus
ENSLBEG00000022530	-	98	67.925	ENSPNYG00000004970	rbm34	93	66.334	Pundamilia_nyererei
ENSLBEG00000022530	-	92	53.218	ENSPNAG00000002639	rbm34	90	53.250	Pygocentrus_nattereri
ENSLBEG00000022530	-	81	44.507	ENSRNOG00000020004	Rbm34	82	42.817	Rattus_norvegicus
ENSLBEG00000022530	-	84	42.820	ENSRBIG00000032900	RBM34	88	42.559	Rhinopithecus_bieti
ENSLBEG00000022530	-	84	42.820	ENSRROG00000039131	RBM34	88	42.559	Rhinopithecus_roxellana
ENSLBEG00000022530	-	85	41.299	ENSSHAG00000015812	RBM34	87	39.950	Sarcophilus_harrisii
ENSLBEG00000022530	-	92	51.250	ENSSFOG00015000148	rbm34	77	54.655	Scleropages_formosus
ENSLBEG00000022530	-	99	71.034	ENSSMAG00000020955	rbm34	94	71.429	Scophthalmus_maximus
ENSLBEG00000022530	-	99	73.832	ENSSDUG00000019237	rbm34	93	73.645	Seriola_dumerili
ENSLBEG00000022530	-	99	68.837	ENSSLDG00000000796	rbm34	93	67.892	Seriola_lalandi_dorsalis
ENSLBEG00000022530	-	96	41.106	ENSSPUG00000015430	RBM34	81	44.167	Sphenodon_punctatus
ENSLBEG00000022530	-	98	68.483	ENSSPAG00000010174	rbm34	93	67.750	Stegastes_partitus
ENSLBEG00000022530	-	95	59.559	ENSTRUG00000011172	rbm34	97	59.113	Takifugu_rubripes
ENSLBEG00000022530	-	94	49.762	ENSTNIG00000001302	-	92	51.977	Tetraodon_nigroviridis
ENSLBEG00000022530	-	80	48.830	ENSXETG00000023721	rbm34	94	46.115	Xenopus_tropicalis
ENSLBEG00000022530	-	93	53.788	ENSXCOG00000011190	RBM34	93	52.405	Xiphophorus_couchianus
ENSLBEG00000022530	-	93	62.469	ENSXMAG00000029852	rbm34	91	61.364	Xiphophorus_maculatus