EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000023118 (Gene tree)
Gene ID: 109993875
Gene Symbol: alyref
Alias: tho4|thoc4|zgc:171753
Full Name: THO complex subunit 4-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 3997 bases
Position: chrFKLU01000269.1:738443-742439
Accession: 109993875
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000030634	RRM_1	PF00076.22	6.9e-14	1	1
ENSLBEP00000030616	RRM_1	PF00076.22	8.5e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000032048	-	834	-	ENSLBEP00000030634	277 (aa)	-	-
ENSLBET00000032028	-	2414	XM_020646989	ENSLBEP00000030616	304 (aa)	XP_020502645	-

Gene Model

Click here to download ENSLBEG00000023118's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000023118's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000023118	alyref	90	50.186	ENSLBEG00000005387	-	100	51.673
ENSLBEG00000023118	alyref	88	50.593	ENSLBEG00000012930	-	99	50.593

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000023118	alyref	88	58.300	ENSAPOG00000000183	-	98	57.895	Acanthochromis_polyacanthus
ENSLBEG00000023118	alyref	90	52.045	ENSACIG00000020351	-	100	50.000	Amphilophus_citrinellus
ENSLBEG00000023118	alyref	90	83.333	ENSACIG00000006351	alyref	98	82.971	Amphilophus_citrinellus
ENSLBEG00000023118	alyref	90	81.949	ENSAOCG00000014012	alyref	100	87.004	Amphiprion_ocellaris
ENSLBEG00000023118	alyref	88	56.452	ENSAOCG00000019305	-	98	55.870	Amphiprion_ocellaris
ENSLBEG00000023118	alyref	92	81.272	ENSAPEG00000014603	alyref	100	87.004	Amphiprion_percula
ENSLBEG00000023118	alyref	88	57.600	ENSAPEG00000013527	-	98	55.466	Amphiprion_percula
ENSLBEG00000023118	alyref	90	76.512	ENSATEG00000004307	alyref	100	81.851	Anabas_testudineus
ENSLBEG00000023118	alyref	88	59.200	ENSATEG00000000382	-	97	57.600	Anabas_testudineus
ENSLBEG00000023118	alyref	90	84.892	ENSACLG00000008432	alyref	100	85.252	Astatotilapia_calliptera
ENSLBEG00000023118	alyref	88	57.480	ENSACLG00000010184	-	97	55.118	Astatotilapia_calliptera
ENSLBEG00000023118	alyref	89	75.451	ENSAMXG00000007359	alyref	100	74.643	Astyanax_mexicanus
ENSLBEG00000023118	alyref	90	46.479	ENSCING00000013568	-	98	49.213	Ciona_intestinalis
ENSLBEG00000023118	alyref	90	44.245	ENSCSAVG00000003324	-	98	46.800	Ciona_savignyi
ENSLBEG00000023118	alyref	90	78.417	ENSCSEG00000017800	alyref	100	80.216	Cynoglossus_semilaevis
ENSLBEG00000023118	alyref	90	80.000	ENSCVAG00000014869	alyref	100	84.364	Cyprinodon_variegatus
ENSLBEG00000023118	alyref	88	51.004	ENSCVAG00000007789	-	97	51.004	Cyprinodon_variegatus
ENSLBEG00000023118	alyref	91	76.512	ENSDARG00000077732	alyref	100	75.714	Danio_rerio
ENSLBEG00000023118	alyref	87	44.928	FBgn0010774	Ref1	98	40.672	Drosophila_melanogaster
ENSLBEG00000023118	alyref	90	49.451	ENSEBUG00000008253	alyref	95	50.916	Eptatretus_burgeri
ENSLBEG00000023118	alyref	90	38.931	ENSEBUG00000006305	alyref	100	40.392	Eptatretus_burgeri
ENSLBEG00000023118	alyref	90	68.846	ENSELUG00000008849	-	100	66.901	Esox_lucius
ENSLBEG00000023118	alyref	90	75.725	ENSELUG00000017178	alyref	100	71.119	Esox_lucius
ENSLBEG00000023118	alyref	57	78.395	ENSFALG00000011923	-	96	74.675	Ficedula_albicollis
ENSLBEG00000023118	alyref	88	51.807	ENSFHEG00000004698	-	97	51.406	Fundulus_heteroclitus
ENSLBEG00000023118	alyref	90	84.727	ENSFHEG00000019426	alyref	100	84.000	Fundulus_heteroclitus
ENSLBEG00000023118	alyref	90	69.314	ENSGMOG00000009882	alyref	100	67.148	Gadus_morhua
ENSLBEG00000023118	alyref	66	60.938	ENSGMOG00000013122	-	100	59.375	Gadus_morhua
ENSLBEG00000023118	alyref	90	84.727	ENSGAFG00000006014	alyref	100	81.818	Gambusia_affinis
ENSLBEG00000023118	alyref	88	51.406	ENSGAFG00000007573	-	97	49.398	Gambusia_affinis
ENSLBEG00000023118	alyref	88	57.752	ENSHBUG00000001454	-	97	54.198	Haplochromis_burtoni
ENSLBEG00000023118	alyref	90	84.892	ENSHBUG00000020196	alyref	100	85.252	Haplochromis_burtoni
ENSLBEG00000023118	alyref	90	52.157	ENSHCOG00000012825	-	96	50.980	Hippocampus_comes
ENSLBEG00000023118	alyref	90	74.101	ENSIPUG00000009469	alyref	100	72.662	Ictalurus_punctatus
ENSLBEG00000023118	alyref	68	64.362	ENSSTOG00000016570	-	92	60.209	Ictidomys_tridecemlineatus
ENSLBEG00000023118	alyref	88	55.600	ENSKMAG00000006462	-	97	54.839	Kryptolebias_marmoratus
ENSLBEG00000023118	alyref	90	79.422	ENSKMAG00000008912	alyref	100	78.853	Kryptolebias_marmoratus
ENSLBEG00000023118	alyref	75	67.593	ENSLOCG00000013879	alyref	89	68.056	Lepisosteus_oculatus
ENSLBEG00000023118	alyref	88	55.242	ENSMAMG00000005464	-	98	53.414	Mastacembelus_armatus
ENSLBEG00000023118	alyref	90	80.935	ENSMAMG00000003034	alyref	100	83.094	Mastacembelus_armatus
ENSLBEG00000023118	alyref	90	84.892	ENSMZEG00005008639	alyref	100	85.252	Maylandia_zebra
ENSLBEG00000023118	alyref	88	57.087	ENSMZEG00005012096	-	97	55.294	Maylandia_zebra
ENSLBEG00000023118	alyref	90	51.394	ENSMMOG00000007032	-	99	50.996	Mola_mola
ENSLBEG00000023118	alyref	93	81.272	ENSMMOG00000012458	alyref	100	81.979	Mola_mola
ENSLBEG00000023118	alyref	88	56.371	ENSMALG00000006054	-	98	52.344	Monopterus_albus
ENSLBEG00000023118	alyref	90	53.623	ENSMLUG00000006521	-	98	56.272	Myotis_lucifugus
ENSLBEG00000023118	alyref	89	58.394	ENSMLUG00000030671	-	98	55.839	Myotis_lucifugus
ENSLBEG00000023118	alyref	90	54.452	ENSMLUG00000014372	-	98	56.835	Myotis_lucifugus
ENSLBEG00000023118	alyref	89	55.000	ENSMLUG00000022467	-	98	52.688	Myotis_lucifugus
ENSLBEG00000023118	alyref	89	56.089	ENSMLUG00000022178	-	98	53.704	Myotis_lucifugus
ENSLBEG00000023118	alyref	89	55.235	ENSMLUG00000028605	-	98	51.986	Myotis_lucifugus
ENSLBEG00000023118	alyref	90	57.407	ENSMLUG00000004098	-	98	58.397	Myotis_lucifugus
ENSLBEG00000023118	alyref	89	52.536	ENSMLUG00000009247	-	98	51.119	Myotis_lucifugus
ENSLBEG00000023118	alyref	90	66.532	ENSNGAG00000022014	-	100	64.567	Nannospalax_galili
ENSLBEG00000023118	alyref	90	56.757	ENSNBRG00000017460	-	100	54.440	Neolamprologus_brichardi
ENSLBEG00000023118	alyref	90	85.612	ENSNBRG00000001747	alyref	100	85.252	Neolamprologus_brichardi
ENSLBEG00000023118	alyref	88	59.761	ENSONIG00000003296	-	97	57.371	Oreochromis_niloticus
ENSLBEG00000023118	alyref	90	81.139	ENSONIG00000019434	alyref	100	82.918	Oreochromis_niloticus
ENSLBEG00000023118	alyref	92	42.671	ENSORLG00000001620	-	50	59.880	Oryzias_latipes
ENSLBEG00000023118	alyref	94	48.339	ENSORLG00020015673	-	97	52.439	Oryzias_latipes_hni
ENSLBEG00000023118	alyref	89	85.662	ENSORLG00020011942	alyref	100	86.182	Oryzias_latipes_hni
ENSLBEG00000023118	alyref	88	54.000	ENSORLG00015015143	-	97	53.629	Oryzias_latipes_hsok
ENSLBEG00000023118	alyref	89	88.603	ENSORLG00015022664	alyref	100	85.091	Oryzias_latipes_hsok
ENSLBEG00000023118	alyref	90	88.000	ENSOMEG00000019176	alyref	100	82.909	Oryzias_melastigma
ENSLBEG00000023118	alyref	88	54.435	ENSOMEG00000007158	-	97	51.417	Oryzias_melastigma
ENSLBEG00000023118	alyref	67	75.269	ENSPPAG00000036403	-	68	71.277	Pan_paniscus
ENSLBEG00000023118	alyref	88	74.708	ENSPKIG00000006233	-	83	67.528	Paramormyrops_kingsleyae
ENSLBEG00000023118	alyref	90	70.036	ENSPKIG00000007070	alyref	100	67.391	Paramormyrops_kingsleyae
ENSLBEG00000023118	alyref	98	73.841	ENSPMGG00000016600	alyref	91	80.797	Periophthalmus_magnuspinnatus
ENSLBEG00000023118	alyref	62	52.000	ENSPMGG00000012994	-	97	50.000	Periophthalmus_magnuspinnatus
ENSLBEG00000023118	alyref	90	67.470	ENSPEMG00000016628	-	100	64.000	Peromyscus_maniculatus_bairdii
ENSLBEG00000023118	alyref	88	50.980	ENSPFOG00000017094	-	97	49.398	Poecilia_formosa
ENSLBEG00000023118	alyref	90	84.364	ENSPFOG00000022825	alyref	99	82.545	Poecilia_formosa
ENSLBEG00000023118	alyref	90	83.636	ENSPLAG00000006948	alyref	100	80.364	Poecilia_latipinna
ENSLBEG00000023118	alyref	88	50.980	ENSPLAG00000014380	-	97	49.398	Poecilia_latipinna
ENSLBEG00000023118	alyref	88	50.980	ENSPMEG00000023039	-	97	49.398	Poecilia_mexicana
ENSLBEG00000023118	alyref	92	83.630	ENSPMEG00000003547	alyref	100	82.545	Poecilia_mexicana
ENSLBEG00000023118	alyref	90	84.000	ENSPREG00000015795	alyref	100	80.727	Poecilia_reticulata
ENSLBEG00000023118	alyref	90	50.579	ENSPREG00000003649	-	100	48.473	Poecilia_reticulata
ENSLBEG00000023118	alyref	88	56.250	ENSPNYG00000002879	-	98	53.516	Pundamilia_nyererei
ENSLBEG00000023118	alyref	90	84.892	ENSPNYG00000017498	alyref	100	85.252	Pundamilia_nyererei
ENSLBEG00000023118	alyref	93	73.077	ENSPNAG00000002531	alyref	100	72.302	Pygocentrus_nattereri
ENSLBEG00000023118	alyref	81	66.814	ENSSBOG00000030924	-	87	68.367	Saimiri_boliviensis_boliviensis
ENSLBEG00000023118	alyref	89	58.468	ENSSHAG00000000609	-	99	58.300	Sarcophilus_harrisii
ENSLBEG00000023118	alyref	89	55.344	ENSSHAG00000012866	-	99	52.692	Sarcophilus_harrisii
ENSLBEG00000023118	alyref	67	76.720	ENSSFOG00015003678	alyref	84	70.000	Scleropages_formosus
ENSLBEG00000023118	alyref	75	75.355	ENSSFOG00015003923	alyref	73	71.090	Scleropages_formosus
ENSLBEG00000023118	alyref	90	86.232	ENSSMAG00000009283	alyref	99	85.714	Scophthalmus_maximus
ENSLBEG00000023118	alyref	88	53.725	ENSSMAG00000011169	-	100	58.011	Scophthalmus_maximus
ENSLBEG00000023118	alyref	90	83.032	ENSSDUG00000016158	alyref	100	88.087	Seriola_dumerili
ENSLBEG00000023118	alyref	90	80.216	ENSSLDG00000017803	alyref	100	84.173	Seriola_lalandi_dorsalis
ENSLBEG00000023118	alyref	89	58.800	ENSSPAG00000017028	-	96	57.200	Stegastes_partitus
ENSLBEG00000023118	alyref	90	52.490	ENSTRUG00000003051	-	100	53.282	Takifugu_rubripes
ENSLBEG00000023118	alyref	90	80.392	ENSTNIG00000011595	alyref	100	79.608	Tetraodon_nigroviridis
ENSLBEG00000023118	alyref	90	53.150	ENSTNIG00000014136	-	100	49.004	Tetraodon_nigroviridis
ENSLBEG00000023118	alyref	68	73.016	ENSVVUG00000000272	-	82	69.519	Vulpes_vulpes
ENSLBEG00000023118	alyref	90	85.455	ENSXCOG00000018047	alyref	99	82.545	Xiphophorus_couchianus
ENSLBEG00000023118	alyref	90	85.455	ENSXMAG00000012218	alyref	99	82.545	Xiphophorus_maculatus
ENSLBEG00000023118	alyref	88	51.587	ENSXMAG00000018086	-	99	50.598	Xiphophorus_maculatus