EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000023352 (Gene tree)
Gene ID: 109997843
Gene Symbol: gpatch8
Alias: fa12a04|fb30h12|gpatc8|wu:fa12a04|wu:fb30h12|wu:fj32a09
Full Name: G-patch domain containing 8
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 23791 bases
Position: chrFKLU01000444.1:288329-312119
Accession: 109997843
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000030931	zf-C2H2_jaz	PF12171.8	6e-06	1	1
ENSLBEP00000030923	zf-C2H2_jaz	PF12171.8	6.3e-06	1	1
ENSLBEP00000030923	G-patch	PF01585.23	6.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000032348	-	4372	XM_020652467	ENSLBEP00000030931	1428 (aa)	XP_020508123	UPI0009B38CBA
ENSLBET00000032340	-	4640	XM_020652466	ENSLBEP00000030923	1491 (aa)	XP_020508122	UPI0009B4E3DF

Gene Model

Click here to download ENSLBEG00000023352's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000023352's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000023352	gpatch8	100	85.829	ENSAPOG00000023938	gpatch8	100	85.762	Acanthochromis_polyacanthus
ENSLBEG00000023352	gpatch8	100	83.278	ENSACIG00000012241	gpatch8	100	83.344	Amphilophus_citrinellus
ENSLBEG00000023352	gpatch8	100	85.762	ENSAOCG00000018102	gpatch8	100	85.695	Amphiprion_ocellaris
ENSLBEG00000023352	gpatch8	100	85.762	ENSAPEG00000016776	gpatch8	100	85.695	Amphiprion_percula
ENSLBEG00000023352	gpatch8	100	84.873	ENSATEG00000003247	gpatch8	100	84.605	Anabas_testudineus
ENSLBEG00000023352	gpatch8	100	82.722	ENSACLG00000004165	gpatch8	100	82.455	Astatotilapia_calliptera
ENSLBEG00000023352	gpatch8	100	81.338	ENSCSEG00000021277	gpatch8	100	81.338	Cynoglossus_semilaevis
ENSLBEG00000023352	gpatch8	100	79.427	ENSCVAG00000013477	gpatch8	100	79.561	Cyprinodon_variegatus
ENSLBEG00000023352	gpatch8	100	63.388	ENSDARG00000059768	gpatch8	56	60.070	Danio_rerio
ENSLBEG00000023352	gpatch8	61	64.382	ENSELUG00000019920	gpatch8	57	65.114	Esox_lucius
ENSLBEG00000023352	gpatch8	56	71.599	ENSFHEG00000005791	gpatch8	100	78.007	Fundulus_heteroclitus
ENSLBEG00000023352	gpatch8	100	79.640	ENSGAFG00000018138	gpatch8	100	79.640	Gambusia_affinis
ENSLBEG00000023352	gpatch8	100	82.745	ENSHBUG00000002669	gpatch8	100	82.811	Haplochromis_burtoni
ENSLBEG00000023352	gpatch8	76	56.894	ENSHGLG00100010738	GPATCH8	95	55.748	Heterocephalus_glaber_male
ENSLBEG00000023352	gpatch8	100	73.488	ENSHCOG00000017518	gpatch8	100	72.757	Hippocampus_comes
ENSLBEG00000023352	gpatch8	59	60.131	ENSIPUG00000015431	gpatch8	100	59.508	Ictalurus_punctatus
ENSLBEG00000023352	gpatch8	100	79.569	ENSKMAG00000018364	gpatch8	100	80.360	Kryptolebias_marmoratus
ENSLBEG00000023352	gpatch8	61	77.778	ENSLOCG00000012265	gpatch8	70	74.648	Lepisosteus_oculatus
ENSLBEG00000023352	gpatch8	99	85.664	ENSMAMG00000001618	gpatch8	100	85.664	Mastacembelus_armatus
ENSLBEG00000023352	gpatch8	100	82.789	ENSMZEG00005022584	gpatch8	100	82.522	Maylandia_zebra
ENSLBEG00000023352	gpatch8	61	81.046	ENSMMOG00000020472	gpatch8	96	80.457	Mola_mola
ENSLBEG00000023352	gpatch8	100	82.588	ENSMALG00000004204	gpatch8	100	83.256	Monopterus_albus
ENSLBEG00000023352	gpatch8	100	83.189	ENSNBRG00000016402	gpatch8	100	82.989	Neolamprologus_brichardi
ENSLBEG00000023352	gpatch8	100	80.107	ENSONIG00000001292	gpatch8	100	81.304	Oreochromis_niloticus
ENSLBEG00000023352	gpatch8	56	72.544	ENSORLG00000028497	gpatch8	100	78.065	Oryzias_latipes
ENSLBEG00000023352	gpatch8	61	53.383	ENSPKIG00000018753	gpatch8	56	55.297	Paramormyrops_kingsleyae
ENSLBEG00000023352	gpatch8	56	54.695	ENSPKIG00000004860	GPATCH8	50	56.085	Paramormyrops_kingsleyae
ENSLBEG00000023352	gpatch8	100	76.872	ENSPMGG00000000730	gpatch8	99	77.025	Periophthalmus_magnuspinnatus
ENSLBEG00000023352	gpatch8	100	79.400	ENSPFOG00000014833	gpatch8	100	79.733	Poecilia_formosa
ENSLBEG00000023352	gpatch8	100	79.133	ENSPLAG00000001035	gpatch8	100	79.467	Poecilia_latipinna
ENSLBEG00000023352	gpatch8	100	79.867	ENSPMEG00000024032	gpatch8	100	79.867	Poecilia_mexicana
ENSLBEG00000023352	gpatch8	100	80.000	ENSPREG00000008911	gpatch8	100	79.933	Poecilia_reticulata
ENSLBEG00000023352	gpatch8	100	82.855	ENSPNYG00000009426	gpatch8	100	82.588	Pundamilia_nyererei
ENSLBEG00000023352	gpatch8	59	60.691	ENSPNAG00000016200	gpatch8	58	62.529	Pygocentrus_nattereri
ENSLBEG00000023352	gpatch8	56	59.181	ENSSFOG00015004299	GPATCH8	51	60.799	Scleropages_formosus
ENSLBEG00000023352	gpatch8	55	54.918	ENSSFOG00015021377	-	55	53.684	Scleropages_formosus
ENSLBEG00000023352	gpatch8	100	85.714	ENSSDUG00000018065	gpatch8	100	85.714	Seriola_dumerili
ENSLBEG00000023352	gpatch8	100	86.693	ENSSLDG00000009225	gpatch8	100	86.760	Seriola_lalandi_dorsalis
ENSLBEG00000023352	gpatch8	100	85.896	ENSSPAG00000011368	gpatch8	100	85.896	Stegastes_partitus
ENSLBEG00000023352	gpatch8	100	77.164	ENSTRUG00000020474	gpatch8	100	77.164	Takifugu_rubripes
ENSLBEG00000023352	gpatch8	61	61.511	ENSTBEG00000009486	GPATCH8	58	61.151	Tupaia_belangeri
ENSLBEG00000023352	gpatch8	100	78.923	ENSXCOG00000016680	gpatch8	100	78.856	Xiphophorus_couchianus
ENSLBEG00000023352	gpatch8	100	79.308	ENSXMAG00000009217	gpatch8	100	79.242	Xiphophorus_maculatus