EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000022915 (Gene tree)
Gene ID: -
Gene Symbol: smarcal1 (1 of many)
Alias: im:7145331|si:ch211-239d11.1
Full Name: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 9980 bases
Position: chrFKLU01003091.1:9826-19805
Accession: 109975320
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000030422	ResIII	PF04851.15	1.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000031831	-	2301	XM_020625776	ENSLBEP00000030422	766 (aa)	XP_020481432	-

Gene Model

Click here to download ENSLBEG00000022915's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000022915's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000022915	smarcal1	97	100.000	ENSLBEG00000003493	smarcal1	88	97.025

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000022915	smarcal1	85	59.847	ENSG00000138375	SMARCAL1	99	65.839	Homo_sapiens
ENSLBEG00000022915	smarcal1	100	84.499	ENSAPOG00000020156	SMARCAL1	89	84.499	Acanthochromis_polyacanthus
ENSLBEG00000022915	smarcal1	99	81.389	ENSACIG00000001500	smarcal1	97	81.389	Amphilophus_citrinellus
ENSLBEG00000022915	smarcal1	100	83.516	ENSAOCG00000014266	SMARCAL1	88	83.516	Amphiprion_ocellaris
ENSLBEG00000022915	smarcal1	100	84.341	ENSAPEG00000015861	SMARCAL1	86	88.360	Amphiprion_percula
ENSLBEG00000022915	smarcal1	99	83.175	ENSATEG00000020624	SMARCAL1	84	83.379	Anabas_testudineus
ENSLBEG00000022915	smarcal1	92	61.135	ENSAPLG00000009864	SMARCAL1	71	61.190	Anas_platyrhynchos
ENSLBEG00000022915	smarcal1	91	60.649	ENSACAG00000004612	SMARCAL1	71	61.429	Anolis_carolinensis
ENSLBEG00000022915	smarcal1	100	82.249	ENSACLG00000015990	SMARCAL1	93	82.361	Astatotilapia_calliptera
ENSLBEG00000022915	smarcal1	93	71.627	ENSAMXG00000003350	smarcal1	80	71.627	Astyanax_mexicanus
ENSLBEG00000022915	smarcal1	87	62.462	ENSCPBG00000013599	SMARCAL1	67	62.462	Chrysemys_picta_bellii
ENSLBEG00000022915	smarcal1	83	46.812	ENSCING00000009308	-	100	46.812	Ciona_intestinalis
ENSLBEG00000022915	smarcal1	100	79.972	ENSCSEG00000010785	SMARCAL1	96	79.972	Cynoglossus_semilaevis
ENSLBEG00000022915	smarcal1	95	79.150	ENSCVAG00000018780	SMARCAL1	81	79.150	Cyprinodon_variegatus
ENSLBEG00000022915	smarcal1	69	53.232	ENSEBUG00000011906	SMARCAL1	99	49.088	Eptatretus_burgeri
ENSLBEG00000022915	smarcal1	86	75.455	ENSELUG00000010440	-	68	72.230	Esox_lucius
ENSLBEG00000022915	smarcal1	87	61.619	ENSFALG00000003981	SMARCAL1	69	61.619	Ficedula_albicollis
ENSLBEG00000022915	smarcal1	100	72.410	ENSFHEG00000008380	SMARCAL1	93	72.410	Fundulus_heteroclitus
ENSLBEG00000022915	smarcal1	78	74.941	ENSGMOG00000010034	smarcal1	99	74.941	Gadus_morhua
ENSLBEG00000022915	smarcal1	96	57.415	ENSGALG00000011475	RPL37A	75	57.415	Gallus_gallus
ENSLBEG00000022915	smarcal1	93	82.617	ENSGACG00000006073	SMARCAL1	100	85.661	Gasterosteus_aculeatus
ENSLBEG00000022915	smarcal1	86	62.974	ENSGAGG00000015660	SMARCAL1	72	62.369	Gopherus_agassizii
ENSLBEG00000022915	smarcal1	100	81.978	ENSHBUG00000002973	smarcal1	93	81.978	Haplochromis_burtoni
ENSLBEG00000022915	smarcal1	100	71.726	ENSHCOG00000017921	smarcal1	96	71.726	Hippocampus_comes
ENSLBEG00000022915	smarcal1	99	77.089	ENSKMAG00000012023	SMARCAL1	96	77.089	Kryptolebias_marmoratus
ENSLBEG00000022915	smarcal1	95	55.540	ENSLACG00000010974	SMARCAL1	76	55.902	Latimeria_chalumnae
ENSLBEG00000022915	smarcal1	88	72.404	ENSLOCG00000009637	smarcal1	79	72.404	Lepisosteus_oculatus
ENSLBEG00000022915	smarcal1	100	80.364	ENSMAMG00000000828	SMARCAL1	95	80.364	Mastacembelus_armatus
ENSLBEG00000022915	smarcal1	100	82.114	ENSMZEG00005007660	SMARCAL1	93	82.225	Maylandia_zebra
ENSLBEG00000022915	smarcal1	92	59.494	ENSMGAG00000011658	SMARCAL1	75	59.494	Meleagris_gallopavo
ENSLBEG00000022915	smarcal1	99	76.834	ENSMMOG00000003842	smarcal1	95	76.834	Mola_mola
ENSLBEG00000022915	smarcal1	89	58.806	ENSMODG00000015544	SMARCAL1	71	58.806	Monodelphis_domestica
ENSLBEG00000022915	smarcal1	99	81.127	ENSNBRG00000016273	smarcal1	98	81.127	Neolamprologus_brichardi
ENSLBEG00000022915	smarcal1	82	61.514	ENSMEUG00000004395	SMARCAL1	74	60.638	Notamacropus_eugenii
ENSLBEG00000022915	smarcal1	100	82.585	ENSONIG00000009036	smarcal1	96	84.323	Oreochromis_niloticus
ENSLBEG00000022915	smarcal1	99	72.236	ENSORLG00000016455	SMARCAL1	92	72.236	Oryzias_latipes
ENSLBEG00000022915	smarcal1	99	72.356	ENSORLG00020001610	SMARCAL1	92	72.356	Oryzias_latipes_hni
ENSLBEG00000022915	smarcal1	99	71.394	ENSORLG00015001865	SMARCAL1	92	71.394	Oryzias_latipes_hsok
ENSLBEG00000022915	smarcal1	99	75.281	ENSOMEG00000001845	smarcal1	92	75.281	Oryzias_melastigma
ENSLBEG00000022915	smarcal1	98	72.996	ENSPMGG00000019092	SMARCAL1	81	79.339	Periophthalmus_magnuspinnatus
ENSLBEG00000022915	smarcal1	87	59.009	ENSPCIG00000022514	SMARCAL1	72	59.877	Phascolarctos_cinereus
ENSLBEG00000022915	smarcal1	100	71.309	ENSPFOG00000000560	SMARCAL1	81	78.933	Poecilia_formosa
ENSLBEG00000022915	smarcal1	100	71.309	ENSPMEG00000018146	SMARCAL1	81	78.933	Poecilia_mexicana
ENSLBEG00000022915	smarcal1	61	85.912	ENSPREG00000009591	SMARCAL1	85	85.912	Poecilia_reticulata
ENSLBEG00000022915	smarcal1	99	67.115	ENSPNAG00000014900	smarcal1	88	67.115	Pygocentrus_nattereri
ENSLBEG00000022915	smarcal1	85	56.753	ENSSHAG00000013538	SMARCAL1	71	56.753	Sarcophilus_harrisii
ENSLBEG00000022915	smarcal1	100	82.568	ENSSMAG00000010427	SMARCAL1	84	82.568	Scophthalmus_maximus
ENSLBEG00000022915	smarcal1	100	84.750	ENSSDUG00000017470	SMARCAL1	84	84.750	Seriola_dumerili
ENSLBEG00000022915	smarcal1	100	84.615	ENSSLDG00000007224	SMARCAL1	90	84.615	Seriola_lalandi_dorsalis
ENSLBEG00000022915	smarcal1	86	64.795	ENSSPUG00000015369	SMARCAL1	65	64.795	Sphenodon_punctatus
ENSLBEG00000022915	smarcal1	99	81.386	ENSSPAG00000003742	smarcal1	99	81.386	Stegastes_partitus
ENSLBEG00000022915	smarcal1	85	56.355	ENSSSCG00000035501	SMARCAL1	72	56.662	Sus_scrofa
ENSLBEG00000022915	smarcal1	85	60.522	ENSTGUG00000005079	SMARCAL1	95	60.522	Taeniopygia_guttata
ENSLBEG00000022915	smarcal1	99	66.087	ENSTRUG00000010701	SMARCAL1	92	66.087	Takifugu_rubripes
ENSLBEG00000022915	smarcal1	99	49.925	ENSTTRG00000009001	SMARCAL1	92	50.151	Tursiops_truncatus
ENSLBEG00000022915	smarcal1	93	62.325	ENSXETG00000000465	smarcal1	73	62.325	Xenopus_tropicalis