EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000022939 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 3177 bases
Position: chrFKLU01000155.1:637952-641128
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000030376	zf-C2H2	PF00096.26	4.3e-16	1	3
ENSLBEP00000030376	zf-C2H2	PF00096.26	4.3e-16	2	3
ENSLBEP00000030376	zf-C2H2	PF00096.26	4.3e-16	3	3
ENSLBEP00000030376	zf-met	PF12874.7	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000031784	-	960	-	ENSLBEP00000030376	319 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000022939's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000022939's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000022939	-	64	45.045	ENSLBEG00000025696	-	61	45.045
ENSLBEG00000022939	-	61	33.163	ENSLBEG00000011040	-	52	35.870
ENSLBEG00000022939	-	61	43.119	ENSLBEG00000014211	-	90	43.119
ENSLBEG00000022939	-	62	43.478	ENSLBEG00000007937	-	65	42.727
ENSLBEG00000022939	-	68	40.845	ENSLBEG00000011465	-	85	40.458
ENSLBEG00000022939	-	57	45.098	ENSLBEG00000011145	si:cabz01071911.3	80	45.098
ENSLBEG00000022939	-	71	44.860	ENSLBEG00000001920	-	89	41.525
ENSLBEG00000022939	-	61	41.912	ENSLBEG00000004805	-	79	42.105
ENSLBEG00000022939	-	61	41.912	ENSLBEG00000015694	-	77	44.706
ENSLBEG00000022939	-	56	38.318	ENSLBEG00000017424	-	89	38.318
ENSLBEG00000022939	-	62	39.706	ENSLBEG00000028243	-	81	45.098
ENSLBEG00000022939	-	52	51.282	ENSLBEG00000001756	-	92	44.954
ENSLBEG00000022939	-	72	42.105	ENSLBEG00000002357	-	87	51.282
ENSLBEG00000022939	-	64	42.667	ENSLBEG00000008606	-	97	38.938
ENSLBEG00000022939	-	79	53.247	ENSLBEG00000026457	-	89	43.396
ENSLBEG00000022939	-	64	50.847	ENSLBEG00000018970	-	78	50.847
ENSLBEG00000022939	-	52	43.571	ENSLBEG00000015264	-	68	43.571
ENSLBEG00000022939	-	68	37.500	ENSLBEG00000012201	-	57	39.007
ENSLBEG00000022939	-	58	33.333	ENSLBEG00000025305	-	84	33.333
ENSLBEG00000022939	-	58	39.640	ENSLBEG00000023388	-	63	39.640
ENSLBEG00000022939	-	63	35.616	ENSLBEG00000021260	-	77	36.923
ENSLBEG00000022939	-	60	38.889	ENSLBEG00000017726	-	83	38.889
ENSLBEG00000022939	-	54	51.351	ENSLBEG00000000343	-	68	51.282
ENSLBEG00000022939	-	61	42.222	ENSLBEG00000008689	-	86	42.222
ENSLBEG00000022939	-	54	38.686	ENSLBEG00000022736	prdm5	50	38.406
ENSLBEG00000022939	-	55	39.716	ENSLBEG00000011210	-	50	39.716
ENSLBEG00000022939	-	61	41.912	ENSLBEG00000011349	-	76	41.912
ENSLBEG00000022939	-	63	43.925	ENSLBEG00000007837	-	83	43.925
ENSLBEG00000022939	-	52	44.340	ENSLBEG00000020297	gfi1b	53	44.340
ENSLBEG00000022939	-	50	40.441	ENSLBEG00000011028	-	67	40.441
ENSLBEG00000022939	-	58	37.267	ENSLBEG00000006161	-	89	37.267
ENSLBEG00000022939	-	63	37.857	ENSLBEG00000014282	-	72	43.478
ENSLBEG00000022939	-	52	44.578	ENSLBEG00000012438	ZNF319	91	44.578
ENSLBEG00000022939	-	64	42.553	ENSLBEG00000000373	-	71	42.553
ENSLBEG00000022939	-	53	43.373	ENSLBEG00000010165	-	90	44.444
ENSLBEG00000022939	-	64	42.667	ENSLBEG00000008115	-	96	35.338
ENSLBEG00000022939	-	52	44.444	ENSLBEG00000009580	-	75	44.444
ENSLBEG00000022939	-	80	34.969	ENSLBEG00000013570	-	97	41.912
ENSLBEG00000022939	-	68	38.235	ENSLBEG00000010278	-	96	41.739
ENSLBEG00000022939	-	68	41.026	ENSLBEG00000024737	-	91	46.250

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000022939	-	52	35.676	ENSACIG00000007882	-	75	35.676	Amphilophus_citrinellus
ENSLBEG00000022939	-	61	41.353	ENSACIG00000000360	si:ch211-241b2.1	95	41.045	Amphilophus_citrinellus
ENSLBEG00000022939	-	60	39.706	ENSATEG00000008683	si:ch211-241b2.1	74	39.706	Anabas_testudineus
ENSLBEG00000022939	-	54	44.444	ENSAMXG00000043291	-	62	43.697	Astyanax_mexicanus
ENSLBEG00000022939	-	58	43.636	ENSDARG00000078814	si:dkey-34m19.3	84	43.636	Danio_rerio
ENSLBEG00000022939	-	67	40.000	ENSDARG00000116765	zgc:162962	97	40.000	Danio_rerio
ENSLBEG00000022939	-	63	35.071	ENSDARG00000098661	AL935300.3	58	43.382	Danio_rerio
ENSLBEG00000022939	-	50	40.964	ENSFHEG00000013152	-	68	38.235	Fundulus_heteroclitus
ENSLBEG00000022939	-	64	45.000	ENSHBUG00000018916	-	59	46.753	Haplochromis_burtoni
ENSLBEG00000022939	-	66	36.765	ENSHBUG00000009953	-	61	36.765	Haplochromis_burtoni
ENSLBEG00000022939	-	76	37.419	ENSKMAG00000009563	-	73	42.188	Kryptolebias_marmoratus
ENSLBEG00000022939	-	65	36.029	ENSMZEG00005027943	-	97	50.769	Maylandia_zebra
ENSLBEG00000022939	-	58	41.429	ENSMZEG00005027793	-	85	42.143	Maylandia_zebra
ENSLBEG00000022939	-	50	31.507	ENSMZEG00005025568	-	78	32.877	Maylandia_zebra
ENSLBEG00000022939	-	58	42.143	ENSMZEG00005026470	-	68	42.143	Maylandia_zebra
ENSLBEG00000022939	-	66	45.714	ENSMZEG00005007426	-	61	45.714	Maylandia_zebra
ENSLBEG00000022939	-	53	40.323	ENSMALG00000008638	-	61	40.323	Monopterus_albus
ENSLBEG00000022939	-	81	41.549	ENSMALG00000018074	-	67	42.453	Monopterus_albus
ENSLBEG00000022939	-	50	50.649	ENSPFOG00000011766	-	97	50.649	Poecilia_formosa
ENSLBEG00000022939	-	70	41.353	ENSPLAG00000016561	zgc:113348	89	46.875	Poecilia_latipinna
ENSLBEG00000022939	-	69	38.346	ENSPMEG00000007573	zgc:113343	59	48.718	Poecilia_mexicana
ENSLBEG00000022939	-	50	48.980	ENSPREG00000005538	-	73	48.980	Poecilia_reticulata
ENSLBEG00000022939	-	63	49.057	ENSSPAG00000013109	si:ch211-241b2.1	69	49.057	Stegastes_partitus
ENSLBEG00000022939	-	60	30.583	ENSSPAG00000009426	-	70	31.658	Stegastes_partitus
ENSLBEG00000022939	-	52	51.190	ENSTNIG00000000277	-	94	51.190	Tetraodon_nigroviridis
ENSLBEG00000022939	-	63	39.850	ENSXCOG00000017871	zgc:113343	63	48.718	Xiphophorus_couchianus
ENSLBEG00000022939	-	69	39.850	ENSXMAG00000019923	zgc:113343	61	48.718	Xiphophorus_maculatus