EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000022720 (Gene tree)
Gene ID: 109987822
Gene Symbol: -
Alias: -
Full Name: ataxin-2-like protein
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 13663 bases
Position: chrFKLU01000006.1:475750-489412
Accession: 109987822
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000030036	PAM2	PF07145.15	2.1e-05	1	1
ENSLBEP00000030036	LsmAD	PF06741.13	2.2e-17	1	1
ENSLBEP00000030036	SM-ATX	PF14438.6	1.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000031441	-	6537	XM_020639067	ENSLBEP00000030036	1046 (aa)	XP_020494723	UPI0009B46405

Gene Model

Click here to download ENSLBEG00000022720's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000022720's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000022720	-	78	56.952	ENSLBEG00000006525	atxn2l	69	65.468

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000022720	-	95	42.433	ENSG00000168488	ATXN2L	100	61.000	Homo_sapiens
ENSLBEG00000022720	-	100	84.615	ENSAPOG00000021412	-	100	83.583	Acanthochromis_polyacanthus
ENSLBEG00000022720	-	80	80.296	ENSACIG00000014731	-	98	80.430	Amphilophus_citrinellus
ENSLBEG00000022720	-	92	48.947	ENSACIG00000024435	atxn2l	69	64.000	Amphilophus_citrinellus
ENSLBEG00000022720	-	88	86.034	ENSAOCG00000002581	-	100	84.861	Amphiprion_ocellaris
ENSLBEG00000022720	-	100	86.585	ENSAPEG00000011038	-	100	85.553	Amphiprion_percula
ENSLBEG00000022720	-	100	85.580	ENSATEG00000019382	-	100	85.485	Anabas_testudineus
ENSLBEG00000022720	-	100	82.739	ENSACLG00000009975	-	100	81.614	Astatotilapia_calliptera
ENSLBEG00000022720	-	89	58.065	ENSAMXG00000003332	atxn2l	80	58.065	Astyanax_mexicanus
ENSLBEG00000022720	-	97	61.706	ENSAMXG00000020362	-	100	58.834	Astyanax_mexicanus
ENSLBEG00000022720	-	93	42.036	ENSCPOG00000010521	ATXN2L	66	62.452	Cavia_porcellus
ENSLBEG00000022720	-	93	42.105	ENSCLAG00000016117	ATXN2L	66	62.452	Chinchilla_lanigera
ENSLBEG00000022720	-	91	40.541	ENSCGRG00000001500	Atxn2l	63	62.069	Cricetulus_griseus_crigri
ENSLBEG00000022720	-	57	81.095	ENSCSEG00000008530	-	96	82.587	Cynoglossus_semilaevis
ENSLBEG00000022720	-	98	79.942	ENSCVAG00000015825	-	100	79.653	Cyprinodon_variegatus
ENSLBEG00000022720	-	95	41.446	ENSEASG00005014992	ATXN2L	68	63.004	Equus_asinus_asinus
ENSLBEG00000022720	-	87	68.017	ENSELUG00000022915	-	91	66.738	Esox_lucius
ENSLBEG00000022720	-	71	66.448	ENSFHEG00000004491	-	84	71.821	Fundulus_heteroclitus
ENSLBEG00000022720	-	98	67.345	ENSGMOG00000006016	-	61	70.540	Gadus_morhua
ENSLBEG00000022720	-	56	64.167	ENSGMOG00000000316	atxn2l	63	64.167	Gadus_morhua
ENSLBEG00000022720	-	69	78.078	ENSGAFG00000019364	-	99	76.391	Gambusia_affinis
ENSLBEG00000022720	-	98	81.579	ENSGACG00000007446	-	100	80.799	Gasterosteus_aculeatus
ENSLBEG00000022720	-	97	40.054	ENSGAGG00000006078	ATXN2L	58	57.807	Gopherus_agassizii
ENSLBEG00000022720	-	93	34.517	ENSGGOG00000036669	-	63	51.111	Gorilla_gorilla
ENSLBEG00000022720	-	100	82.552	ENSHBUG00000007997	-	100	81.426	Haplochromis_burtoni
ENSLBEG00000022720	-	80	85.583	ENSHCOG00000017587	-	99	85.583	Hippocampus_comes
ENSLBEG00000022720	-	79	39.667	ENSSTOG00000011807	ATXN2L	59	63.529	Ictidomys_tridecemlineatus
ENSLBEG00000022720	-	93	41.450	ENSJJAG00000005629	Atxn2l	62	62.452	Jaculus_jaculus
ENSLBEG00000022720	-	98	80.654	ENSKMAG00000021450	-	100	79.672	Kryptolebias_marmoratus
ENSLBEG00000022720	-	100	82.596	ENSMAMG00000013005	-	100	81.750	Mastacembelus_armatus
ENSLBEG00000022720	-	100	82.739	ENSMZEG00005013869	-	100	81.614	Maylandia_zebra
ENSLBEG00000022720	-	95	40.888	ENSMOCG00000020882	Atxn2l	63	62.452	Microtus_ochrogaster
ENSLBEG00000022720	-	83	82.687	ENSMALG00000008430	-	74	90.406	Monopterus_albus
ENSLBEG00000022720	-	95	42.051	MGP_CAROLIEiJ_G0030450	Atxn2l	75	65.896	Mus_caroli
ENSLBEG00000022720	-	95	42.105	ENSMUSG00000032637	Atxn2l	75	65.896	Mus_musculus
ENSLBEG00000022720	-	95	40.871	MGP_PahariEiJ_G0013660	Atxn2l	63	62.452	Mus_pahari
ENSLBEG00000022720	-	95	42.199	MGP_SPRETEiJ_G0031564	Atxn2l	75	65.896	Mus_spretus
ENSLBEG00000022720	-	88	40.402	ENSNGAG00000021446	Atxn2l	63	62.069	Nannospalax_galili
ENSLBEG00000022720	-	59	45.977	ENSNLEG00000033414	-	63	45.594	Nomascus_leucogenys
ENSLBEG00000022720	-	98	82.534	ENSONIG00000011478	-	100	81.094	Oreochromis_niloticus
ENSLBEG00000022720	-	100	79.624	ENSORLG00000006059	-	100	79.718	Oryzias_latipes
ENSLBEG00000022720	-	100	79.343	ENSORLG00020000991	-	100	79.531	Oryzias_latipes_hni
ENSLBEG00000022720	-	100	79.624	ENSORLG00015014174	-	100	79.624	Oryzias_latipes_hsok
ENSLBEG00000022720	-	100	80.000	ENSOMEG00000021118	-	100	79.624	Oryzias_melastigma
ENSLBEG00000022720	-	93	36.417	ENSPPAG00000036236	-	94	52.490	Pan_paniscus
ENSLBEG00000022720	-	81	76.393	ENSPMGG00000014821	-	100	75.066	Periophthalmus_magnuspinnatus
ENSLBEG00000022720	-	98	79.596	ENSPFOG00000005935	-	100	78.357	Poecilia_formosa
ENSLBEG00000022720	-	98	79.692	ENSPLAG00000017094	-	100	78.454	Poecilia_latipinna
ENSLBEG00000022720	-	98	79.596	ENSPMEG00000017227	-	100	78.357	Poecilia_mexicana
ENSLBEG00000022720	-	98	80.269	ENSPREG00000023090	-	100	78.861	Poecilia_reticulata
ENSLBEG00000022720	-	88	34.898	ENSPPYG00000017765	-	53	57.037	Pongo_abelii
ENSLBEG00000022720	-	93	42.245	ENSPCOG00000024791	ATXN2L	59	62.637	Propithecus_coquereli
ENSLBEG00000022720	-	100	82.739	ENSPNYG00000017058	-	100	81.614	Pundamilia_nyererei
ENSLBEG00000022720	-	82	55.989	ENSPNYG00000012482	atxn2l	73	62.718	Pundamilia_nyererei
ENSLBEG00000022720	-	75	64.898	ENSRBIG00000036712	ATXN2L	61	65.833	Rhinopithecus_bieti
ENSLBEG00000022720	-	100	57.767	ENSSFOG00015001018	atxn2l	99	55.877	Scleropages_formosus
ENSLBEG00000022720	-	78	52.919	ENSSMAG00000016365	atxn2l	60	43.869	Scophthalmus_maximus
ENSLBEG00000022720	-	100	85.822	ENSSMAG00000016932	-	100	85.728	Scophthalmus_maximus
ENSLBEG00000022720	-	98	87.584	ENSSDUG00000023014	-	99	86.044	Seriola_dumerili
ENSLBEG00000022720	-	83	94.275	ENSSLDG00000017701	-	98	94.275	Seriola_lalandi_dorsalis
ENSLBEG00000022720	-	100	84.659	ENSSPAG00000008174	-	100	84.097	Stegastes_partitus
ENSLBEG00000022720	-	100	82.453	ENSTRUG00000007132	-	100	80.849	Takifugu_rubripes
ENSLBEG00000022720	-	98	81.207	ENSTNIG00000018942	-	100	80.039	Tetraodon_nigroviridis
ENSLBEG00000022720	-	95	39.845	ENSUMAG00000009437	ATXN2L	77	62.963	Ursus_maritimus
ENSLBEG00000022720	-	79	78.772	ENSXCOG00000001128	-	99	77.238	Xiphophorus_couchianus
ENSLBEG00000022720	-	98	78.119	ENSXMAG00000010133	-	100	77.863	Xiphophorus_maculatus