EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000022930 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 3459 bases
Position: chrFKLU01001007.1:77988-81446
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000030415	RVT_1	PF00078.27	1.8e-38	1	1
ENSLBEP00000030415	Exo_endo_phos	PF03372.23	5.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000031823	-	3459	-	ENSLBEP00000030415	823 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000022930's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000022930's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000022930	-	94	98.842	ENSLBEG00000008483	-	59	98.842
ENSLBEG00000022930	-	66	46.069	ENSLBEG00000011646	-	57	46.069
ENSLBEG00000022930	-	94	98.842	ENSLBEG00000012182	-	59	98.842
ENSLBEG00000022930	-	94	97.040	ENSLBEG00000007872	-	59	97.040
ENSLBEG00000022930	-	94	98.842	ENSLBEG00000008569	-	76	98.842
ENSLBEG00000022930	-	94	98.713	ENSLBEG00000007968	-	59	98.713
ENSLBEG00000022930	-	90	41.949	ENSLBEG00000029018	-	64	41.949
ENSLBEG00000022930	-	71	43.151	ENSLBEG00000008622	-	59	43.151

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000022930	-	93	45.443	ENSATEG00000021554	-	58	45.443	Anabas_testudineus
ENSLBEG00000022930	-	93	48.765	ENSAMXG00000037575	-	71	48.701	Astyanax_mexicanus
ENSLBEG00000022930	-	93	43.467	ENSDARG00000098779	BX547930.4	58	43.320	Danio_rerio
ENSLBEG00000022930	-	93	45.478	ENSDARG00000101795	CABZ01033394.1	58	45.478	Danio_rerio
ENSLBEG00000022930	-	93	42.283	ENSDARG00000105157	BX649434.3	57	42.283	Danio_rerio
ENSLBEG00000022930	-	93	50.587	ENSDARG00000100303	CU638714.1	58	50.587	Danio_rerio
ENSLBEG00000022930	-	93	40.314	ENSGMOG00000001470	-	59	40.445	Gadus_morhua
ENSLBEG00000022930	-	93	42.578	ENSGACG00000000122	-	57	42.578	Gasterosteus_aculeatus
ENSLBEG00000022930	-	93	43.286	ENSKMAG00000017599	-	86	43.286	Kryptolebias_marmoratus
ENSLBEG00000022930	-	54	30.201	ENSLOCG00000000597	-	97	30.464	Lepisosteus_oculatus
ENSLBEG00000022930	-	93	31.726	ENSORLG00000022718	-	62	31.726	Oryzias_latipes
ENSLBEG00000022930	-	93	31.599	ENSORLG00000024817	-	81	31.599	Oryzias_latipes
ENSLBEG00000022930	-	93	55.802	ENSORLG00000024845	-	58	55.802	Oryzias_latipes
ENSLBEG00000022930	-	72	44.444	ENSORLG00000024114	-	53	44.444	Oryzias_latipes
ENSLBEG00000022930	-	93	31.726	ENSORLG00000021884	-	61	31.726	Oryzias_latipes
ENSLBEG00000022930	-	93	31.980	ENSORLG00000024361	-	62	31.980	Oryzias_latipes
ENSLBEG00000022930	-	72	30.821	ENSORLG00000026865	-	55	30.821	Oryzias_latipes
ENSLBEG00000022930	-	93	56.193	ENSORLG00020022348	-	58	56.193	Oryzias_latipes_hni
ENSLBEG00000022930	-	89	31.926	ENSORLG00015019816	-	59	31.926	Oryzias_latipes_hsok
ENSLBEG00000022930	-	90	31.765	ENSORLG00015014452	-	60	31.765	Oryzias_latipes_hsok
ENSLBEG00000022930	-	93	31.599	ENSORLG00015019437	-	78	31.599	Oryzias_latipes_hsok
ENSLBEG00000022930	-	95	30.446	ENSORLG00015007330	-	63	30.446	Oryzias_latipes_hsok
ENSLBEG00000022930	-	94	51.799	ENSOMEG00000013951	-	58	52.202	Oryzias_melastigma
ENSLBEG00000022930	-	93	44.141	ENSSDUG00000006191	-	58	44.141	Seriola_dumerili
ENSLBEG00000022930	-	93	41.536	ENSXMAG00000024932	-	58	41.536	Xiphophorus_maculatus
ENSLBEG00000022930	-	93	43.490	ENSXMAG00000028372	-	59	43.490	Xiphophorus_maculatus
ENSLBEG00000022930	-	93	42.839	ENSXMAG00000028545	-	59	42.839	Xiphophorus_maculatus
ENSLBEG00000022930	-	93	41.667	ENSXMAG00000025449	-	58	41.667	Xiphophorus_maculatus