EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000023388 (Gene tree)
Gene ID: 110003309
Gene Symbol: -
Alias: -
Full Name: scratch family transcriptional repressor 1
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 11335 bases
Position: chrFKLU01001158.1:38781-50115
Accession: 110003309
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000030949	zf-C2H2	PF00096.26	4.7e-25	1	4
ENSLBEP00000030949	zf-C2H2	PF00096.26	4.7e-25	2	4
ENSLBEP00000030949	zf-C2H2	PF00096.26	4.7e-25	3	4
ENSLBEP00000030949	zf-C2H2	PF00096.26	4.7e-25	4	4
ENSLBEP00000030949	zf-met	PF12874.7	1.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000032366	-	4735	XM_020658900	ENSLBEP00000030949	297 (aa)	XP_020514556	UPI0009B318A3

Gene Model

Click here to download ENSLBEG00000023388's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000023388's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000023388	-	52	37.500	ENSLBEG00000022736	prdm5	57	38.060
ENSLBEG00000023388	-	52	44.706	ENSLBEG00000015694	-	76	38.806
ENSLBEG00000023388	-	51	47.945	ENSLBEG00000009567	-	51	49.333
ENSLBEG00000023388	-	52	37.838	ENSLBEG00000001756	-	86	38.971
ENSLBEG00000023388	-	57	40.698	ENSLBEG00000009580	-	64	40.698
ENSLBEG00000023388	-	62	43.243	ENSLBEG00000008115	-	86	37.000
ENSLBEG00000023388	-	97	59.190	ENSLBEG00000015419	scrt2	97	58.255
ENSLBEG00000023388	-	50	42.353	ENSLBEG00000000343	-	68	42.697
ENSLBEG00000023388	-	51	41.463	ENSLBEG00000007937	-	66	41.463
ENSLBEG00000023388	-	50	38.710	ENSLBEG00000000373	-	72	38.710
ENSLBEG00000023388	-	52	41.026	ENSLBEG00000028243	-	80	41.026
ENSLBEG00000023388	-	51	40.964	ENSLBEG00000024737	-	93	40.964
ENSLBEG00000023388	-	67	33.835	ENSLBEG00000000393	-	64	35.849
ENSLBEG00000023388	-	67	33.775	ENSLBEG00000008689	-	87	33.775
ENSLBEG00000023388	-	75	33.835	ENSLBEG00000011210	-	66	33.835
ENSLBEG00000023388	-	54	36.842	ENSLBEG00000010278	-	93	35.433
ENSLBEG00000023388	-	59	40.698	ENSLBEG00000002357	-	85	46.667
ENSLBEG00000023388	-	96	33.555	ENSLBEG00000006963	-	99	33.651
ENSLBEG00000023388	-	75	40.860	ENSLBEG00000011465	-	86	40.860
ENSLBEG00000023388	-	55	35.616	ENSLBEG00000008850	-	52	35.616
ENSLBEG00000023388	-	54	43.421	ENSLBEG00000010165	-	87	43.421
ENSLBEG00000023388	-	59	44.737	ENSLBEG00000001132	-	69	44.737
ENSLBEG00000023388	-	51	41.860	ENSLBEG00000018970	-	81	41.860
ENSLBEG00000023388	-	54	40.146	ENSLBEG00000026457	-	88	38.462
ENSLBEG00000023388	-	58	31.579	ENSLBEG00000011986	-	88	32.500
ENSLBEG00000023388	-	66	37.864	ENSLBEG00000017450	-	78	37.864
ENSLBEG00000023388	-	53	36.879	ENSLBEG00000013235	-	79	38.889
ENSLBEG00000023388	-	50	38.043	ENSLBEG00000020128	-	94	38.043
ENSLBEG00000023388	-	63	35.556	ENSLBEG00000014211	-	89	37.903
ENSLBEG00000023388	-	52	40.741	ENSLBEG00000013570	-	96	40.741
ENSLBEG00000023388	-	52	39.623	ENSLBEG00000011091	si:cabz01071911.3	92	39.623
ENSLBEG00000023388	-	50	33.775	ENSLBEG00000012201	-	56	41.379
ENSLBEG00000023388	-	52	34.615	ENSLBEG00000011145	si:cabz01071911.3	74	37.121
ENSLBEG00000023388	-	51	39.860	ENSLBEG00000025696	-	57	41.481
ENSLBEG00000023388	-	58	36.765	ENSLBEG00000001920	-	91	44.000
ENSLBEG00000023388	-	50	41.333	ENSLBEG00000002278	-	60	38.739
ENSLBEG00000023388	-	59	38.261	ENSLBEG00000018509	-	91	38.261
ENSLBEG00000023388	-	50	33.588	ENSLBEG00000005715	-	77	34.513
ENSLBEG00000023388	-	54	34.328	ENSLBEG00000020747	-	89	34.328
ENSLBEG00000023388	-	63	39.640	ENSLBEG00000022939	-	58	39.640
ENSLBEG00000023388	-	53	39.423	ENSLBEG00000024509	-	95	39.423

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000023388	-	100	86.957	ENSAPOG00000015197	-	100	86.957	Acanthochromis_polyacanthus
ENSLBEG00000023388	-	99	75.503	ENSAPOG00000009279	scrt1b	99	74.832	Acanthochromis_polyacanthus
ENSLBEG00000023388	-	97	61.938	ENSAPOG00000003680	scrt2	96	61.592	Acanthochromis_polyacanthus
ENSLBEG00000023388	-	97	60.678	ENSACIG00000012604	scrt2	96	60.339	Amphilophus_citrinellus
ENSLBEG00000023388	-	100	92.308	ENSACIG00000006586	-	100	92.308	Amphilophus_citrinellus
ENSLBEG00000023388	-	99	74.074	ENSACIG00000013613	scrt1b	99	73.401	Amphilophus_citrinellus
ENSLBEG00000023388	-	97	53.651	ENSACIG00000001296	-	96	53.016	Amphilophus_citrinellus
ENSLBEG00000023388	-	99	75.839	ENSAOCG00000003910	scrt1b	99	75.168	Amphiprion_ocellaris
ENSLBEG00000023388	-	97	61.938	ENSAOCG00000021557	scrt2	96	61.592	Amphiprion_ocellaris
ENSLBEG00000023388	-	100	93.645	ENSAOCG00000023304	-	100	93.645	Amphiprion_ocellaris
ENSLBEG00000023388	-	97	61.938	ENSAPEG00000022558	scrt2	96	61.592	Amphiprion_percula
ENSLBEG00000023388	-	99	75.168	ENSAPEG00000000869	scrt1b	99	74.497	Amphiprion_percula
ENSLBEG00000023388	-	100	93.645	ENSAPEG00000005677	-	100	93.645	Amphiprion_percula
ENSLBEG00000023388	-	97	51.212	ENSATEG00000003195	-	97	50.450	Anabas_testudineus
ENSLBEG00000023388	-	100	84.281	ENSATEG00000011660	-	100	84.281	Anabas_testudineus
ENSLBEG00000023388	-	99	74.411	ENSATEG00000002302	scrt1b	99	74.832	Anabas_testudineus
ENSLBEG00000023388	-	97	59.688	ENSATEG00000023998	scrt2	97	59.688	Anabas_testudineus
ENSLBEG00000023388	-	69	79.412	ENSACAG00000016109	SCRT2	91	78.922	Anolis_carolinensis
ENSLBEG00000023388	-	99	75.503	ENSACLG00000007162	scrt1b	99	74.832	Astatotilapia_calliptera
ENSLBEG00000023388	-	100	89.439	ENSACLG00000012046	-	100	89.439	Astatotilapia_calliptera
ENSLBEG00000023388	-	99	73.154	ENSAMXG00000042624	SCRT1	100	72.483	Astyanax_mexicanus
ENSLBEG00000023388	-	84	68.800	ENSAMXG00000034158	scrt2	87	68.400	Astyanax_mexicanus
ENSLBEG00000023388	-	99	77.703	ENSAMXG00000038085	scrt1a	99	77.027	Astyanax_mexicanus
ENSLBEG00000023388	-	87	58.427	ENSCPBG00000027613	SCRT2	100	58.427	Chrysemys_picta_bellii
ENSLBEG00000023388	-	99	75.758	ENSCPBG00000018899	SCRT1	99	75.084	Chrysemys_picta_bellii
ENSLBEG00000023388	-	100	91.304	ENSCSEG00000014892	-	100	91.304	Cynoglossus_semilaevis
ENSLBEG00000023388	-	99	74.074	ENSCSEG00000008596	scrt1b	99	74.161	Cynoglossus_semilaevis
ENSLBEG00000023388	-	97	60.510	ENSCSEG00000021542	scrt2	97	58.280	Cynoglossus_semilaevis
ENSLBEG00000023388	-	97	58.621	ENSCVAG00000021038	scrt2	97	58.621	Cyprinodon_variegatus
ENSLBEG00000023388	-	99	74.497	ENSCVAG00000009561	scrt1b	99	73.826	Cyprinodon_variegatus
ENSLBEG00000023388	-	100	91.973	ENSCVAG00000003190	-	100	91.973	Cyprinodon_variegatus
ENSLBEG00000023388	-	99	75.758	ENSDARG00000040214	scrt1b	99	75.084	Danio_rerio
ENSLBEG00000023388	-	99	77.104	ENSDARG00000100821	scrt1a	99	76.431	Danio_rerio
ENSLBEG00000023388	-	96	61.364	ENSELUG00000023883	scrt2	95	58.730	Esox_lucius
ENSLBEG00000023388	-	99	76.949	ENSELUG00000005435	scrt1b	98	76.271	Esox_lucius
ENSLBEG00000023388	-	100	77.000	ENSELUG00000022228	scrt1a	100	76.333	Esox_lucius
ENSLBEG00000023388	-	67	79.000	ENSFALG00000005718	SCRT2	97	68.000	Ficedula_albicollis
ENSLBEG00000023388	-	97	57.439	ENSFDAG00000008733	SCRT1	97	57.785	Fukomys_damarensis
ENSLBEG00000023388	-	99	74.832	ENSFHEG00000014820	scrt1b	99	74.161	Fundulus_heteroclitus
ENSLBEG00000023388	-	97	64.138	ENSFHEG00000005732	scrt2	96	63.793	Fundulus_heteroclitus
ENSLBEG00000023388	-	100	92.308	ENSFHEG00000009794	-	100	92.308	Fundulus_heteroclitus
ENSLBEG00000023388	-	97	56.289	ENSGMOG00000019519	scrt2	96	55.346	Gadus_morhua
ENSLBEG00000023388	-	56	96.825	ENSGMOG00000013833	-	56	96.825	Gadus_morhua
ENSLBEG00000023388	-	99	75.084	ENSGMOG00000000629	scrt1b	99	74.074	Gadus_morhua
ENSLBEG00000023388	-	97	61.724	ENSGALG00000028912	SCRT2	97	62.759	Gallus_gallus
ENSLBEG00000023388	-	100	84.512	ENSGAFG00000009650	-	100	84.512	Gambusia_affinis
ENSLBEG00000023388	-	97	61.238	ENSGAFG00000003093	scrt2	97	61.238	Gambusia_affinis
ENSLBEG00000023388	-	99	75.168	ENSGAFG00000007636	scrt1b	99	74.497	Gambusia_affinis
ENSLBEG00000023388	-	100	89.967	ENSGACG00000004072	-	100	89.967	Gasterosteus_aculeatus
ENSLBEG00000023388	-	99	73.311	ENSGACG00000008982	scrt1b	99	71.864	Gasterosteus_aculeatus
ENSLBEG00000023388	-	68	73.558	ENSGAGG00000020760	-	80	73.558	Gopherus_agassizii
ENSLBEG00000023388	-	99	75.593	ENSGAGG00000011736	SCRT1	99	74.915	Gopherus_agassizii
ENSLBEG00000023388	-	96	62.153	ENSGAGG00000020761	SCRT2	96	62.153	Gopherus_agassizii
ENSLBEG00000023388	-	100	92.308	ENSHBUG00000019101	-	100	92.308	Haplochromis_burtoni
ENSLBEG00000023388	-	99	75.503	ENSHBUG00000016621	scrt1b	99	74.832	Haplochromis_burtoni
ENSLBEG00000023388	-	97	61.938	ENSHBUG00000012492	scrt2	96	61.592	Haplochromis_burtoni
ENSLBEG00000023388	-	100	74.426	ENSHCOG00000016179	-	100	74.754	Hippocampus_comes
ENSLBEG00000023388	-	97	59.283	ENSHCOG00000008116	scrt2	97	58.306	Hippocampus_comes
ENSLBEG00000023388	-	99	75.168	ENSHCOG00000016704	scrt1b	99	74.497	Hippocampus_comes
ENSLBEG00000023388	-	99	70.408	ENSIPUG00000005547	-	100	70.068	Ictalurus_punctatus
ENSLBEG00000023388	-	98	77.891	ENSIPUG00000004551	scrt1a	99	77.211	Ictalurus_punctatus
ENSLBEG00000023388	-	97	58.934	ENSKMAG00000018087	scrt2	97	57.053	Kryptolebias_marmoratus
ENSLBEG00000023388	-	99	74.832	ENSKMAG00000005484	scrt1b	99	74.161	Kryptolebias_marmoratus
ENSLBEG00000023388	-	100	91.639	ENSKMAG00000009489	-	100	91.639	Kryptolebias_marmoratus
ENSLBEG00000023388	-	99	74.074	ENSLACG00000003588	SCRT1	99	73.064	Latimeria_chalumnae
ENSLBEG00000023388	-	53	85.987	ENSLOCG00000002246	scrt2	97	52.188	Lepisosteus_oculatus
ENSLBEG00000023388	-	99	76.846	ENSLOCG00000007573	scrt1b	99	76.174	Lepisosteus_oculatus
ENSLBEG00000023388	-	97	59.062	ENSMAMG00000001291	scrt2	97	56.563	Mastacembelus_armatus
ENSLBEG00000023388	-	99	74.411	ENSMAMG00000011698	scrt1b	99	74.832	Mastacembelus_armatus
ENSLBEG00000023388	-	99	75.503	ENSMZEG00005005627	scrt1b	99	74.832	Maylandia_zebra
ENSLBEG00000023388	-	97	61.938	ENSMZEG00005026445	scrt2	96	61.592	Maylandia_zebra
ENSLBEG00000023388	-	100	92.308	ENSMZEG00005026702	-	100	92.308	Maylandia_zebra
ENSLBEG00000023388	-	65	81.347	ENSMGAG00000016579	SCRT2	97	67.470	Meleagris_gallopavo
ENSLBEG00000023388	-	100	92.667	ENSMMOG00000018345	-	100	91.667	Mola_mola
ENSLBEG00000023388	-	97	59.306	ENSMMOG00000009272	scrt2	97	58.675	Mola_mola
ENSLBEG00000023388	-	99	73.490	ENSMMOG00000003327	scrt1b	99	72.819	Mola_mola
ENSLBEG00000023388	-	97	60.201	ENSMALG00000013656	scrt2	96	59.866	Monopterus_albus
ENSLBEG00000023388	-	99	75.084	ENSMALG00000012704	scrt1b	99	75.503	Monopterus_albus
ENSLBEG00000023388	-	100	92.642	ENSNBRG00000014882	-	100	92.642	Neolamprologus_brichardi
ENSLBEG00000023388	-	99	73.401	ENSNBRG00000013983	scrt1b	99	71.192	Neolamprologus_brichardi
ENSLBEG00000023388	-	97	61.592	ENSNBRG00000007221	scrt2	96	61.246	Neolamprologus_brichardi
ENSLBEG00000023388	-	97	59.561	ENSONIG00000016758	scrt2	97	57.053	Oreochromis_niloticus
ENSLBEG00000023388	-	97	88.852	ENSONIG00000019809	-	100	88.852	Oreochromis_niloticus
ENSLBEG00000023388	-	97	56.747	ENSONIG00000003152	-	96	56.401	Oreochromis_niloticus
ENSLBEG00000023388	-	99	75.168	ENSONIG00000006007	scrt1b	99	74.497	Oreochromis_niloticus
ENSLBEG00000023388	-	99	73.737	ENSORLG00000025651	scrt1b	99	73.826	Oryzias_latipes
ENSLBEG00000023388	-	100	87.043	ENSORLG00000022825	-	100	87.043	Oryzias_latipes
ENSLBEG00000023388	-	97	59.561	ENSORLG00000024051	scrt2	97	58.621	Oryzias_latipes
ENSLBEG00000023388	-	99	73.737	ENSORLG00020012967	scrt1b	99	73.826	Oryzias_latipes_hni
ENSLBEG00000023388	-	97	59.561	ENSORLG00020011478	scrt2	97	58.621	Oryzias_latipes_hni
ENSLBEG00000023388	-	99	73.737	ENSORLG00015019165	scrt1b	99	73.826	Oryzias_latipes_hsok
ENSLBEG00000023388	-	97	59.561	ENSORLG00015005524	scrt2	97	58.621	Oryzias_latipes_hsok
ENSLBEG00000023388	-	100	86.711	ENSORLG00015010104	-	100	86.711	Oryzias_latipes_hsok
ENSLBEG00000023388	-	97	59.561	ENSOMEG00000002661	scrt2	97	58.621	Oryzias_melastigma
ENSLBEG00000023388	-	99	73.737	ENSOMEG00000003925	scrt1b	99	73.826	Oryzias_melastigma
ENSLBEG00000023388	-	100	89.899	ENSOMEG00000000286	-	100	89.899	Oryzias_melastigma
ENSLBEG00000023388	-	99	76.431	ENSPKIG00000020085	scrt1a	99	75.758	Paramormyrops_kingsleyae
ENSLBEG00000023388	-	99	76.174	ENSPKIG00000022303	SCRT1	99	75.503	Paramormyrops_kingsleyae
ENSLBEG00000023388	-	97	64.948	ENSPMGG00000016561	scrt2	96	64.948	Periophthalmus_magnuspinnatus
ENSLBEG00000023388	-	99	72.054	ENSPMGG00000002260	scrt1b	99	71.380	Periophthalmus_magnuspinnatus
ENSLBEG00000023388	-	100	90.301	ENSPMGG00000021402	-	100	88.629	Periophthalmus_magnuspinnatus
ENSLBEG00000023388	-	99	75.168	ENSPFOG00000017719	scrt1b	99	74.497	Poecilia_formosa
ENSLBEG00000023388	-	100	92.929	ENSPFOG00000005616	-	100	92.929	Poecilia_formosa
ENSLBEG00000023388	-	97	58.934	ENSPFOG00000007738	scrt2	97	58.934	Poecilia_formosa
ENSLBEG00000023388	-	99	75.168	ENSPLAG00000009876	scrt1b	99	74.497	Poecilia_latipinna
ENSLBEG00000023388	-	100	92.929	ENSPLAG00000011718	-	100	92.929	Poecilia_latipinna
ENSLBEG00000023388	-	97	63.668	ENSPLAG00000005765	scrt2	96	63.668	Poecilia_latipinna
ENSLBEG00000023388	-	99	75.168	ENSPMEG00000013274	scrt1b	99	74.497	Poecilia_mexicana
ENSLBEG00000023388	-	97	63.668	ENSPMEG00000001538	scrt2	96	63.668	Poecilia_mexicana
ENSLBEG00000023388	-	100	92.929	ENSPMEG00000011706	-	100	92.929	Poecilia_mexicana
ENSLBEG00000023388	-	100	92.593	ENSPREG00000012166	-	100	92.593	Poecilia_reticulata
ENSLBEG00000023388	-	97	58.934	ENSPREG00000001147	scrt2	97	58.934	Poecilia_reticulata
ENSLBEG00000023388	-	99	75.168	ENSPREG00000018985	scrt1b	99	74.497	Poecilia_reticulata
ENSLBEG00000023388	-	99	75.503	ENSPNYG00000017733	scrt1b	99	74.832	Pundamilia_nyererei
ENSLBEG00000023388	-	97	61.938	ENSPNYG00000013109	scrt2	96	61.592	Pundamilia_nyererei
ENSLBEG00000023388	-	100	91.973	ENSPNYG00000008865	-	100	91.973	Pundamilia_nyererei
ENSLBEG00000023388	-	99	73.737	ENSPNAG00000027880	-	100	72.727	Pygocentrus_nattereri
ENSLBEG00000023388	-	99	77.365	ENSPNAG00000017415	scrt1a	99	76.689	Pygocentrus_nattereri
ENSLBEG00000023388	-	99	75.421	ENSSFOG00015001195	SCRT1	98	75.170	Scleropages_formosus
ENSLBEG00000023388	-	100	75.920	ENSSMAG00000019207	scrt1b	100	75.251	Scophthalmus_maximus
ENSLBEG00000023388	-	100	90.759	ENSSMAG00000005122	-	100	90.759	Scophthalmus_maximus
ENSLBEG00000023388	-	99	75.839	ENSSDUG00000007752	scrt1b	99	75.168	Seriola_dumerili
ENSLBEG00000023388	-	98	59.810	ENSSDUG00000001637	scrt2	96	57.595	Seriola_dumerili
ENSLBEG00000023388	-	100	92.642	ENSSDUG00000013215	-	100	92.642	Seriola_dumerili
ENSLBEG00000023388	-	100	92.642	ENSSLDG00000016454	-	100	92.642	Seriola_lalandi_dorsalis
ENSLBEG00000023388	-	99	75.839	ENSSLDG00000017166	scrt1b	99	75.168	Seriola_lalandi_dorsalis
ENSLBEG00000023388	-	97	59.062	ENSSLDG00000013565	scrt2	97	56.875	Seriola_lalandi_dorsalis
ENSLBEG00000023388	-	97	64.583	ENSSPUG00000018637	SCRT2	97	64.236	Sphenodon_punctatus
ENSLBEG00000023388	-	100	93.645	ENSSPAG00000006788	-	100	93.645	Stegastes_partitus
ENSLBEG00000023388	-	97	62.284	ENSSPAG00000014018	scrt2	96	61.938	Stegastes_partitus
ENSLBEG00000023388	-	99	75.839	ENSSPAG00000002200	scrt1b	99	75.168	Stegastes_partitus
ENSLBEG00000023388	-	67	78.894	ENSTGUG00000006801	SCRT2	99	67.871	Taeniopygia_guttata
ENSLBEG00000023388	-	99	75.084	ENSTRUG00000011637	scrt1b	100	74.074	Takifugu_rubripes
ENSLBEG00000023388	-	97	60.323	ENSTRUG00000007620	scrt2	97	59.032	Takifugu_rubripes
ENSLBEG00000023388	-	100	92.308	ENSTRUG00000012719	-	100	91.304	Takifugu_rubripes
ENSLBEG00000023388	-	87	84.109	ENSTRUG00000019558	-	82	82.946	Takifugu_rubripes
ENSLBEG00000023388	-	97	63.699	ENSTNIG00000012473	scrt2	97	63.699	Tetraodon_nigroviridis
ENSLBEG00000023388	-	99	74.161	ENSTNIG00000018384	scrt1b	99	73.490	Tetraodon_nigroviridis
ENSLBEG00000023388	-	100	83.838	ENSXCOG00000019861	-	100	83.838	Xiphophorus_couchianus
ENSLBEG00000023388	-	97	61.364	ENSXCOG00000014367	scrt2	97	61.364	Xiphophorus_couchianus
ENSLBEG00000023388	-	99	74.832	ENSXCOG00000019675	scrt1b	99	74.161	Xiphophorus_couchianus
ENSLBEG00000023388	-	97	59.062	ENSXMAG00000028567	scrt2	97	59.062	Xiphophorus_maculatus
ENSLBEG00000023388	-	100	92.929	ENSXMAG00000015353	-	100	92.929	Xiphophorus_maculatus
ENSLBEG00000023388	-	99	74.832	ENSXMAG00000027885	scrt1b	99	74.161	Xiphophorus_maculatus