EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000022954 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 4796 bases
Position: chrFKLU01000520.1:220879-225674
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000030409	RRM_1	PF00076.22	6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000031817	-	417	-	ENSLBEP00000030409	138 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000022954's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000022954's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000022954	-	80	54.783	ENSLBEG00000024167	srsf11	88	66.279

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000022954	-	65	67.778	ENSG00000116754	SRSF11	64	73.171	Homo_sapiens
ENSLBEG00000022954	-	89	71.545	ENSG00000153914	SREK1	88	84.091	Homo_sapiens
ENSLBEG00000022954	-	62	68.235	ENSAPOG00000004488	-	79	68.235	Acanthochromis_polyacanthus
ENSLBEG00000022954	-	62	66.279	ENSAPOG00000007244	-	62	66.279	Acanthochromis_polyacanthus
ENSLBEG00000022954	-	63	65.517	ENSACIG00000012348	-	92	65.517	Amphilophus_citrinellus
ENSLBEG00000022954	-	93	89.147	ENSACIG00000015055	-	100	89.147	Amphilophus_citrinellus
ENSLBEG00000022954	-	67	64.211	ENSACIG00000018075	-	79	68.235	Amphilophus_citrinellus
ENSLBEG00000022954	-	58	71.250	ENSAOCG00000000739	-	85	71.250	Amphiprion_ocellaris
ENSLBEG00000022954	-	78	81.308	ENSAOCG00000024368	-	99	81.308	Amphiprion_ocellaris
ENSLBEG00000022954	-	66	92.308	ENSAPEG00000002218	-	99	92.308	Amphiprion_percula
ENSLBEG00000022954	-	80	54.783	ENSAPEG00000003142	SRSF11	85	68.293	Amphiprion_percula
ENSLBEG00000022954	-	62	68.235	ENSAPEG00000003619	SRSF11	79	68.235	Amphiprion_percula
ENSLBEG00000022954	-	60	68.675	ENSATEG00000011691	srsf11	76	68.293	Anabas_testudineus
ENSLBEG00000022954	-	67	64.211	ENSATEG00000007534	-	79	68.235	Anabas_testudineus
ENSLBEG00000022954	-	60	95.181	ENSATEG00000009464	-	91	95.181	Anabas_testudineus
ENSLBEG00000022954	-	100	67.391	ENSANAG00000031358	SREK1	88	84.091	Aotus_nancymaae
ENSLBEG00000022954	-	62	66.279	ENSACLG00000000623	srsf11	88	66.279	Astatotilapia_calliptera
ENSLBEG00000022954	-	80	70.435	ENSBTAG00000007321	SREK1	88	85.227	Bos_taurus
ENSLBEG00000022954	-	91	63.846	ENSCJAG00000015950	SREK1	88	84.091	Callithrix_jacchus
ENSLBEG00000022954	-	59	72.840	ENSCAFG00020017255	-	73	73.171	Canis_lupus_dingo
ENSLBEG00000022954	-	89	72.358	ENSCAFG00020019449	-	100	78.000	Canis_lupus_dingo
ENSLBEG00000022954	-	59	73.171	ENSCHIG00000025295	SRSF11	69	73.171	Capra_hircus
ENSLBEG00000022954	-	60	87.952	ENSCHIG00000025052	-	88	85.227	Capra_hircus
ENSLBEG00000022954	-	77	57.798	ENSTSYG00000033270	-	77	58.182	Carlito_syrichta
ENSLBEG00000022954	-	89	72.358	ENSTSYG00000036957	SREK1	88	85.227	Carlito_syrichta
ENSLBEG00000022954	-	100	67.391	ENSCCAG00000020591	SREK1	88	84.091	Cebus_capucinus
ENSLBEG00000022954	-	80	67.826	ENSCATG00000031482	SREK1	88	84.091	Cercocebus_atys
ENSLBEG00000022954	-	100	66.906	ENSCPBG00000026866	SREK1	100	66.906	Chrysemys_picta_bellii
ENSLBEG00000022954	-	90	52.419	ENSCPBG00000022430	-	77	66.667	Chrysemys_picta_bellii
ENSLBEG00000022954	-	80	67.826	ENSCANG00000030421	SREK1	88	84.091	Colobus_angolensis_palliatus
ENSLBEG00000022954	-	100	74.101	ENSCSEG00000013934	-	91	88.750	Cynoglossus_semilaevis
ENSLBEG00000022954	-	93	79.070	ENSCVAG00000002404	-	100	79.070	Cyprinodon_variegatus
ENSLBEG00000022954	-	60	66.265	ENSDARG00000098574	srsf11	91	66.265	Danio_rerio
ENSLBEG00000022954	-	89	73.171	ENSDORG00000023160	-	91	71.875	Dipodomys_ordii
ENSLBEG00000022954	-	59	73.171	ENSEASG00005007847	SRSF11	72	73.171	Equus_asinus_asinus
ENSLBEG00000022954	-	89	72.358	ENSEASG00005006832	-	77	85.227	Equus_asinus_asinus
ENSLBEG00000022954	-	89	72.358	ENSECAG00000035731	-	77	85.227	Equus_caballus
ENSLBEG00000022954	-	60	86.747	ENSFCAG00000036884	-	88	84.091	Felis_catus
ENSLBEG00000022954	-	65	67.778	ENSFCAG00000034448	-	65	73.171	Felis_catus
ENSLBEG00000022954	-	92	72.868	ENSFHEG00000020959	-	96	72.868	Fundulus_heteroclitus
ENSLBEG00000022954	-	78	72.973	ENSGALG00000043541	SREK1	100	78.788	Gallus_gallus
ENSLBEG00000022954	-	92	81.890	ENSGAFG00000001732	-	98	81.890	Gambusia_affinis
ENSLBEG00000022954	-	100	66.906	ENSGAGG00000006087	SREK1	100	66.906	Gopherus_agassizii
ENSLBEG00000022954	-	66	69.231	ENSGAGG00000022411	-	88	69.231	Gopherus_agassizii
ENSLBEG00000022954	-	89	71.545	ENSGGOG00000004737	SREK1	88	84.091	Gorilla_gorilla
ENSLBEG00000022954	-	98	75.735	ENSHBUG00000007082	-	97	75.735	Haplochromis_burtoni
ENSLBEG00000022954	-	60	90.361	ENSHCOG00000017228	-	81	90.805	Hippocampus_comes
ENSLBEG00000022954	-	62	66.279	ENSHCOG00000016860	-	88	66.279	Hippocampus_comes
ENSLBEG00000022954	-	80	68.696	ENSSTOG00000008850	SREK1	88	85.227	Ictidomys_tridecemlineatus
ENSLBEG00000022954	-	89	72.358	ENSJJAG00000008846	-	93	71.094	Jaculus_jaculus
ENSLBEG00000022954	-	89	71.545	ENSMFAG00000039823	SREK1	88	84.091	Macaca_fascicularis
ENSLBEG00000022954	-	80	67.826	ENSMMUG00000014586	SREK1	80	85.057	Macaca_mulatta
ENSLBEG00000022954	-	80	67.826	ENSMNEG00000030723	SREK1	88	84.091	Macaca_nemestrina
ENSLBEG00000022954	-	80	67.826	ENSMLEG00000039078	SREK1	88	84.091	Mandrillus_leucophaeus
ENSLBEG00000022954	-	63	96.552	ENSMAMG00000003099	-	84	96.552	Mastacembelus_armatus
ENSLBEG00000022954	-	80	58.261	ENSMAMG00000015002	-	79	68.235	Mastacembelus_armatus
ENSLBEG00000022954	-	86	77.966	ENSMZEG00005005707	-	88	77.966	Maylandia_zebra
ENSLBEG00000022954	-	80	68.696	ENSMICG00000034959	SREK1	88	85.227	Microcebus_murinus
ENSLBEG00000022954	-	63	68.966	ENSMMOG00000016751	-	81	68.966	Mola_mola
ENSLBEG00000022954	-	69	62.105	ENSMMOG00000008877	-	90	62.105	Mola_mola
ENSLBEG00000022954	-	59	69.512	ENSMALG00000016608	srsf11	84	69.512	Monopterus_albus
ENSLBEG00000022954	-	62	94.186	ENSMALG00000017086	srek1	98	93.103	Monopterus_albus
ENSLBEG00000022954	-	59	73.171	MGP_CAROLIEiJ_G0025767	Srsf11	82	73.171	Mus_caroli
ENSLBEG00000022954	-	59	73.171	ENSMUSG00000055436	Srsf11	81	73.171	Mus_musculus
ENSLBEG00000022954	-	59	73.171	MGP_PahariEiJ_G0027217	Srsf11	82	73.171	Mus_pahari
ENSLBEG00000022954	-	59	73.171	MGP_SPRETEiJ_G0026719	Srsf11	82	73.171	Mus_spretus
ENSLBEG00000022954	-	89	73.171	ENSNGAG00000014631	-	91	71.875	Nannospalax_galili
ENSLBEG00000022954	-	63	65.517	ENSNBRG00000020213	-	92	65.517	Neolamprologus_brichardi
ENSLBEG00000022954	-	98	76.471	ENSNBRG00000010656	-	97	76.471	Neolamprologus_brichardi
ENSLBEG00000022954	-	80	67.826	ENSNLEG00000003827	SREK1	88	84.091	Nomascus_leucogenys
ENSLBEG00000022954	-	89	71.545	ENSODEG00000016218	-	88	82.418	Octodon_degus
ENSLBEG00000022954	-	57	91.026	ENSORLG00000002711	-	65	91.026	Oryzias_latipes
ENSLBEG00000022954	-	59	70.370	ENSORLG00000030366	-	72	70.370	Oryzias_latipes
ENSLBEG00000022954	-	67	64.211	ENSORLG00020009393	-	72	70.370	Oryzias_latipes_hni
ENSLBEG00000022954	-	89	78.049	ENSORLG00020012815	-	90	78.740	Oryzias_latipes_hni
ENSLBEG00000022954	-	92	78.740	ENSORLG00015020455	-	94	78.740	Oryzias_latipes_hsok
ENSLBEG00000022954	-	67	64.211	ENSORLG00015009374	-	72	70.370	Oryzias_latipes_hsok
ENSLBEG00000022954	-	89	71.545	ENSPPAG00000031605	SREK1	80	85.057	Pan_paniscus
ENSLBEG00000022954	-	80	67.826	ENSPPRG00000024617	SREK1	88	84.091	Panthera_pardus
ENSLBEG00000022954	-	80	67.826	ENSPTIG00000006608	SREK1	88	84.091	Panthera_tigris_altaica
ENSLBEG00000022954	-	89	71.545	ENSPTRG00000016936	SREK1	88	84.091	Pan_troglodytes
ENSLBEG00000022954	-	89	71.545	ENSPANG00000008953	SREK1	88	84.091	Papio_anubis
ENSLBEG00000022954	-	62	64.706	ENSPKIG00000021576	-	89	64.706	Paramormyrops_kingsleyae
ENSLBEG00000022954	-	63	88.506	ENSPMGG00000017029	-	76	88.506	Periophthalmus_magnuspinnatus
ENSLBEG00000022954	-	60	68.675	ENSPMGG00000000954	-	78	68.675	Periophthalmus_magnuspinnatus
ENSLBEG00000022954	-	60	67.470	ENSPMGG00000005045	-	73	67.470	Periophthalmus_magnuspinnatus
ENSLBEG00000022954	-	97	77.612	ENSPLAG00000014609	-	93	77.612	Poecilia_latipinna
ENSLBEG00000022954	-	97	77.612	ENSPLAG00000008818	-	93	77.612	Poecilia_latipinna
ENSLBEG00000022954	-	73	60.194	ENSPLAG00000009484	-	71	60.194	Poecilia_latipinna
ENSLBEG00000022954	-	73	60.194	ENSPMEG00000023453	-	71	60.194	Poecilia_mexicana
ENSLBEG00000022954	-	59	68.293	ENSPMEG00000018837	srsf11	67	68.293	Poecilia_mexicana
ENSLBEG00000022954	-	97	77.612	ENSPMEG00000006824	-	93	77.612	Poecilia_mexicana
ENSLBEG00000022954	-	97	77.612	ENSPMEG00000006607	-	93	77.612	Poecilia_mexicana
ENSLBEG00000022954	-	92	85.827	ENSPREG00000019922	-	98	85.827	Poecilia_reticulata
ENSLBEG00000022954	-	89	72.358	ENSPCOG00000026230	SREK1	88	85.227	Propithecus_coquereli
ENSLBEG00000022954	-	98	75.735	ENSPNYG00000007178	-	97	75.735	Pundamilia_nyererei
ENSLBEG00000022954	-	89	71.545	ENSRBIG00000033818	SREK1	88	84.091	Rhinopithecus_bieti
ENSLBEG00000022954	-	59	73.171	ENSRBIG00000042971	SRSF11	63	73.171	Rhinopithecus_bieti
ENSLBEG00000022954	-	80	67.826	ENSRROG00000017210	SREK1	88	84.091	Rhinopithecus_roxellana
ENSLBEG00000022954	-	100	67.391	ENSSBOG00000031230	SREK1	88	84.091	Saimiri_boliviensis_boliviensis
ENSLBEG00000022954	-	59	73.171	ENSSBOG00000033461	SRSF11	63	73.171	Saimiri_boliviensis_boliviensis
ENSLBEG00000022954	-	58	70.000	ENSSFOG00015016086	-	73	70.000	Scleropages_formosus
ENSLBEG00000022954	-	67	92.473	ENSSDUG00000010395	-	92	92.473	Seriola_dumerili
ENSLBEG00000022954	-	62	66.279	ENSSLDG00000015477	-	88	66.279	Seriola_lalandi_dorsalis
ENSLBEG00000022954	-	67	64.211	ENSSLDG00000012105	-	79	68.235	Seriola_lalandi_dorsalis
ENSLBEG00000022954	-	67	92.473	ENSSLDG00000016285	-	92	92.473	Seriola_lalandi_dorsalis
ENSLBEG00000022954	-	73	85.149	ENSSPAG00000022310	-	93	85.149	Stegastes_partitus
ENSLBEG00000022954	-	64	66.292	ENSSPAG00000016483	-	71	66.292	Stegastes_partitus
ENSLBEG00000022954	-	93	86.822	ENSTRUG00000022058	-	100	86.822	Takifugu_rubripes
ENSLBEG00000022954	-	59	72.840	ENSUAMG00000008403	-	65	71.765	Ursus_americanus
ENSLBEG00000022954	-	59	89.024	ENSUAMG00000022662	-	91	78.788	Ursus_americanus
ENSLBEG00000022954	-	89	72.358	ENSVVUG00000005888	-	100	78.000	Vulpes_vulpes
ENSLBEG00000022954	-	59	70.732	ENSXCOG00000015127	-	88	70.732	Xiphophorus_couchianus
ENSLBEG00000022954	-	62	67.442	ENSXCOG00000003220	-	74	67.442	Xiphophorus_couchianus
ENSLBEG00000022954	-	100	77.536	ENSXCOG00000017792	-	100	77.536	Xiphophorus_couchianus
ENSLBEG00000022954	-	73	60.194	ENSXMAG00000019180	SRSF11	68	60.194	Xiphophorus_maculatus
ENSLBEG00000022954	-	92	81.890	ENSXMAG00000028210	-	98	81.890	Xiphophorus_maculatus