EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000023225 (Gene tree)
Gene ID: 109996210
Gene Symbol: lrpprc
Alias: fc13c04|im:7150924|im:7151572|wu:fc13c04|wu:fj38h02
Full Name: leucine rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 56404 bases
Position: chrFKLU01000355.1:284098-340501
Accession: 109996210
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000030951	PPR	PF01535.20	9.1e-24	1	2
ENSLBEP00000030951	PPR	PF01535.20	9.1e-24	2	2
ENSLBEP00000030987	PPR	PF01535.20	1.1e-22	1	2
ENSLBEP00000030987	PPR	PF01535.20	1.1e-22	2	2
ENSLBEP00000031004	PPR	PF01535.20	4.8e-17	1	2
ENSLBEP00000031004	PPR	PF01535.20	4.8e-17	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000032368	-	4113	XM_020650240	ENSLBEP00000030951	1370 (aa)	XP_020505896	-
ENSLBET00000032404	-	3579	-	ENSLBEP00000030987	1192 (aa)	-	-
ENSLBET00000032421	-	1533	-	ENSLBEP00000031004	510 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000023225's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000023225's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000023225	lrpprc	96	72.568	ENSAPOG00000016610	lrpprc	100	64.316	Acanthochromis_polyacanthus
ENSLBEG00000023225	lrpprc	95	57.434	ENSAMEG00000005852	LRPPRC	97	51.087	Ailuropoda_melanoleuca
ENSLBEG00000023225	lrpprc	96	73.346	ENSACIG00000009604	lrpprc	99	62.781	Amphilophus_citrinellus
ENSLBEG00000023225	lrpprc	96	73.152	ENSAOCG00000005886	lrpprc	100	64.665	Amphiprion_ocellaris
ENSLBEG00000023225	lrpprc	96	73.633	ENSAPEG00000002937	lrpprc	98	63.585	Amphiprion_percula
ENSLBEG00000023225	lrpprc	96	75.256	ENSATEG00000010555	lrpprc	95	76.222	Anabas_testudineus
ENSLBEG00000023225	lrpprc	89	58.333	ENSACAG00000029278	LRPPRC	94	55.490	Anolis_carolinensis
ENSLBEG00000023225	lrpprc	96	57.058	ENSANAG00000027440	LRPPRC	93	57.058	Aotus_nancymaae
ENSLBEG00000023225	lrpprc	91	76.180	ENSACLG00000023712	lrpprc	92	77.440	Astatotilapia_calliptera
ENSLBEG00000023225	lrpprc	96	60.913	ENSAMXG00000004245	-	95	61.100	Astyanax_mexicanus
ENSLBEG00000023225	lrpprc	90	58.568	ENSCJAG00000000794	LRPPRC	93	55.340	Callithrix_jacchus
ENSLBEG00000023225	lrpprc	98	51.423	ENSCHIG00000020173	LRPPRC	99	47.829	Capra_hircus
ENSLBEG00000023225	lrpprc	87	49.667	ENSCAPG00000013631	LRPPRC	99	40.091	Cavia_aperea
ENSLBEG00000023225	lrpprc	84	48.857	ENSCPOG00000000204	LRPPRC	97	48.616	Cavia_porcellus
ENSLBEG00000023225	lrpprc	95	57.315	ENSCCAG00000031900	LRPPRC	98	54.098	Cebus_capucinus
ENSLBEG00000023225	lrpprc	96	56.262	ENSCATG00000014187	LRPPRC	93	56.262	Cercocebus_atys
ENSLBEG00000023225	lrpprc	99	50.000	ENSCLAG00000005203	LRPPRC	99	44.864	Chinchilla_lanigera
ENSLBEG00000023225	lrpprc	96	55.666	ENSCSAG00000013233	LRPPRC	99	45.378	Chlorocebus_sabaeus
ENSLBEG00000023225	lrpprc	96	55.357	ENSCHOG00000003631	LRPPRC	84	46.742	Choloepus_hoffmanni
ENSLBEG00000023225	lrpprc	93	51.123	ENSCANG00000034961	LRPPRC	99	68.421	Colobus_angolensis_palliatus
ENSLBEG00000023225	lrpprc	96	55.709	ENSCGRG00001016261	Lrpprc	99	46.601	Cricetulus_griseus_chok1gshd
ENSLBEG00000023225	lrpprc	96	55.709	ENSCGRG00000004072	Lrpprc	99	46.601	Cricetulus_griseus_crigri
ENSLBEG00000023225	lrpprc	96	59.063	ENSCSEG00000003850	lrpprc	97	59.063	Cynoglossus_semilaevis
ENSLBEG00000023225	lrpprc	96	72.763	ENSCVAG00000012967	lrpprc	100	64.521	Cyprinodon_variegatus
ENSLBEG00000023225	lrpprc	96	60.845	ENSDARG00000043970	lrpprc	98	53.361	Danio_rerio
ENSLBEG00000023225	lrpprc	95	48.163	ENSDNOG00000032336	-	97	41.336	Dasypus_novemcinctus
ENSLBEG00000023225	lrpprc	96	55.467	ENSDNOG00000012594	-	99	46.606	Dasypus_novemcinctus
ENSLBEG00000023225	lrpprc	86	59.368	ENSDORG00000012233	Lrpprc	99	46.499	Dipodomys_ordii
ENSLBEG00000023225	lrpprc	96	56.859	ENSETEG00000006657	LRPPRC	99	47.453	Echinops_telfairi
ENSLBEG00000023225	lrpprc	87	52.212	ENSEBUG00000015884	-	95	52.212	Eptatretus_burgeri
ENSLBEG00000023225	lrpprc	88	53.125	ENSEEUG00000012340	LRPPRC	80	54.126	Erinaceus_europaeus
ENSLBEG00000023225	lrpprc	94	57.815	ENSELUG00000012803	lrpprc	96	59.896	Esox_lucius
ENSLBEG00000023225	lrpprc	96	57.738	ENSFCAG00000013468	LRPPRC	99	47.129	Felis_catus
ENSLBEG00000023225	lrpprc	88	56.920	ENSFALG00000012738	LRPPRC	99	45.180	Ficedula_albicollis
ENSLBEG00000023225	lrpprc	95	53.557	ENSFDAG00000015328	LRPPRC	99	45.119	Fukomys_damarensis
ENSLBEG00000023225	lrpprc	96	72.179	ENSFHEG00000019604	lrpprc	100	62.465	Fundulus_heteroclitus
ENSLBEG00000023225	lrpprc	98	69.980	ENSGMOG00000008337	lrpprc	99	55.930	Gadus_morhua
ENSLBEG00000023225	lrpprc	96	71.984	ENSGAFG00000001455	lrpprc	99	63.073	Gambusia_affinis
ENSLBEG00000023225	lrpprc	98	76.998	ENSGACG00000010679	lrpprc	99	64.254	Gasterosteus_aculeatus
ENSLBEG00000023225	lrpprc	79	60.197	ENSGGOG00000041704	-	99	60.197	Gorilla_gorilla
ENSLBEG00000023225	lrpprc	98	71.970	ENSHBUG00000000393	lrpprc	98	65.852	Haplochromis_burtoni
ENSLBEG00000023225	lrpprc	96	53.922	ENSHGLG00000006123	LRPPRC	97	49.657	Heterocephalus_glaber_female
ENSLBEG00000023225	lrpprc	53	53.118	ENSHGLG00100005960	-	93	52.425	Heterocephalus_glaber_male
ENSLBEG00000023225	lrpprc	96	71.401	ENSHCOG00000002107	lrpprc	100	63.075	Hippocampus_comes
ENSLBEG00000023225	lrpprc	96	65.692	ENSIPUG00000009406	lrpprc	99	56.298	Ictalurus_punctatus
ENSLBEG00000023225	lrpprc	96	56.175	ENSSTOG00000011185	LRPPRC	99	46.283	Ictidomys_tridecemlineatus
ENSLBEG00000023225	lrpprc	96	54.839	ENSJJAG00000020475	Lrpprc	99	46.348	Jaculus_jaculus
ENSLBEG00000023225	lrpprc	92	65.182	ENSKMAG00000003287	lrpprc	85	56.476	Kryptolebias_marmoratus
ENSLBEG00000023225	lrpprc	95	61.024	ENSLACG00000014030	LRPPRC	99	52.533	Latimeria_chalumnae
ENSLBEG00000023225	lrpprc	95	64.808	ENSLOCG00000016390	lrpprc	97	56.346	Lepisosteus_oculatus
ENSLBEG00000023225	lrpprc	96	55.138	ENSLAFG00000008614	LRPPRC	97	48.541	Loxodonta_africana
ENSLBEG00000023225	lrpprc	96	56.064	ENSMFAG00000041560	LRPPRC	99	67.982	Macaca_fascicularis
ENSLBEG00000023225	lrpprc	95	55.888	ENSMMUG00000019841	LRPPRC	99	53.799	Macaca_mulatta
ENSLBEG00000023225	lrpprc	96	56.064	ENSMNEG00000031613	LRPPRC	93	56.064	Macaca_nemestrina
ENSLBEG00000023225	lrpprc	97	73.347	ENSMAMG00000021835	lrpprc	98	60.641	Mastacembelus_armatus
ENSLBEG00000023225	lrpprc	98	71.780	ENSMZEG00005027379	lrpprc	99	65.712	Maylandia_zebra
ENSLBEG00000023225	lrpprc	96	55.709	ENSMAUG00000012118	Lrpprc	99	47.601	Mesocricetus_auratus
ENSLBEG00000023225	lrpprc	96	56.746	ENSMICG00000010486	LRPPRC	93	56.746	Microcebus_murinus
ENSLBEG00000023225	lrpprc	96	56.102	ENSMOCG00000006048	Lrpprc	98	52.485	Microtus_ochrogaster
ENSLBEG00000023225	lrpprc	99	73.092	ENSMMOG00000007830	lrpprc	95	76.938	Mola_mola
ENSLBEG00000023225	lrpprc	88	57.930	ENSMODG00000000648	LRPPRC	86	59.497	Monodelphis_domestica
ENSLBEG00000023225	lrpprc	98	68.121	ENSMALG00000001271	lrpprc	99	62.596	Monopterus_albus
ENSLBEG00000023225	lrpprc	96	57.853	ENSMPUG00000011800	LRPPRC	97	51.953	Mustela_putorius_furo
ENSLBEG00000023225	lrpprc	96	56.548	ENSMLUG00000010575	LRPPRC	99	46.411	Myotis_lucifugus
ENSLBEG00000023225	lrpprc	96	55.090	ENSNGAG00000013069	Lrpprc	99	46.278	Nannospalax_galili
ENSLBEG00000023225	lrpprc	88	78.492	ENSNBRG00000013202	lrpprc	92	78.444	Neolamprologus_brichardi
ENSLBEG00000023225	lrpprc	96	56.064	ENSNLEG00000016782	LRPPRC	93	56.064	Nomascus_leucogenys
ENSLBEG00000023225	lrpprc	82	57.269	ENSOPRG00000016774	LRPPRC	86	57.269	Ochotona_princeps
ENSLBEG00000023225	lrpprc	96	54.813	ENSODEG00000011211	LRPPRC	99	45.359	Octodon_degus
ENSLBEG00000023225	lrpprc	98	72.727	ENSONIG00000000917	lrpprc	100	64.446	Oreochromis_niloticus
ENSLBEG00000023225	lrpprc	53	43.185	ENSOANG00000014670	-	100	43.316	Ornithorhynchus_anatinus
ENSLBEG00000023225	lrpprc	96	56.262	ENSOCUG00000015046	LRPPRC	88	54.921	Oryctolagus_cuniculus
ENSLBEG00000023225	lrpprc	98	71.756	ENSORLG00000004605	lrpprc	99	59.104	Oryzias_latipes
ENSLBEG00000023225	lrpprc	79	74.321	ENSORLG00020012536	lrpprc	99	60.808	Oryzias_latipes_hni
ENSLBEG00000023225	lrpprc	96	74.898	ENSORLG00015018270	lrpprc	94	74.694	Oryzias_latipes_hsok
ENSLBEG00000023225	lrpprc	96	73.441	ENSOMEG00000011863	-	98	73.735	Oryzias_melastigma
ENSLBEG00000023225	lrpprc	96	55.268	ENSOGAG00000012798	LRPPRC	98	50.292	Otolemur_garnettii
ENSLBEG00000023225	lrpprc	94	52.960	ENSOARG00000006522	LRPPRC	99	47.120	Ovis_aries
ENSLBEG00000023225	lrpprc	96	55.467	ENSPPAG00000040876	LRPPRC	93	55.865	Pan_paniscus
ENSLBEG00000023225	lrpprc	96	58.135	ENSPPRG00000006578	LRPPRC	99	47.063	Panthera_pardus
ENSLBEG00000023225	lrpprc	89	60.087	ENSPTIG00000000933	LRPPRC	97	47.953	Panthera_tigris_altaica
ENSLBEG00000023225	lrpprc	96	56.461	ENSPTRG00000011880	LRPPRC	93	56.461	Pan_troglodytes
ENSLBEG00000023225	lrpprc	96	55.865	ENSPANG00000020731	LRPPRC	93	55.865	Papio_anubis
ENSLBEG00000023225	lrpprc	97	56.078	ENSPKIG00000022232	lrpprc	98	56.078	Paramormyrops_kingsleyae
ENSLBEG00000023225	lrpprc	61	46.667	ENSPSIG00000006830	-	98	46.682	Pelodiscus_sinensis
ENSLBEG00000023225	lrpprc	65	54.925	ENSPMGG00000016597	lrpprc	96	55.027	Periophthalmus_magnuspinnatus
ENSLBEG00000023225	lrpprc	88	73.333	ENSPMGG00000013171	-	95	74.630	Periophthalmus_magnuspinnatus
ENSLBEG00000023225	lrpprc	83	56.840	ENSPMAG00000002147	lrpprc	99	41.456	Petromyzon_marinus
ENSLBEG00000023225	lrpprc	96	71.401	ENSPFOG00000011227	lrpprc	99	62.771	Poecilia_formosa
ENSLBEG00000023225	lrpprc	96	71.206	ENSPLAG00000004018	lrpprc	99	62.561	Poecilia_latipinna
ENSLBEG00000023225	lrpprc	96	71.012	ENSPMEG00000016425	lrpprc	99	62.561	Poecilia_mexicana
ENSLBEG00000023225	lrpprc	96	70.428	ENSPREG00000003662	lrpprc	99	62.105	Poecilia_reticulata
ENSLBEG00000023225	lrpprc	52	52.133	ENSPPYG00000029532	-	99	42.998	Pongo_abelii
ENSLBEG00000023225	lrpprc	96	55.882	ENSPCAG00000001430	LRPPRC	79	55.754	Procavia_capensis
ENSLBEG00000023225	lrpprc	96	55.382	ENSPVAG00000002007	LRPPRC	99	45.073	Pteropus_vampyrus
ENSLBEG00000023225	lrpprc	98	73.307	ENSPNYG00000000756	lrpprc	90	75.551	Pundamilia_nyererei
ENSLBEG00000023225	lrpprc	96	66.862	ENSPNAG00000002895	lrpprc	99	58.547	Pygocentrus_nattereri
ENSLBEG00000023225	lrpprc	96	54.781	ENSRNOG00000005877	Lrpprc	99	45.531	Rattus_norvegicus
ENSLBEG00000023225	lrpprc	96	56.064	ENSRBIG00000031552	LRPPRC	99	45.625	Rhinopithecus_bieti
ENSLBEG00000023225	lrpprc	96	56.262	ENSRROG00000042793	-	93	56.262	Rhinopithecus_roxellana
ENSLBEG00000023225	lrpprc	96	56.461	ENSSBOG00000011807	LRPPRC	93	56.461	Saimiri_boliviensis_boliviensis
ENSLBEG00000023225	lrpprc	87	57.753	ENSSHAG00000018725	LRPPRC	99	46.519	Sarcophilus_harrisii
ENSLBEG00000023225	lrpprc	96	57.422	ENSSFOG00015001042	lrpprc	99	49.965	Scleropages_formosus
ENSLBEG00000023225	lrpprc	100	64.990	ENSSMAG00000016811	-	99	67.460	Scophthalmus_maximus
ENSLBEG00000023225	lrpprc	96	72.656	ENSSDUG00000019062	lrpprc	99	64.545	Seriola_dumerili
ENSLBEG00000023225	lrpprc	97	62.575	ENSSLDG00000023028	lrpprc	100	58.148	Seriola_lalandi_dorsalis
ENSLBEG00000023225	lrpprc	81	58.961	ENSSARG00000000426	LRPPRC	93	58.961	Sorex_araneus
ENSLBEG00000023225	lrpprc	98	67.614	ENSSPAG00000000162	lrpprc	100	59.170	Stegastes_partitus
ENSLBEG00000023225	lrpprc	96	56.582	ENSSSCG00000008452	LRPPRC	99	46.601	Sus_scrofa
ENSLBEG00000023225	lrpprc	88	59.759	ENSTGUG00000003759	LRPPRC	93	59.759	Taeniopygia_guttata
ENSLBEG00000023225	lrpprc	96	73.256	ENSTRUG00000008409	lrpprc	96	63.037	Takifugu_rubripes
ENSLBEG00000023225	lrpprc	96	71.429	ENSTNIG00000007470	lrpprc	99	61.369	Tetraodon_nigroviridis
ENSLBEG00000023225	lrpprc	98	49.515	ENSTTRG00000006403	LRPPRC	99	46.003	Tursiops_truncatus
ENSLBEG00000023225	lrpprc	85	62.402	ENSVPAG00000008993	LRPPRC	83	62.240	Vicugna_pacos
ENSLBEG00000023225	lrpprc	96	59.514	ENSXETG00000009296	lrpprc	99	50.175	Xenopus_tropicalis
ENSLBEG00000023225	lrpprc	97	68.889	ENSXCOG00000013343	lrpprc	96	68.889	Xiphophorus_couchianus
ENSLBEG00000023225	lrpprc	96	70.428	ENSXMAG00000018108	lrpprc	99	62.227	Xiphophorus_maculatus