EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000023074 (Gene tree)
Gene ID: -
Gene Symbol: zgc:110045
Alias: -
Full Name: poly(rC)-binding protein 3-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 9042 bases
Position: chrFKLU01000252.1:406153-415194
Accession: 109993248
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000030622	KH_1	PF00013.29	4.9e-54	1	3
ENSLBEP00000030622	KH_1	PF00013.29	4.9e-54	2	3
ENSLBEP00000030622	KH_1	PF00013.29	4.9e-54	3	3
ENSLBEP00000030591	KH_1	PF00013.29	2.7e-52	1	3
ENSLBEP00000030591	KH_1	PF00013.29	2.7e-52	2	3
ENSLBEP00000030591	KH_1	PF00013.29	2.7e-52	3	3
ENSLBEP00000030622	KH_2	PF07650.17	2.3e-14	1	1
ENSLBEP00000030591	KH_2	PF07650.17	3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000032034	-	1008	XM_020646146	ENSLBEP00000030622	335 (aa)	XP_020501802	-
ENSLBET00000032003	-	918	-	ENSLBEP00000030591	305 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000023074's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000023074's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000023074	zgc:110045	98	60.896	ENSLBEG00000006542	-	98	60.896
ENSLBEG00000023074	zgc:110045	90	33.654	ENSLBEG00000017826	FUBP3	67	32.787
ENSLBEG00000023074	zgc:110045	96	31.579	ENSLBEG00000007845	-	74	31.579
ENSLBEG00000023074	zgc:110045	96	68.155	ENSLBEG00000015211	PCBP2	97	68.155
ENSLBEG00000023074	zgc:110045	87	38.144	ENSLBEG00000003511	NOVA1	57	37.374
ENSLBEG00000023074	zgc:110045	96	67.802	ENSLBEG00000010080	pcbp2	97	67.802
ENSLBEG00000023074	zgc:110045	88	40.984	ENSLBEG00000012700	fubp1	60	40.984
ENSLBEG00000023074	zgc:110045	92	40.580	ENSLBEG00000028542	nova1	63	40.580
ENSLBEG00000023074	zgc:110045	97	65.758	ENSLBEG00000006201	pcbp3	96	65.758
ENSLBEG00000023074	zgc:110045	96	31.461	ENSLBEG00000005339	igf2bp3	68	32.143
ENSLBEG00000023074	zgc:110045	74	45.312	ENSLBEG00000001550	hnrnpk	89	30.814
ENSLBEG00000023074	zgc:110045	96	30.539	ENSLBEG00000022004	igf2bp1	62	30.539
ENSLBEG00000023074	zgc:110045	92	41.270	ENSLBEG00000005191	khsrp	62	42.373
ENSLBEG00000023074	zgc:110045	76	44.286	ENSLBEG00000019787	hnrpkl	58	44.286
ENSLBEG00000023074	zgc:110045	98	57.224	ENSLBEG00000011345	-	80	53.943
ENSLBEG00000023074	zgc:110045	92	33.813	ENSLBEG00000003710	IGF2BP2	92	32.353

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000023074	zgc:110045	99	70.623	ENSG00000183570	PCBP3	99	67.403	Homo_sapiens
ENSLBEG00000023074	zgc:110045	100	88.630	ENSAPOG00000023735	zgc:110045	100	88.630	Acanthochromis_polyacanthus
ENSLBEG00000023074	zgc:110045	100	88.728	ENSACIG00000002577	zgc:110045	100	88.728	Amphilophus_citrinellus
ENSLBEG00000023074	zgc:110045	64	89.202	ENSAOCG00000005266	zgc:110045	99	89.202	Amphiprion_ocellaris
ENSLBEG00000023074	zgc:110045	97	87.688	ENSAPEG00000000729	zgc:110045	73	87.688	Amphiprion_percula
ENSLBEG00000023074	zgc:110045	94	84.746	ENSATEG00000011191	zgc:110045	65	84.746	Anabas_testudineus
ENSLBEG00000023074	zgc:110045	97	88.288	ENSACLG00000019285	zgc:110045	73	88.288	Astatotilapia_calliptera
ENSLBEG00000023074	zgc:110045	90	83.333	ENSBTAG00000030775	PCBP3	99	67.403	Bos_taurus
ENSLBEG00000023074	zgc:110045	99	71.848	ENSCAFG00000011907	PCBP3	91	71.848	Canis_familiaris
ENSLBEG00000023074	zgc:110045	99	67.930	ENSCHIG00000015841	PCBP3	90	67.930	Capra_hircus
ENSLBEG00000023074	zgc:110045	66	68.584	ENSTSYG00000005254	PCBP3	85	68.584	Carlito_syrichta
ENSLBEG00000023074	zgc:110045	99	53.550	ENSCAPG00000006767	PCBP3	83	53.550	Cavia_aperea
ENSLBEG00000023074	zgc:110045	99	70.262	ENSCPOG00000003648	PCBP3	91	70.262	Cavia_porcellus
ENSLBEG00000023074	zgc:110045	99	70.326	ENSCCAG00000024561	PCBP3	95	80.357	Cebus_capucinus
ENSLBEG00000023074	zgc:110045	99	70.623	ENSCATG00000038419	PCBP3	99	67.422	Cercocebus_atys
ENSLBEG00000023074	zgc:110045	99	70.262	ENSCLAG00000006667	PCBP3	91	70.262	Chinchilla_lanigera
ENSLBEG00000023074	zgc:110045	99	70.623	ENSCANG00000026757	PCBP3	99	65.746	Colobus_angolensis_palliatus
ENSLBEG00000023074	zgc:110045	99	70.262	ENSCGRG00001006836	Pcbp3	91	70.262	Cricetulus_griseus_chok1gshd
ENSLBEG00000023074	zgc:110045	99	70.262	ENSCGRG00000001837	Pcbp3	91	70.262	Cricetulus_griseus_crigri
ENSLBEG00000023074	zgc:110045	100	86.589	ENSCSEG00000010020	zgc:110045	100	86.589	Cynoglossus_semilaevis
ENSLBEG00000023074	zgc:110045	87	87.692	ENSCVAG00000004726	zgc:110045	99	86.758	Cyprinodon_variegatus
ENSLBEG00000023074	zgc:110045	84	82.778	ENSDARG00000057141	zgc:110045	89	80.597	Danio_rerio
ENSLBEG00000023074	zgc:110045	99	70.262	ENSDNOG00000049518	PCBP3	92	70.262	Dasypus_novemcinctus
ENSLBEG00000023074	zgc:110045	66	69.027	ENSDORG00000003640	Pcbp3	87	69.027	Dipodomys_ordii
ENSLBEG00000023074	zgc:110045	83	80.982	ENSEBUG00000009697	zgc:110045	99	67.464	Eptatretus_burgeri
ENSLBEG00000023074	zgc:110045	99	70.623	ENSEASG00005007068	PCBP3	91	70.623	Equus_asinus_asinus
ENSLBEG00000023074	zgc:110045	99	70.623	ENSECAG00000012413	PCBP3	91	70.623	Equus_caballus
ENSLBEG00000023074	zgc:110045	97	82.738	ENSELUG00000019784	zgc:110045	73	82.738	Esox_lucius
ENSLBEG00000023074	zgc:110045	99	70.326	ENSFCAG00000014812	PCBP3	91	70.326	Felis_catus
ENSLBEG00000023074	zgc:110045	99	70.326	ENSFDAG00000009117	PCBP3	91	70.326	Fukomys_damarensis
ENSLBEG00000023074	zgc:110045	97	79.083	ENSFHEG00000018838	-	97	90.094	Fundulus_heteroclitus
ENSLBEG00000023074	zgc:110045	96	83.234	ENSGMOG00000005953	zgc:110045	96	83.234	Gadus_morhua
ENSLBEG00000023074	zgc:110045	84	96.133	ENSGAFG00000017864	zgc:110045	100	85.470	Gambusia_affinis
ENSLBEG00000023074	zgc:110045	99	86.804	ENSGACG00000003044	zgc:110045	100	86.804	Gasterosteus_aculeatus
ENSLBEG00000023074	zgc:110045	99	70.623	ENSGGOG00000003683	PCBP3	91	70.623	Gorilla_gorilla
ENSLBEG00000023074	zgc:110045	100	88.630	ENSHBUG00000012495	zgc:110045	100	88.630	Haplochromis_burtoni
ENSLBEG00000023074	zgc:110045	99	70.262	ENSHGLG00000018620	PCBP3	91	70.262	Heterocephalus_glaber_female
ENSLBEG00000023074	zgc:110045	99	70.262	ENSHGLG00100013590	PCBP3	91	70.262	Heterocephalus_glaber_male
ENSLBEG00000023074	zgc:110045	100	78.592	ENSHCOG00000000818	zgc:110045	97	86.429	Hippocampus_comes
ENSLBEG00000023074	zgc:110045	84	80.663	ENSIPUG00000003932	zgc:110045	74	78.818	Ictalurus_punctatus
ENSLBEG00000023074	zgc:110045	99	70.262	ENSSTOG00000007178	PCBP3	91	70.262	Ictidomys_tridecemlineatus
ENSLBEG00000023074	zgc:110045	99	70.554	ENSJJAG00000021192	Pcbp3	91	70.554	Jaculus_jaculus
ENSLBEG00000023074	zgc:110045	87	89.744	ENSKMAG00000016179	-	97	93.970	Kryptolebias_marmoratus
ENSLBEG00000023074	zgc:110045	99	68.805	ENSLAFG00000020835	PCBP3	99	68.805	Loxodonta_africana
ENSLBEG00000023074	zgc:110045	99	70.623	ENSMFAG00000034574	PCBP3	99	67.422	Macaca_fascicularis
ENSLBEG00000023074	zgc:110045	99	70.623	ENSMMUG00000003825	PCBP3	99	65.680	Macaca_mulatta
ENSLBEG00000023074	zgc:110045	99	70.623	ENSMNEG00000035551	PCBP3	99	70.623	Macaca_nemestrina
ENSLBEG00000023074	zgc:110045	99	70.623	ENSMLEG00000038785	PCBP3	99	67.422	Mandrillus_leucophaeus
ENSLBEG00000023074	zgc:110045	97	87.048	ENSMAMG00000014389	zgc:110045	100	87.048	Mastacembelus_armatus
ENSLBEG00000023074	zgc:110045	97	88.288	ENSMZEG00005011785	zgc:110045	73	88.288	Maylandia_zebra
ENSLBEG00000023074	zgc:110045	99	69.971	ENSMAUG00000007036	Pcbp3	91	69.971	Mesocricetus_auratus
ENSLBEG00000023074	zgc:110045	99	70.326	ENSMICG00000012679	PCBP3	91	70.326	Microcebus_murinus
ENSLBEG00000023074	zgc:110045	99	70.262	ENSMOCG00000016127	Pcbp3	91	70.262	Microtus_ochrogaster
ENSLBEG00000023074	zgc:110045	57	93.714	ENSMMOG00000008399	zgc:110045	96	89.216	Mola_mola
ENSLBEG00000023074	zgc:110045	60	88.000	ENSMALG00000008763	zgc:110045	96	88.000	Monopterus_albus
ENSLBEG00000023074	zgc:110045	99	70.468	MGP_CAROLIEiJ_G0015475	Pcbp3	99	70.044	Mus_caroli
ENSLBEG00000023074	zgc:110045	99	70.468	ENSMUSG00000001120	Pcbp3	99	70.044	Mus_musculus
ENSLBEG00000023074	zgc:110045	99	70.468	MGP_PahariEiJ_G0030889	Pcbp3	99	70.044	Mus_pahari
ENSLBEG00000023074	zgc:110045	99	70.468	MGP_SPRETEiJ_G0016288	Pcbp3	99	70.044	Mus_spretus
ENSLBEG00000023074	zgc:110045	99	68.661	ENSMLUG00000003074	PCBP3	91	68.661	Myotis_lucifugus
ENSLBEG00000023074	zgc:110045	99	70.262	ENSNGAG00000005416	Pcbp3	91	70.262	Nannospalax_galili
ENSLBEG00000023074	zgc:110045	97	88.288	ENSNBRG00000017646	zgc:110045	73	88.288	Neolamprologus_brichardi
ENSLBEG00000023074	zgc:110045	99	70.623	ENSNLEG00000002639	PCBP3	91	70.623	Nomascus_leucogenys
ENSLBEG00000023074	zgc:110045	90	83.333	ENSMEUG00000012960	PCBP3	96	83.333	Notamacropus_eugenii
ENSLBEG00000023074	zgc:110045	99	67.930	ENSODEG00000012873	PCBP3	91	67.930	Octodon_degus
ENSLBEG00000023074	zgc:110045	97	88.288	ENSONIG00000010370	zgc:110045	77	88.288	Oreochromis_niloticus
ENSLBEG00000023074	zgc:110045	83	83.333	ENSOANG00000006265	PCBP3	90	68.750	Ornithorhynchus_anatinus
ENSLBEG00000023074	zgc:110045	97	87.087	ENSORLG00000014385	-	73	87.087	Oryzias_latipes
ENSLBEG00000023074	zgc:110045	97	86.486	ENSORLG00020003139	zgc:110045	82	91.089	Oryzias_latipes_hni
ENSLBEG00000023074	zgc:110045	97	86.787	ENSOMEG00000015459	-	73	86.787	Oryzias_melastigma
ENSLBEG00000023074	zgc:110045	99	68.732	ENSOARG00000012704	PCBP3	91	68.732	Ovis_aries
ENSLBEG00000023074	zgc:110045	99	70.623	ENSPPAG00000021940	PCBP3	91	70.623	Pan_paniscus
ENSLBEG00000023074	zgc:110045	99	70.326	ENSPPRG00000003933	PCBP3	91	70.326	Panthera_pardus
ENSLBEG00000023074	zgc:110045	99	57.353	ENSPTIG00000012038	PCBP3	90	57.864	Panthera_tigris_altaica
ENSLBEG00000023074	zgc:110045	99	52.410	ENSPTRG00000014010	PCBP3	99	50.970	Pan_troglodytes
ENSLBEG00000023074	zgc:110045	99	70.623	ENSPANG00000023631	PCBP3	99	67.422	Papio_anubis
ENSLBEG00000023074	zgc:110045	56	60.847	ENSPMGG00000022531	-	85	60.847	Periophthalmus_magnuspinnatus
ENSLBEG00000023074	zgc:110045	97	76.331	ENSPMGG00000021588	-	73	76.331	Periophthalmus_magnuspinnatus
ENSLBEG00000023074	zgc:110045	99	70.262	ENSPEMG00000000587	Pcbp3	91	70.262	Peromyscus_maniculatus_bairdii
ENSLBEG00000023074	zgc:110045	74	70.093	ENSPMAG00000004719	zgc:110045	93	71.429	Petromyzon_marinus
ENSLBEG00000023074	zgc:110045	98	86.567	ENSPFOG00000002348	zgc:110045	98	86.567	Poecilia_formosa
ENSLBEG00000023074	zgc:110045	56	97.059	ENSPLAG00000017488	zgc:110045	100	82.051	Poecilia_latipinna
ENSLBEG00000023074	zgc:110045	97	88.957	ENSPMEG00000012762	zgc:110045	100	85.470	Poecilia_mexicana
ENSLBEG00000023074	zgc:110045	97	87.688	ENSPREG00000001797	zgc:110045	89	96.040	Poecilia_reticulata
ENSLBEG00000023074	zgc:110045	77	67.433	ENSPPYG00000011525	-	94	67.433	Pongo_abelii
ENSLBEG00000023074	zgc:110045	86	64.286	ENSPCAG00000001454	PCBP3	95	64.286	Procavia_capensis
ENSLBEG00000023074	zgc:110045	99	70.326	ENSPCOG00000013797	PCBP3	99	62.963	Propithecus_coquereli
ENSLBEG00000023074	zgc:110045	90	82.738	ENSPVAG00000000832	PCBP3	70	81.622	Pteropus_vampyrus
ENSLBEG00000023074	zgc:110045	56	95.882	ENSPNYG00000004637	zgc:110045	91	91.089	Pundamilia_nyererei
ENSLBEG00000023074	zgc:110045	86	82.873	ENSPNAG00000004501	zgc:110045	89	81.188	Pygocentrus_nattereri
ENSLBEG00000023074	zgc:110045	99	70.623	ENSRROG00000034567	PCBP3	99	63.243	Rhinopithecus_roxellana
ENSLBEG00000023074	zgc:110045	99	70.623	ENSSBOG00000005789	PCBP3	91	70.623	Saimiri_boliviensis_boliviensis
ENSLBEG00000023074	zgc:110045	97	87.988	ENSSMAG00000013541	zgc:110045	93	89.286	Scophthalmus_maximus
ENSLBEG00000023074	zgc:110045	93	86.066	ENSSDUG00000019371	zgc:110045	66	86.066	Seriola_dumerili
ENSLBEG00000023074	zgc:110045	97	88.889	ENSSLDG00000021064	zgc:110045	73	88.889	Seriola_lalandi_dorsalis
ENSLBEG00000023074	zgc:110045	59	63.366	ENSSARG00000007629	-	100	63.366	Sorex_araneus
ENSLBEG00000023074	zgc:110045	100	88.921	ENSSPAG00000000563	zgc:110045	100	88.921	Stegastes_partitus
ENSLBEG00000023074	zgc:110045	99	70.326	ENSSSCG00000023041	PCBP3	91	70.326	Sus_scrofa
ENSLBEG00000023074	zgc:110045	86	86.364	ENSTRUG00000017789	zgc:110045	98	92.500	Takifugu_rubripes
ENSLBEG00000023074	zgc:110045	60	89.011	ENSTNIG00000003546	zgc:110045	99	84.080	Tetraodon_nigroviridis
ENSLBEG00000023074	zgc:110045	68	55.745	ENSTBEG00000011882	-	73	55.745	Tupaia_belangeri
ENSLBEG00000023074	zgc:110045	99	67.930	ENSUAMG00000006491	PCBP3	100	69.333	Ursus_americanus
ENSLBEG00000023074	zgc:110045	99	65.407	ENSUMAG00000025403	PCBP3	91	65.407	Ursus_maritimus
ENSLBEG00000023074	zgc:110045	99	65.579	ENSVVUG00000023862	PCBP3	99	64.348	Vulpes_vulpes
ENSLBEG00000023074	zgc:110045	80	99.281	ENSXCOG00000005968	zgc:110045	87	92.398	Xiphophorus_couchianus
ENSLBEG00000023074	zgc:110045	97	87.087	ENSXMAG00000008030	zgc:110045	73	87.087	Xiphophorus_maculatus