EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000022980 (Gene tree)
Gene ID: -
Gene Symbol: srek1
Alias: zgc:100974
Full Name: splicing regulatory glutamine/lysine-rich protein 1
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 1821 bases
Position: chrFKLU01000520.1:226069-227889
Accession: ZDB-GENE-040801-132
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000030434	RRM_1	PF00076.22	1.4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000031843	-	570	-	ENSLBEP00000030434	189 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000022980's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000022980's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000022980	srek1	56	32.727	ENSLBEG00000020441	ncbp2	66	32.727

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000022980	srek1	92	75.956	ENSG00000153914	SREK1	93	73.214	Homo_sapiens
ENSLBEG00000022980	srek1	92	83.243	ENSACIG00000015041	srek1	98	83.243	Amphilophus_citrinellus
ENSLBEG00000022980	srek1	92	75.956	ENSANAG00000031358	SREK1	97	74.737	Aotus_nancymaae
ENSLBEG00000022980	srek1	90	88.764	ENSACLG00000026754	srek1	61	88.764	Astatotilapia_calliptera
ENSLBEG00000022980	srek1	92	75.956	ENSCJAG00000015950	SREK1	97	74.737	Callithrix_jacchus
ENSLBEG00000022980	srek1	80	79.245	ENSCAFG00020019448	-	80	79.245	Canis_lupus_dingo
ENSLBEG00000022980	srek1	92	76.503	ENSTSYG00000036957	SREK1	97	74.093	Carlito_syrichta
ENSLBEG00000022980	srek1	92	75.956	ENSCATG00000031482	SREK1	97	74.737	Cercocebus_atys
ENSLBEG00000022980	srek1	76	82.877	ENSCPBG00000026866	SREK1	53	76.836	Chrysemys_picta_bellii
ENSLBEG00000022980	srek1	92	75.956	ENSCANG00000030421	SREK1	97	74.737	Colobus_angolensis_palliatus
ENSLBEG00000022980	srek1	95	85.165	ENSCVAG00000002411	srek1	91	85.165	Cyprinodon_variegatus
ENSLBEG00000022980	srek1	93	74.737	ENSDORG00000023425	-	97	74.737	Dipodomys_ordii
ENSLBEG00000022980	srek1	93	73.575	ENSEASG00005006829	-	97	73.575	Equus_asinus_asinus
ENSLBEG00000022980	srek1	93	73.575	ENSECAG00000036994	-	97	73.575	Equus_caballus
ENSLBEG00000022980	srek1	53	81.553	ENSGALG00000043541	SREK1	53	73.881	Gallus_gallus
ENSLBEG00000022980	srek1	92	75.956	ENSGGOG00000004737	SREK1	97	74.737	Gorilla_gorilla
ENSLBEG00000022980	srek1	90	88.764	ENSHBUG00000007057	srek1	97	88.764	Haplochromis_burtoni
ENSLBEG00000022980	srek1	96	78.610	ENSHCOG00000017240	SREK1	57	78.610	Hippocampus_comes
ENSLBEG00000022980	srek1	93	74.737	ENSJJAG00000000214	-	97	74.737	Jaculus_jaculus
ENSLBEG00000022980	srek1	92	75.956	ENSMFAG00000039823	SREK1	97	74.737	Macaca_fascicularis
ENSLBEG00000022980	srek1	92	75.956	ENSMNEG00000030723	SREK1	97	74.737	Macaca_nemestrina
ENSLBEG00000022980	srek1	92	75.956	ENSMLEG00000039078	SREK1	97	74.737	Mandrillus_leucophaeus
ENSLBEG00000022980	srek1	90	88.764	ENSMZEG00005005719	srek1	97	88.764	Maylandia_zebra
ENSLBEG00000022980	srek1	67	76.562	ENSMGAG00000002047	SREK1	68	68.208	Meleagris_gallopavo
ENSLBEG00000022980	srek1	92	73.656	ENSMAUG00000010066	-	58	74.194	Mesocricetus_auratus
ENSLBEG00000022980	srek1	92	75.956	ENSMICG00000034959	SREK1	97	74.737	Microcebus_murinus
ENSLBEG00000022980	srek1	92	73.656	ENSMOCG00000001536	-	58	74.194	Microtus_ochrogaster
ENSLBEG00000022980	srek1	92	86.782	ENSMMOG00000008409	srek1	93	86.782	Mola_mola
ENSLBEG00000022980	srek1	93	72.539	ENSNGAG00000017527	-	97	73.057	Nannospalax_galili
ENSLBEG00000022980	srek1	90	88.333	ENSNBRG00000010718	srek1	97	88.333	Neolamprologus_brichardi
ENSLBEG00000022980	srek1	90	90.286	ENSONIG00000011080	srek1	53	85.484	Oreochromis_niloticus
ENSLBEG00000022980	srek1	96	80.829	ENSORLG00015020471	srek1	99	80.829	Oryzias_latipes_hsok
ENSLBEG00000022980	srek1	93	74.737	ENSPPAG00000031605	SREK1	97	74.737	Pan_paniscus
ENSLBEG00000022980	srek1	92	75.956	ENSPTRG00000016936	SREK1	97	74.737	Pan_troglodytes
ENSLBEG00000022980	srek1	92	75.956	ENSPANG00000008953	SREK1	97	74.737	Papio_anubis
ENSLBEG00000022980	srek1	90	85.294	ENSPMGG00000017031	srek1	98	85.294	Periophthalmus_magnuspinnatus
ENSLBEG00000022980	srek1	92	73.656	ENSPEMG00000024051	-	60	74.194	Peromyscus_maniculatus_bairdii
ENSLBEG00000022980	srek1	93	75.263	ENSPCIG00000017750	-	97	75.263	Phascolarctos_cinereus
ENSLBEG00000022980	srek1	90	87.356	ENSPLAG00000008827	srek1	99	87.356	Poecilia_latipinna
ENSLBEG00000022980	srek1	87	86.905	ENSPREG00000019912	srek1	98	86.905	Poecilia_reticulata
ENSLBEG00000022980	srek1	92	75.956	ENSPCOG00000026230	SREK1	97	74.737	Propithecus_coquereli
ENSLBEG00000022980	srek1	92	75.956	ENSRBIG00000033818	SREK1	98	72.821	Rhinopithecus_bieti
ENSLBEG00000022980	srek1	92	75.956	ENSRROG00000017210	SREK1	97	74.737	Rhinopithecus_roxellana
ENSLBEG00000022980	srek1	92	75.956	ENSSBOG00000031230	SREK1	97	74.737	Saimiri_boliviensis_boliviensis
ENSLBEG00000022980	srek1	93	74.737	ENSSPUG00000016553	SREK1	61	74.737	Sphenodon_punctatus
ENSLBEG00000022980	srek1	91	89.205	ENSSPAG00000022298	srek1	99	89.205	Stegastes_partitus
ENSLBEG00000022980	srek1	94	83.051	ENSTRUG00000002960	srek1	100	83.051	Takifugu_rubripes
ENSLBEG00000022980	srek1	93	74.737	ENSUAMG00000022661	-	97	74.737	Ursus_americanus
ENSLBEG00000022980	srek1	80	79.245	ENSVVUG00000005890	-	80	79.245	Vulpes_vulpes
ENSLBEG00000022980	srek1	90	86.441	ENSXCOG00000017793	srek1	97	86.441	Xiphophorus_couchianus