EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000023617 (Gene tree)
Gene ID: 110001300
Gene Symbol: patl1
Alias: fa11d04|wu:fa11d04|zgc:158239
Full Name: PAT1 homolog 1%2C processing body mRNA decay factor
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 17113 bases
Position: chrFKLU01000787.1:76747-93859
Accession: 110001300
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000031308	PAT1	PF09770.9	3.9e-13	1	1
ENSLBEP00000031287	PAT1	PF09770.9	5.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000032733	-	3130	-	ENSLBEP00000031308	837 (aa)	-	-
ENSLBET00000032712	-	3375	XM_020656767	ENSLBEP00000031287	830 (aa)	XP_020512423	UPI0009B329E8

Gene Model

Click here to download ENSLBEG00000023617's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000023617's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000023617	patl1	51	36.261	ENSG00000229474	PATL2	99	37.741	Homo_sapiens
ENSLBEG00000023617	patl1	81	58.025	ENSG00000166889	PATL1	92	68.333	Homo_sapiens
ENSLBEG00000023617	patl1	82	92.926	ENSAPOG00000021290	patl1	99	97.222	Acanthochromis_polyacanthus
ENSLBEG00000023617	patl1	81	58.025	ENSAMEG00000014215	PATL1	91	71.154	Ailuropoda_melanoleuca
ENSLBEG00000023617	patl1	99	80.532	ENSACIG00000005182	patl1	99	80.532	Amphilophus_citrinellus
ENSLBEG00000023617	patl1	94	83.822	ENSAOCG00000021993	patl1	95	83.777	Amphiprion_ocellaris
ENSLBEG00000023617	patl1	56	34.362	ENSAOCG00000023738	patl2	51	35.443	Amphiprion_ocellaris
ENSLBEG00000023617	patl1	56	33.676	ENSAPEG00000011299	patl2	61	34.937	Amphiprion_percula
ENSLBEG00000023617	patl1	100	88.067	ENSAPEG00000021391	patl1	100	88.783	Amphiprion_percula
ENSLBEG00000023617	patl1	100	88.327	ENSATEG00000002230	patl1	100	87.966	Anabas_testudineus
ENSLBEG00000023617	patl1	51	48.180	ENSAPLG00000013394	PATL1	93	47.527	Anas_platyrhynchos
ENSLBEG00000023617	patl1	58	36.346	ENSAPLG00000003980	PATL2	65	39.454	Anas_platyrhynchos
ENSLBEG00000023617	patl1	78	56.250	ENSACAG00000006607	PATL1	89	64.407	Anolis_carolinensis
ENSLBEG00000023617	patl1	51	36.629	ENSANAG00000022701	PATL2	74	37.108	Aotus_nancymaae
ENSLBEG00000023617	patl1	81	58.025	ENSANAG00000023078	PATL1	92	68.333	Aotus_nancymaae
ENSLBEG00000023617	patl1	100	87.665	ENSACLG00000005144	patl1	100	88.278	Astatotilapia_calliptera
ENSLBEG00000023617	patl1	95	87.688	ENSAMXG00000010731	patl1	100	75.418	Astyanax_mexicanus
ENSLBEG00000023617	patl1	52	36.681	ENSAMXG00000020293	patl2	58	36.364	Astyanax_mexicanus
ENSLBEG00000023617	patl1	79	68.333	ENSBTAG00000005913	PATL1	92	68.333	Bos_taurus
ENSLBEG00000023617	patl1	51	35.857	ENSCJAG00000002379	PATL2	77	36.322	Callithrix_jacchus
ENSLBEG00000023617	patl1	81	56.790	ENSCJAG00000016192	PATL1	92	68.333	Callithrix_jacchus
ENSLBEG00000023617	patl1	81	58.025	ENSCAFG00000007581	PATL1	92	68.333	Canis_familiaris
ENSLBEG00000023617	patl1	81	58.025	ENSCAFG00020001648	PATL1	92	68.333	Canis_lupus_dingo
ENSLBEG00000023617	patl1	52	37.472	ENSCHIG00000026665	PATL2	76	37.981	Capra_hircus
ENSLBEG00000023617	patl1	79	68.333	ENSCHIG00000025913	PATL1	92	68.333	Capra_hircus
ENSLBEG00000023617	patl1	80	68.333	ENSTSYG00000012748	PATL1	89	68.333	Carlito_syrichta
ENSLBEG00000023617	patl1	51	35.973	ENSTSYG00000032456	PATL2	74	36.675	Carlito_syrichta
ENSLBEG00000023617	patl1	81	58.537	ENSCAPG00000013668	PATL1	90	71.154	Cavia_aperea
ENSLBEG00000023617	patl1	81	58.537	ENSCPOG00000006827	PATL1	92	70.000	Cavia_porcellus
ENSLBEG00000023617	patl1	81	58.025	ENSCCAG00000023759	PATL1	92	68.333	Cebus_capucinus
ENSLBEG00000023617	patl1	51	36.486	ENSCATG00000034794	PATL2	99	37.741	Cercocebus_atys
ENSLBEG00000023617	patl1	81	58.025	ENSCATG00000009629	PATL1	92	68.333	Cercocebus_atys
ENSLBEG00000023617	patl1	80	60.274	ENSCLAG00000003427	PATL1	91	71.154	Chinchilla_lanigera
ENSLBEG00000023617	patl1	72	49.924	ENSCSAG00000006095	PATL1	93	50.229	Chlorocebus_sabaeus
ENSLBEG00000023617	patl1	60	58.000	ENSCHOG00000001611	PATL1	83	58.000	Choloepus_hoffmanni
ENSLBEG00000023617	patl1	51	38.326	ENSCPBG00000006150	PATL2	62	38.663	Chrysemys_picta_bellii
ENSLBEG00000023617	patl1	56	51.282	ENSCING00000021535	-	83	51.282	Ciona_intestinalis
ENSLBEG00000023617	patl1	51	36.281	ENSCANG00000013856	PATL2	74	36.983	Colobus_angolensis_palliatus
ENSLBEG00000023617	patl1	81	57.500	ENSCANG00000039197	PATL1	91	69.231	Colobus_angolensis_palliatus
ENSLBEG00000023617	patl1	81	58.025	ENSCGRG00001024927	Patl1	91	68.333	Cricetulus_griseus_chok1gshd
ENSLBEG00000023617	patl1	78	69.231	ENSCGRG00000000461	Patl1	91	69.231	Cricetulus_griseus_crigri
ENSLBEG00000023617	patl1	100	83.393	ENSCSEG00000008261	patl1	100	85.012	Cynoglossus_semilaevis
ENSLBEG00000023617	patl1	93	84.256	ENSCVAG00000006664	patl1	100	81.282	Cyprinodon_variegatus
ENSLBEG00000023617	patl1	100	71.703	ENSDARG00000017423	patl1	100	71.531	Danio_rerio
ENSLBEG00000023617	patl1	68	67.308	ENSDNOG00000038865	PATL1	99	48.991	Dasypus_novemcinctus
ENSLBEG00000023617	patl1	81	59.259	ENSDORG00000000237	Patl1	92	70.000	Dipodomys_ordii
ENSLBEG00000023617	patl1	51	34.703	ENSEASG00005017984	PATL2	72	35.149	Equus_asinus_asinus
ENSLBEG00000023617	patl1	79	68.333	ENSEASG00005007963	PATL1	92	68.333	Equus_asinus_asinus
ENSLBEG00000023617	patl1	51	35.227	ENSECAG00000013462	PATL2	73	35.961	Equus_caballus
ENSLBEG00000023617	patl1	79	68.333	ENSECAG00000011411	PATL1	92	68.333	Equus_caballus
ENSLBEG00000023617	patl1	100	73.603	ENSELUG00000024249	patl1	100	74.703	Esox_lucius
ENSLBEG00000023617	patl1	52	36.219	ENSELUG00000023244	patl2	54	36.869	Esox_lucius
ENSLBEG00000023617	patl1	79	68.333	ENSFCAG00000015573	PATL1	92	68.333	Felis_catus
ENSLBEG00000023617	patl1	51	36.364	ENSFCAG00000027170	PATL2	76	36.804	Felis_catus
ENSLBEG00000023617	patl1	58	35.156	ENSFALG00000009768	PATL2	57	37.170	Ficedula_albicollis
ENSLBEG00000023617	patl1	91	51.593	ENSFALG00000012150	PATL1	91	66.071	Ficedula_albicollis
ENSLBEG00000023617	patl1	80	58.904	ENSFDAG00000016128	PATL1	91	69.231	Fukomys_damarensis
ENSLBEG00000023617	patl1	99	82.126	ENSFHEG00000017790	patl1	100	80.576	Fundulus_heteroclitus
ENSLBEG00000023617	patl1	50	35.000	ENSGMOG00000005666	patl2	100	36.029	Gadus_morhua
ENSLBEG00000023617	patl1	80	68.333	ENSGALG00000042641	PATL1	94	68.333	Gallus_gallus
ENSLBEG00000023617	patl1	54	36.786	ENSGALG00000002167	PATL2	52	38.242	Gallus_gallus
ENSLBEG00000023617	patl1	100	82.671	ENSGAFG00000006508	patl1	100	81.348	Gambusia_affinis
ENSLBEG00000023617	patl1	81	93.103	ENSGACG00000016448	patl1	99	75.818	Gasterosteus_aculeatus
ENSLBEG00000023617	patl1	91	50.377	ENSGAGG00000004461	PATL1	92	68.333	Gopherus_agassizii
ENSLBEG00000023617	patl1	81	58.025	ENSGGOG00000004335	PATL1	92	68.333	Gorilla_gorilla
ENSLBEG00000023617	patl1	51	36.261	ENSGGOG00000025923	PATL2	74	36.957	Gorilla_gorilla
ENSLBEG00000023617	patl1	100	87.665	ENSHBUG00000005365	patl1	100	88.278	Haplochromis_burtoni
ENSLBEG00000023617	patl1	81	60.494	ENSHGLG00000018173	PATL1	92	70.000	Heterocephalus_glaber_female
ENSLBEG00000023617	patl1	78	60.345	ENSHGLG00100003453	PATL1	93	61.404	Heterocephalus_glaber_male
ENSLBEG00000023617	patl1	100	82.156	ENSHCOG00000001898	patl1	100	81.916	Hippocampus_comes
ENSLBEG00000023617	patl1	51	37.443	ENSIPUG00000020692	patl2	56	38.060	Ictalurus_punctatus
ENSLBEG00000023617	patl1	80	57.143	ENSSTOG00000013764	PATL1	91	69.388	Ictidomys_tridecemlineatus
ENSLBEG00000023617	patl1	51	36.180	ENSSTOG00000033848	PATL2	75	36.754	Ictidomys_tridecemlineatus
ENSLBEG00000023617	patl1	80	58.904	ENSJJAG00000010135	Patl1	91	71.154	Jaculus_jaculus
ENSLBEG00000023617	patl1	50	34.426	ENSKMAG00000021275	patl2	55	34.804	Kryptolebias_marmoratus
ENSLBEG00000023617	patl1	100	86.364	ENSKMAG00000020848	patl1	100	84.928	Kryptolebias_marmoratus
ENSLBEG00000023617	patl1	77	55.882	ENSLACG00000004640	PATL1	92	55.882	Latimeria_chalumnae
ENSLBEG00000023617	patl1	92	69.892	ENSLOCG00000000717	patl1	100	63.626	Lepisosteus_oculatus
ENSLBEG00000023617	patl1	81	58.025	ENSLAFG00000015161	PATL1	92	68.333	Loxodonta_africana
ENSLBEG00000023617	patl1	81	58.025	ENSMFAG00000040851	PATL1	92	68.333	Macaca_fascicularis
ENSLBEG00000023617	patl1	81	58.025	ENSMMUG00000017287	PATL1	92	68.333	Macaca_mulatta
ENSLBEG00000023617	patl1	51	36.486	ENSMNEG00000034510	PATL2	75	37.198	Macaca_nemestrina
ENSLBEG00000023617	patl1	81	58.025	ENSMNEG00000038692	PATL1	92	68.333	Macaca_nemestrina
ENSLBEG00000023617	patl1	81	58.025	ENSMLEG00000030044	PATL1	92	68.333	Mandrillus_leucophaeus
ENSLBEG00000023617	patl1	100	88.956	ENSMAMG00000003950	patl1	100	88.475	Mastacembelus_armatus
ENSLBEG00000023617	patl1	100	87.665	ENSMZEG00005013404	patl1	100	88.278	Maylandia_zebra
ENSLBEG00000023617	patl1	72	69.643	ENSMGAG00000003406	PATL1	91	69.643	Meleagris_gallopavo
ENSLBEG00000023617	patl1	51	37.723	ENSMGAG00000001309	PATL2	67	38.810	Meleagris_gallopavo
ENSLBEG00000023617	patl1	72	44.582	ENSMAUG00000012059	Patl1	85	44.828	Mesocricetus_auratus
ENSLBEG00000023617	patl1	56	33.951	ENSMAUG00000001008	Patl2	77	36.098	Mesocricetus_auratus
ENSLBEG00000023617	patl1	81	58.025	ENSMICG00000004172	PATL1	89	68.333	Microcebus_murinus
ENSLBEG00000023617	patl1	79	68.333	ENSMOCG00000010087	Patl1	91	68.333	Microtus_ochrogaster
ENSLBEG00000023617	patl1	81	85.366	ENSMMOG00000013711	patl1	99	85.391	Mola_mola
ENSLBEG00000023617	patl1	51	36.484	ENSMODG00000017690	PATL2	75	36.842	Monodelphis_domestica
ENSLBEG00000023617	patl1	81	60.000	ENSMODG00000020201	PATL1	92	68.333	Monodelphis_domestica
ENSLBEG00000023617	patl1	95	83.923	ENSMALG00000018706	patl1	100	78.074	Monopterus_albus
ENSLBEG00000023617	patl1	81	59.259	MGP_CAROLIEiJ_G0022739	Patl1	92	68.333	Mus_caroli
ENSLBEG00000023617	patl1	81	59.259	ENSMUSG00000046139	Patl1	92	68.333	Mus_musculus
ENSLBEG00000023617	patl1	81	59.259	MGP_PahariEiJ_G0014233	Patl1	92	68.333	Mus_pahari
ENSLBEG00000023617	patl1	81	59.259	MGP_SPRETEiJ_G0023652	Patl1	92	68.333	Mus_spretus
ENSLBEG00000023617	patl1	81	58.025	ENSMPUG00000014607	PATL1	92	68.333	Mustela_putorius_furo
ENSLBEG00000023617	patl1	79	68.333	ENSMLUG00000011169	PATL1	91	68.333	Myotis_lucifugus
ENSLBEG00000023617	patl1	79	68.333	ENSNGAG00000003682	Patl1	91	68.333	Nannospalax_galili
ENSLBEG00000023617	patl1	70	82.234	ENSNBRG00000015372	patl1	93	54.826	Neolamprologus_brichardi
ENSLBEG00000023617	patl1	81	58.025	ENSNLEG00000013081	PATL1	92	68.333	Nomascus_leucogenys
ENSLBEG00000023617	patl1	51	36.261	ENSNLEG00000005673	PATL2	75	36.957	Nomascus_leucogenys
ENSLBEG00000023617	patl1	57	56.410	ENSMEUG00000009391	PATL1	73	56.410	Notamacropus_eugenii
ENSLBEG00000023617	patl1	61	53.769	ENSOPRG00000007963	PATL1	78	53.769	Ochotona_princeps
ENSLBEG00000023617	patl1	50	46.009	ENSODEG00000001792	PATL1	70	52.174	Octodon_degus
ENSLBEG00000023617	patl1	100	86.946	ENSONIG00000004170	patl1	100	88.024	Oreochromis_niloticus
ENSLBEG00000023617	patl1	52	35.394	ENSOCUG00000006339	PATL2	77	36.765	Oryctolagus_cuniculus
ENSLBEG00000023617	patl1	79	68.333	ENSOCUG00000002156	PATL1	92	68.333	Oryctolagus_cuniculus
ENSLBEG00000023617	patl1	81	58.025	ENSOGAG00000004351	PATL1	92	68.333	Otolemur_garnettii
ENSLBEG00000023617	patl1	50	36.301	ENSOARG00000003762	PATL2	74	36.700	Ovis_aries
ENSLBEG00000023617	patl1	78	69.231	ENSOARG00000012005	PATL1	88	69.231	Ovis_aries
ENSLBEG00000023617	patl1	81	58.025	ENSPPAG00000034275	PATL1	92	68.333	Pan_paniscus
ENSLBEG00000023617	patl1	51	36.261	ENSPPAG00000007221	PATL2	74	36.957	Pan_paniscus
ENSLBEG00000023617	patl1	51	35.828	ENSPPRG00000004279	PATL2	74	36.609	Panthera_pardus
ENSLBEG00000023617	patl1	78	69.231	ENSPPRG00000020639	PATL1	91	69.231	Panthera_pardus
ENSLBEG00000023617	patl1	51	35.601	ENSPTIG00000018964	PATL2	75	36.364	Panthera_tigris_altaica
ENSLBEG00000023617	patl1	79	68.333	ENSPTIG00000019298	PATL1	92	68.333	Panthera_tigris_altaica
ENSLBEG00000023617	patl1	51	36.261	ENSPTRG00000041536	PATL2	74	36.957	Pan_troglodytes
ENSLBEG00000023617	patl1	81	58.025	ENSPTRG00000003697	PATL1	92	68.333	Pan_troglodytes
ENSLBEG00000023617	patl1	51	36.486	ENSPANG00000018026	PATL2	75	37.198	Papio_anubis
ENSLBEG00000023617	patl1	81	58.025	ENSPANG00000035620	PATL1	92	68.333	Papio_anubis
ENSLBEG00000023617	patl1	100	71.669	ENSPKIG00000016224	patl1	100	71.976	Paramormyrops_kingsleyae
ENSLBEG00000023617	patl1	82	66.667	ENSPSIG00000016206	PATL1	90	66.667	Pelodiscus_sinensis
ENSLBEG00000023617	patl1	100	79.447	ENSPMGG00000002644	patl1	100	79.928	Periophthalmus_magnuspinnatus
ENSLBEG00000023617	patl1	79	68.333	ENSPEMG00000014215	Patl1	91	68.333	Peromyscus_maniculatus_bairdii
ENSLBEG00000023617	patl1	52	35.637	ENSPEMG00000016509	Patl2	72	37.179	Peromyscus_maniculatus_bairdii
ENSLBEG00000023617	patl1	81	60.000	ENSPCIG00000010852	PATL1	92	68.333	Phascolarctos_cinereus
ENSLBEG00000023617	patl1	100	80.649	ENSPFOG00000007768	patl1	100	80.577	Poecilia_formosa
ENSLBEG00000023617	patl1	100	82.812	ENSPLAG00000018465	patl1	100	81.588	Poecilia_latipinna
ENSLBEG00000023617	patl1	100	82.792	ENSPMEG00000006555	patl1	100	81.227	Poecilia_mexicana
ENSLBEG00000023617	patl1	90	79.759	ENSPREG00000003874	patl1	95	77.261	Poecilia_reticulata
ENSLBEG00000023617	patl1	81	58.025	ENSPPYG00000003230	PATL1	92	68.333	Pongo_abelii
ENSLBEG00000023617	patl1	81	58.025	ENSPCOG00000020770	PATL1	92	68.333	Propithecus_coquereli
ENSLBEG00000023617	patl1	72	48.536	ENSPVAG00000015239	PATL1	99	47.933	Pteropus_vampyrus
ENSLBEG00000023617	patl1	86	95.963	ENSPNYG00000018936	patl1	100	95.679	Pundamilia_nyererei
ENSLBEG00000023617	patl1	53	36.303	ENSPNAG00000002315	patl2	57	37.905	Pygocentrus_nattereri
ENSLBEG00000023617	patl1	100	74.670	ENSPNAG00000017907	patl1	100	75.388	Pygocentrus_nattereri
ENSLBEG00000023617	patl1	81	59.259	ENSRNOG00000021052	Patl1	92	68.333	Rattus_norvegicus
ENSLBEG00000023617	patl1	81	58.025	ENSRBIG00000032263	PATL1	92	68.333	Rhinopithecus_bieti
ENSLBEG00000023617	patl1	81	58.025	ENSRROG00000032861	PATL1	92	68.333	Rhinopithecus_roxellana
ENSLBEG00000023617	patl1	81	58.025	ENSSBOG00000025195	PATL1	92	68.333	Saimiri_boliviensis_boliviensis
ENSLBEG00000023617	patl1	81	58.750	ENSSHAG00000004309	PATL1	92	68.333	Sarcophilus_harrisii
ENSLBEG00000023617	patl1	100	72.443	ENSSFOG00015009614	patl1	100	72.792	Scleropages_formosus
ENSLBEG00000023617	patl1	64	32.000	ENSSMAG00000017262	patl2	65	35.366	Scophthalmus_maximus
ENSLBEG00000023617	patl1	100	88.862	ENSSMAG00000009482	patl1	100	89.581	Scophthalmus_maximus
ENSLBEG00000023617	patl1	100	88.942	ENSSDUG00000005362	patl1	100	88.823	Seriola_dumerili
ENSLBEG00000023617	patl1	100	88.571	ENSSLDG00000019146	patl1	100	88.452	Seriola_lalandi_dorsalis
ENSLBEG00000023617	patl1	57	51.238	ENSSARG00000009600	PATL1	68	51.238	Sorex_araneus
ENSLBEG00000023617	patl1	76	68.333	ENSSPUG00000009453	PATL1	89	68.333	Sphenodon_punctatus
ENSLBEG00000023617	patl1	99	79.952	ENSSPAG00000003187	patl1	99	81.862	Stegastes_partitus
ENSLBEG00000023617	patl1	79	68.333	ENSSSCG00000013124	PATL1	92	68.333	Sus_scrofa
ENSLBEG00000023617	patl1	72	51.584	ENSTGUG00000006222	PATL1	92	66.071	Taeniopygia_guttata
ENSLBEG00000023617	patl1	100	73.861	ENSTRUG00000000709	patl1	100	72.608	Takifugu_rubripes
ENSLBEG00000023617	patl1	69	63.462	ENSTBEG00000000796	PATL1	82	63.462	Tupaia_belangeri
ENSLBEG00000023617	patl1	63	54.427	ENSTTRG00000009389	PATL1	82	53.846	Tursiops_truncatus
ENSLBEG00000023617	patl1	79	63.793	ENSUMAG00000018634	PATL1	91	80.556	Ursus_maritimus
ENSLBEG00000023617	patl1	81	56.790	ENSVVUG00000016668	PATL1	90	69.231	Vulpes_vulpes
ENSLBEG00000023617	patl1	68	86.441	ENSXCOG00000010808	patl1	99	87.273	Xiphophorus_couchianus
ENSLBEG00000023617	patl1	100	82.190	ENSXMAG00000013834	patl1	100	81.348	Xiphophorus_maculatus