EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000023823 (Gene tree)
Gene ID: -
Gene Symbol: zgc:171482
Alias: -
Full Name: zinc finger matrin-type protein 4-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 14094 bases
Position: chrFKLU01000381.1:13631-27724
Accession: 109996725
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000031554	zf-met	PF12874.7	9.2e-15	1	2
ENSLBEP00000031554	zf-met	PF12874.7	9.2e-15	2	2
ENSLBEP00000031554	zf-C2H2_jaz	PF12171.8	3.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000032980	-	423	XM_020650993	ENSLBEP00000031554	140 (aa)	XP_020506649	-

Gene Model

Click here to download ENSLBEG00000023823's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000023823's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000023823	zgc:171482	92	93.023	ENSAPOG00000019970	zgc:171482	79	93.023	Acanthochromis_polyacanthus
ENSLBEG00000023823	zgc:171482	86	96.667	ENSACIG00000021512	zgc:171482	90	96.667	Amphilophus_citrinellus
ENSLBEG00000023823	zgc:171482	89	95.161	ENSAOCG00000000751	zgc:171482	91	95.161	Amphiprion_ocellaris
ENSLBEG00000023823	zgc:171482	96	89.552	ENSAPEG00000014154	zgc:171482	96	89.552	Amphiprion_percula
ENSLBEG00000023823	zgc:171482	90	97.391	ENSATEG00000001371	zgc:171482	79	94.215	Anabas_testudineus
ENSLBEG00000023823	zgc:171482	92	91.473	ENSACLG00000010511	zgc:171482	90	91.473	Astatotilapia_calliptera
ENSLBEG00000023823	zgc:171482	86	88.618	ENSAMXG00000002299	zgc:171482	93	88.618	Astyanax_mexicanus
ENSLBEG00000023823	zgc:171482	86	95.833	ENSCSEG00000006509	zgc:171482	78	95.833	Cynoglossus_semilaevis
ENSLBEG00000023823	zgc:171482	86	96.694	ENSCVAG00000013606	zgc:171482	80	96.694	Cyprinodon_variegatus
ENSLBEG00000023823	zgc:171482	96	82.963	ENSDARG00000074415	zgc:171482	100	82.963	Danio_rerio
ENSLBEG00000023823	zgc:171482	94	87.023	ENSELUG00000021817	zgc:171482	94	87.023	Esox_lucius
ENSLBEG00000023823	zgc:171482	85	70.000	ENSELUG00000017517	-	60	84.270	Esox_lucius
ENSLBEG00000023823	zgc:171482	92	93.798	ENSFHEG00000002233	zgc:171482	92	93.798	Fundulus_heteroclitus
ENSLBEG00000023823	zgc:171482	89	92.800	ENSGMOG00000010508	zgc:171482	79	92.800	Gadus_morhua
ENSLBEG00000023823	zgc:171482	86	97.500	ENSGAFG00000009398	zgc:171482	78	97.500	Gambusia_affinis
ENSLBEG00000023823	zgc:171482	97	88.235	ENSGACG00000007680	zgc:171482	80	88.235	Gasterosteus_aculeatus
ENSLBEG00000023823	zgc:171482	92	91.473	ENSHBUG00000023289	zgc:171482	97	91.473	Haplochromis_burtoni
ENSLBEG00000023823	zgc:171482	89	88.889	ENSHCOG00000018086	zgc:171482	94	88.889	Hippocampus_comes
ENSLBEG00000023823	zgc:171482	92	87.597	ENSIPUG00000000361	zgc:171482	93	87.597	Ictalurus_punctatus
ENSLBEG00000023823	zgc:171482	91	92.913	ENSKMAG00000005077	zgc:171482	68	92.913	Kryptolebias_marmoratus
ENSLBEG00000023823	zgc:171482	86	90.909	ENSLOCG00000008863	zgc:171482	77	90.909	Lepisosteus_oculatus
ENSLBEG00000023823	zgc:171482	96	91.791	ENSMAMG00000001031	zgc:171482	84	91.791	Mastacembelus_armatus
ENSLBEG00000023823	zgc:171482	86	89.167	ENSMZEG00005027721	zgc:171482	79	89.167	Maylandia_zebra
ENSLBEG00000023823	zgc:171482	92	94.574	ENSMMOG00000010523	zgc:171482	98	94.574	Mola_mola
ENSLBEG00000023823	zgc:171482	86	95.868	ENSMALG00000017883	zgc:171482	80	95.868	Monopterus_albus
ENSLBEG00000023823	zgc:171482	100	82.857	ENSNBRG00000021035	zgc:171482	96	82.857	Neolamprologus_brichardi
ENSLBEG00000023823	zgc:171482	90	92.857	ENSONIG00000018365	zgc:171482	78	92.857	Oreochromis_niloticus
ENSLBEG00000023823	zgc:171482	90	99.130	ENSORLG00000007607	zgc:171482	86	99.130	Oryzias_latipes
ENSLBEG00000023823	zgc:171482	97	88.235	ENSORLG00020003563	zgc:171482	96	88.235	Oryzias_latipes_hni
ENSLBEG00000023823	zgc:171482	90	99.130	ENSORLG00015008552	zgc:171482	86	99.130	Oryzias_latipes_hsok
ENSLBEG00000023823	zgc:171482	97	90.441	ENSOMEG00000003526	zgc:171482	96	90.441	Oryzias_melastigma
ENSLBEG00000023823	zgc:171482	79	90.000	ENSPKIG00000016244	zgc:171482	82	87.826	Paramormyrops_kingsleyae
ENSLBEG00000023823	zgc:171482	83	94.828	ENSPKIG00000015911	-	81	94.828	Paramormyrops_kingsleyae
ENSLBEG00000023823	zgc:171482	91	92.126	ENSPMGG00000020230	zgc:171482	82	92.126	Periophthalmus_magnuspinnatus
ENSLBEG00000023823	zgc:171482	89	96.800	ENSPFOG00000001974	zgc:171482	78	95.276	Poecilia_formosa
ENSLBEG00000023823	zgc:171482	89	96.800	ENSPLAG00000003327	zgc:171482	79	96.800	Poecilia_latipinna
ENSLBEG00000023823	zgc:171482	90	96.825	ENSPMEG00000004988	zgc:171482	76	96.825	Poecilia_mexicana
ENSLBEG00000023823	zgc:171482	93	94.615	ENSPREG00000019241	zgc:171482	94	94.615	Poecilia_reticulata
ENSLBEG00000023823	zgc:171482	92	91.473	ENSPNYG00000007773	zgc:171482	90	91.473	Pundamilia_nyererei
ENSLBEG00000023823	zgc:171482	82	93.043	ENSPNAG00000007619	zgc:171482	79	88.000	Pygocentrus_nattereri
ENSLBEG00000023823	zgc:171482	84	87.179	ENSSFOG00015016149	zgc:171482	94	87.179	Scleropages_formosus
ENSLBEG00000023823	zgc:171482	83	89.655	ENSSFOG00015021238	zgc:171482	78	89.655	Scleropages_formosus
ENSLBEG00000023823	zgc:171482	93	93.846	ENSSMAG00000002715	zgc:171482	83	93.846	Scophthalmus_maximus
ENSLBEG00000023823	zgc:171482	100	90.714	ENSSDUG00000008773	zgc:171482	97	90.714	Seriola_dumerili
ENSLBEG00000023823	zgc:171482	94	94.697	ENSSLDG00000019510	zgc:171482	93	94.697	Seriola_lalandi_dorsalis
ENSLBEG00000023823	zgc:171482	89	96.774	ENSSPAG00000013724	zgc:171482	98	96.774	Stegastes_partitus
ENSLBEG00000023823	zgc:171482	92	89.147	ENSTRUG00000005705	zgc:171482	76	89.147	Takifugu_rubripes
ENSLBEG00000023823	zgc:171482	90	72.093	ENSTNIG00000008679	zgc:171482	86	72.093	Tetraodon_nigroviridis
ENSLBEG00000023823	zgc:171482	79	77.586	ENSXETG00000013525	zmat4	76	77.586	Xenopus_tropicalis
ENSLBEG00000023823	zgc:171482	86	87.603	ENSXMAG00000002641	zgc:171482	78	87.603	Xiphophorus_maculatus