EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000023845 (Gene tree)
Gene ID: 109983063
Gene Symbol: chd1l
Alias: zgc:56084
Full Name: chromodomain helicase DNA binding protein 1 like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 14583 bases
Position: chrFKLU01000003.1:1014776-1029358
Accession: 109983063
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000031638	ResIII	PF04851.15	7.9e-10	1	1
ENSLBEP00000031688	ResIII	PF04851.15	7.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000033064	-	3230	XM_020632581	ENSLBEP00000031638	1028 (aa)	XP_020488237	UPI0009B4A15B
ENSLBET00000033114	-	2544	-	ENSLBEP00000031688	847 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000023845's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000023845's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000023845	chd1l	50	31.388	ENSLBEG00000000091	ercc6l	52	31.879
ENSLBEG00000023845	chd1l	62	42.857	ENSLBEG00000013295	SMARCA1	62	41.968
ENSLBEG00000023845	chd1l	62	42.857	ENSLBEG00000018112	smarca5	52	42.518
ENSLBEG00000023845	chd1l	50	30.898	ENSLBEG00000014617	rad54l	72	31.496
ENSLBEG00000023845	chd1l	55	45.528	ENSLBEG00000027807	hells	63	45.528
ENSLBEG00000023845	chd1l	51	39.540	ENSLBEG00000009390	-	92	39.344

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000023845	chd1l	96	63.758	ENSG00000131778	CHD1L	99	64.239	Homo_sapiens
ENSLBEG00000023845	chd1l	97	84.311	ENSAPOG00000001539	chd1l	99	85.155	Acanthochromis_polyacanthus
ENSLBEG00000023845	chd1l	96	64.485	ENSAMEG00000017063	CHD1L	97	63.895	Ailuropoda_melanoleuca
ENSLBEG00000023845	chd1l	96	81.807	ENSACIG00000001164	chd1l	99	81.600	Amphilophus_citrinellus
ENSLBEG00000023845	chd1l	100	82.588	ENSAOCG00000014510	chd1l	100	82.782	Amphiprion_ocellaris
ENSLBEG00000023845	chd1l	99	79.811	ENSAPEG00000017573	chd1l	96	81.943	Amphiprion_percula
ENSLBEG00000023845	chd1l	96	81.774	ENSAPEG00000017450	chd1l	99	80.066	Amphiprion_percula
ENSLBEG00000023845	chd1l	100	83.463	ENSATEG00000013058	chd1l	100	83.463	Anabas_testudineus
ENSLBEG00000023845	chd1l	96	62.591	ENSAPLG00000009976	CHD1L	96	62.125	Anas_platyrhynchos
ENSLBEG00000023845	chd1l	96	60.402	ENSACAG00000017686	CHD1L	98	60.201	Anolis_carolinensis
ENSLBEG00000023845	chd1l	96	63.394	ENSANAG00000024347	CHD1L	97	62.429	Aotus_nancymaae
ENSLBEG00000023845	chd1l	96	82.524	ENSACLG00000019304	chd1l	96	80.985	Astatotilapia_calliptera
ENSLBEG00000023845	chd1l	99	63.475	ENSAMXG00000012367	chd1l	98	61.182	Astyanax_mexicanus
ENSLBEG00000023845	chd1l	96	63.758	ENSBTAG00000020831	CHD1L	98	62.260	Bos_taurus
ENSLBEG00000023845	chd1l	96	63.515	ENSCJAG00000002406	CHD1L	96	62.857	Callithrix_jacchus
ENSLBEG00000023845	chd1l	96	60.970	ENSCAFG00000010944	CHD1L	98	60.181	Canis_familiaris
ENSLBEG00000023845	chd1l	99	61.882	ENSCAFG00020020121	CHD1L	98	62.330	Canis_lupus_dingo
ENSLBEG00000023845	chd1l	96	63.758	ENSCHIG00000013871	CHD1L	97	63.188	Capra_hircus
ENSLBEG00000023845	chd1l	96	63.152	ENSTSYG00000003005	CHD1L	99	63.232	Carlito_syrichta
ENSLBEG00000023845	chd1l	96	62.424	ENSCPOG00000009000	CHD1L	97	61.023	Cavia_porcellus
ENSLBEG00000023845	chd1l	96	61.212	ENSCCAG00000036079	CHD1L	96	60.800	Cebus_capucinus
ENSLBEG00000023845	chd1l	96	63.714	ENSCATG00000031044	CHD1L	96	63.406	Cercocebus_atys
ENSLBEG00000023845	chd1l	96	64.242	ENSCLAG00000000880	CHD1L	97	64.220	Chinchilla_lanigera
ENSLBEG00000023845	chd1l	96	64.000	ENSCSAG00000018386	CHD1L	96	63.751	Chlorocebus_sabaeus
ENSLBEG00000023845	chd1l	96	64.251	ENSCPBG00000002600	CHD1L	98	63.844	Chrysemys_picta_bellii
ENSLBEG00000023845	chd1l	96	63.714	ENSCANG00000020239	CHD1L	96	62.601	Colobus_angolensis_palliatus
ENSLBEG00000023845	chd1l	96	63.812	ENSCGRG00001021624	Chd1l	97	63.761	Cricetulus_griseus_chok1gshd
ENSLBEG00000023845	chd1l	96	63.812	ENSCGRG00000007554	Chd1l	100	63.934	Cricetulus_griseus_crigri
ENSLBEG00000023845	chd1l	97	80.529	ENSCVAG00000002595	chd1l	97	78.609	Cyprinodon_variegatus
ENSLBEG00000023845	chd1l	96	74.182	ENSDARG00000015471	chd1l	99	69.515	Danio_rerio
ENSLBEG00000023845	chd1l	98	63.227	ENSDNOG00000019504	CHD1L	96	63.326	Dasypus_novemcinctus
ENSLBEG00000023845	chd1l	96	63.571	ENSDORG00000013555	Chd1l	98	62.712	Dipodomys_ordii
ENSLBEG00000023845	chd1l	87	62.143	ENSETEG00000008445	CHD1L	88	60.771	Echinops_telfairi
ENSLBEG00000023845	chd1l	66	69.565	ENSEBUG00000005791	chd1l	74	69.565	Eptatretus_burgeri
ENSLBEG00000023845	chd1l	96	63.879	ENSEASG00005007364	CHD1L	100	63.845	Equus_asinus_asinus
ENSLBEG00000023845	chd1l	96	63.758	ENSECAG00000008915	CHD1L	100	63.724	Equus_caballus
ENSLBEG00000023845	chd1l	100	60.656	ENSELUG00000016844	chd1l	99	60.365	Esox_lucius
ENSLBEG00000023845	chd1l	96	63.438	ENSFCAG00000007777	CHD1L	96	62.989	Felis_catus
ENSLBEG00000023845	chd1l	96	61.501	ENSFALG00000006087	CHD1L	99	60.826	Ficedula_albicollis
ENSLBEG00000023845	chd1l	96	64.000	ENSFDAG00000012431	CHD1L	100	63.521	Fukomys_damarensis
ENSLBEG00000023845	chd1l	99	78.585	ENSFHEG00000012420	chd1l	100	78.389	Fundulus_heteroclitus
ENSLBEG00000023845	chd1l	96	62.712	ENSGALG00000015038	CHD1L	96	62.184	Gallus_gallus
ENSLBEG00000023845	chd1l	99	78.502	ENSGAFG00000018198	chd1l	100	78.585	Gambusia_affinis
ENSLBEG00000023845	chd1l	58	84.708	ENSGACG00000014042	chd1l	98	86.497	Gasterosteus_aculeatus
ENSLBEG00000023845	chd1l	97	64.405	ENSGAGG00000014432	CHD1L	96	64.830	Gopherus_agassizii
ENSLBEG00000023845	chd1l	96	63.305	ENSGGOG00000001067	CHD1L	97	62.557	Gorilla_gorilla
ENSLBEG00000023845	chd1l	98	80.664	ENSHBUG00000007464	chd1l	98	80.778	Haplochromis_burtoni
ENSLBEG00000023845	chd1l	96	62.788	ENSHGLG00000008933	CHD1L	97	62.400	Heterocephalus_glaber_female
ENSLBEG00000023845	chd1l	96	62.349	ENSHGLG00100007155	CHD1L	99	61.916	Heterocephalus_glaber_male
ENSLBEG00000023845	chd1l	97	75.390	ENSHCOG00000012787	chd1l	92	76.000	Hippocampus_comes
ENSLBEG00000023845	chd1l	96	69.249	ENSIPUG00000022617	chd1l	100	65.310	Ictalurus_punctatus
ENSLBEG00000023845	chd1l	96	59.976	ENSSTOG00000007032	CHD1L	95	59.346	Ictidomys_tridecemlineatus
ENSLBEG00000023845	chd1l	100	80.369	ENSKMAG00000014358	chd1l	100	80.369	Kryptolebias_marmoratus
ENSLBEG00000023845	chd1l	96	61.025	ENSLACG00000006262	CHD1L	97	58.651	Latimeria_chalumnae
ENSLBEG00000023845	chd1l	96	72.364	ENSLOCG00000010574	chd1l	99	68.164	Lepisosteus_oculatus
ENSLBEG00000023845	chd1l	98	62.012	ENSLAFG00000018136	CHD1L	99	63.520	Loxodonta_africana
ENSLBEG00000023845	chd1l	96	63.835	ENSMFAG00000043562	CHD1L	99	63.603	Macaca_fascicularis
ENSLBEG00000023845	chd1l	96	63.835	ENSMMUG00000009024	CHD1L	96	63.521	Macaca_mulatta
ENSLBEG00000023845	chd1l	96	63.835	ENSMNEG00000039905	CHD1L	96	63.521	Macaca_nemestrina
ENSLBEG00000023845	chd1l	96	63.835	ENSMLEG00000030900	CHD1L	96	63.521	Mandrillus_leucophaeus
ENSLBEG00000023845	chd1l	100	82.216	ENSMAMG00000012822	chd1l	100	83.368	Mastacembelus_armatus
ENSLBEG00000023845	chd1l	96	82.646	ENSMZEG00005020830	chd1l	95	81.081	Maylandia_zebra
ENSLBEG00000023845	chd1l	96	61.985	ENSMGAG00000014304	CHD1L	99	62.937	Meleagris_gallopavo
ENSLBEG00000023845	chd1l	96	64.606	ENSMICG00000002497	CHD1L	96	64.401	Microcebus_murinus
ENSLBEG00000023845	chd1l	96	64.087	ENSMOCG00000006305	Chd1l	97	63.337	Microtus_ochrogaster
ENSLBEG00000023845	chd1l	96	76.727	ENSMMOG00000005964	chd1l	99	70.981	Mola_mola
ENSLBEG00000023845	chd1l	96	62.999	ENSMODG00000018717	CHD1L	97	62.900	Monodelphis_domestica
ENSLBEG00000023845	chd1l	99	83.934	ENSMALG00000014675	chd1l	99	83.934	Monopterus_albus
ENSLBEG00000023845	chd1l	98	62.840	MGP_CAROLIEiJ_G0025401	Chd1l	97	63.886	Mus_caroli
ENSLBEG00000023845	chd1l	97	63.064	ENSMUSG00000028089	Chd1l	97	63.616	Mus_musculus
ENSLBEG00000023845	chd1l	98	63.046	MGP_PahariEiJ_G0026845	Chd1l	97	63.959	Mus_pahari
ENSLBEG00000023845	chd1l	97	63.158	MGP_SPRETEiJ_G0026347	Chd1l	97	63.730	Mus_spretus
ENSLBEG00000023845	chd1l	96	63.879	ENSMPUG00000000615	CHD1L	97	63.170	Mustela_putorius_furo
ENSLBEG00000023845	chd1l	96	63.658	ENSMLUG00000007573	CHD1L	95	62.971	Myotis_lucifugus
ENSLBEG00000023845	chd1l	96	60.145	ENSNGAG00000000908	Chd1l	98	60.648	Nannospalax_galili
ENSLBEG00000023845	chd1l	98	76.986	ENSNBRG00000006021	chd1l	95	78.604	Neolamprologus_brichardi
ENSLBEG00000023845	chd1l	96	63.030	ENSNLEG00000000179	CHD1L	96	62.831	Nomascus_leucogenys
ENSLBEG00000023845	chd1l	96	53.019	ENSOPRG00000006973	CHD1L	91	64.118	Ochotona_princeps
ENSLBEG00000023845	chd1l	97	60.885	ENSODEG00000002494	CHD1L	97	60.137	Octodon_degus
ENSLBEG00000023845	chd1l	100	81.123	ENSONIG00000003183	chd1l	100	80.929	Oreochromis_niloticus
ENSLBEG00000023845	chd1l	90	60.000	ENSOANG00000003068	CHD1L	93	60.847	Ornithorhynchus_anatinus
ENSLBEG00000023845	chd1l	96	59.785	ENSOCUG00000009336	CHD1L	96	59.318	Oryctolagus_cuniculus
ENSLBEG00000023845	chd1l	98	76.520	ENSORLG00000003673	chd1l	98	74.778	Oryzias_latipes
ENSLBEG00000023845	chd1l	96	78.155	ENSORLG00020005123	chd1l	99	75.884	Oryzias_latipes_hni
ENSLBEG00000023845	chd1l	97	77.939	ENSORLG00015001680	chd1l	99	76.104	Oryzias_latipes_hsok
ENSLBEG00000023845	chd1l	81	74.231	ENSOMEG00000006109	chd1l	96	74.671	Oryzias_melastigma
ENSLBEG00000023845	chd1l	96	63.075	ENSOGAG00000008775	CHD1L	96	62.946	Otolemur_garnettii
ENSLBEG00000023845	chd1l	96	63.636	ENSOARG00000020547	CHD1L	99	63.594	Ovis_aries
ENSLBEG00000023845	chd1l	99	61.871	ENSPPAG00000039193	CHD1L	99	63.362	Pan_paniscus
ENSLBEG00000023845	chd1l	96	63.801	ENSPPRG00000010258	CHD1L	96	63.103	Panthera_pardus
ENSLBEG00000023845	chd1l	99	61.871	ENSPTRG00000001220	CHD1L	97	62.900	Pan_troglodytes
ENSLBEG00000023845	chd1l	99	61.744	ENSPANG00000009170	CHD1L	96	63.521	Papio_anubis
ENSLBEG00000023845	chd1l	97	72.182	ENSPKIG00000022166	chd1l	97	70.024	Paramormyrops_kingsleyae
ENSLBEG00000023845	chd1l	96	64.571	ENSPSIG00000012595	CHD1L	96	62.670	Pelodiscus_sinensis
ENSLBEG00000023845	chd1l	96	64.087	ENSPEMG00000013528	Chd1l	97	62.613	Peromyscus_maniculatus_bairdii
ENSLBEG00000023845	chd1l	94	63.041	ENSPCIG00000030409	CHD1L	99	63.362	Phascolarctos_cinereus
ENSLBEG00000023845	chd1l	99	78.447	ENSPFOG00000015948	chd1l	100	77.713	Poecilia_formosa
ENSLBEG00000023845	chd1l	99	78.912	ENSPLAG00000015145	chd1l	100	78.509	Poecilia_latipinna
ENSLBEG00000023845	chd1l	96	80.218	ENSPMEG00000008720	chd1l	99	78.898	Poecilia_mexicana
ENSLBEG00000023845	chd1l	96	81.127	ENSPREG00000017885	chd1l	98	79.310	Poecilia_reticulata
ENSLBEG00000023845	chd1l	96	63.515	ENSPPYG00000000946	CHD1L	97	62.799	Pongo_abelii
ENSLBEG00000023845	chd1l	91	58.238	ENSPCAG00000005959	CHD1L	90	57.934	Procavia_capensis
ENSLBEG00000023845	chd1l	96	59.758	ENSPVAG00000006084	CHD1L	100	60.258	Pteropus_vampyrus
ENSLBEG00000023845	chd1l	99	80.094	ENSPNYG00000013001	chd1l	97	80.892	Pundamilia_nyererei
ENSLBEG00000023845	chd1l	100	69.119	ENSPNAG00000011881	chd1l	100	69.119	Pygocentrus_nattereri
ENSLBEG00000023845	chd1l	96	63.691	ENSRNOG00000017669	Chd1l	97	64.155	Rattus_norvegicus
ENSLBEG00000023845	chd1l	96	63.714	ENSRBIG00000041272	CHD1L	96	62.486	Rhinopithecus_bieti
ENSLBEG00000023845	chd1l	96	63.879	ENSRROG00000041354	CHD1L	95	63.102	Rhinopithecus_roxellana
ENSLBEG00000023845	chd1l	96	62.015	ENSSHAG00000017395	CHD1L	97	61.998	Sarcophilus_harrisii
ENSLBEG00000023845	chd1l	96	72.242	ENSSFOG00015003649	chd1l	98	70.575	Scleropages_formosus
ENSLBEG00000023845	chd1l	100	80.443	ENSSMAG00000019377	chd1l	100	80.154	Scophthalmus_maximus
ENSLBEG00000023845	chd1l	96	85.000	ENSSDUG00000019831	chd1l	97	81.839	Seriola_dumerili
ENSLBEG00000023845	chd1l	96	84.364	ENSSLDG00000012714	chd1l	95	84.056	Seriola_lalandi_dorsalis
ENSLBEG00000023845	chd1l	96	61.259	ENSSPUG00000016865	CHD1L	98	61.617	Sphenodon_punctatus
ENSLBEG00000023845	chd1l	96	84.587	ENSSPAG00000017653	chd1l	99	83.264	Stegastes_partitus
ENSLBEG00000023845	chd1l	96	62.515	ENSSSCG00000006701	CHD1L	98	61.916	Sus_scrofa
ENSLBEG00000023845	chd1l	96	62.228	ENSTGUG00000013392	-	99	62.357	Taeniopygia_guttata
ENSLBEG00000023845	chd1l	96	69.175	ENSTNIG00000004902	chd1l	99	69.276	Tetraodon_nigroviridis
ENSLBEG00000023845	chd1l	96	61.333	ENSTTRG00000011711	CHD1L	99	61.215	Tursiops_truncatus
ENSLBEG00000023845	chd1l	99	63.152	ENSUAMG00000021991	CHD1L	97	64.073	Ursus_americanus
ENSLBEG00000023845	chd1l	99	63.033	ENSUMAG00000009733	CHD1L	97	63.254	Ursus_maritimus
ENSLBEG00000023845	chd1l	96	62.788	ENSVVUG00000007316	CHD1L	93	62.187	Vulpes_vulpes
ENSLBEG00000023845	chd1l	96	78.710	ENSXCOG00000008336	chd1l	98	75.349	Xiphophorus_couchianus
ENSLBEG00000023845	chd1l	99	79.065	ENSXMAG00000015898	chd1l	100	79.065	Xiphophorus_maculatus