EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000023881 (Gene tree)
Gene ID: 109981757
Gene Symbol: snrpc
Alias: U1C|chunp6909|zgc:109792
Full Name: small nuclear ribonucleoprotein polypeptide C
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 5603 bases
Position: chrFKLU01000035.1:342250-347852
Accession: 109981757
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000031646	zf-U1	PF06220.12	1.3e-22	1	1
ENSLBEP00000031656	zf-U1	PF06220.12	2.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000033082	-	1324	-	ENSLBEP00000031656	171 (aa)	-	-
ENSLBET00000033072	-	1258	XM_020630700	ENSLBEP00000031646	149 (aa)	XP_020486356	UPI0009B3B1FB

Gene Model

Click here to download ENSLBEG00000023881's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000023881's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000023881	snrpc	100	99.329	ENSAPOG00000013907	snrpc	100	99.329	Acanthochromis_polyacanthus
ENSLBEG00000023881	snrpc	98	93.836	ENSACIG00000010867	snrpc	100	73.288	Amphilophus_citrinellus
ENSLBEG00000023881	snrpc	100	99.329	ENSAOCG00000021151	snrpc	100	99.329	Amphiprion_ocellaris
ENSLBEG00000023881	snrpc	100	99.329	ENSAPEG00000023221	snrpc	100	99.329	Amphiprion_percula
ENSLBEG00000023881	snrpc	100	99.329	ENSATEG00000025133	snrpc	100	99.329	Anabas_testudineus
ENSLBEG00000023881	snrpc	100	67.500	ENSANAG00000021026	-	67	55.000	Aotus_nancymaae
ENSLBEG00000023881	snrpc	100	97.987	ENSACLG00000000843	snrpc	100	97.987	Astatotilapia_calliptera
ENSLBEG00000023881	snrpc	100	96.667	ENSCSEG00000016845	snrpc	100	96.667	Cynoglossus_semilaevis
ENSLBEG00000023881	snrpc	100	97.987	ENSCVAG00000014297	snrpc	100	97.987	Cyprinodon_variegatus
ENSLBEG00000023881	snrpc	73	99.083	ENSFHEG00000016667	snrpc	97	99.083	Fundulus_heteroclitus
ENSLBEG00000023881	snrpc	99	96.599	ENSGMOG00000000090	snrpc	100	97.279	Gadus_morhua
ENSLBEG00000023881	snrpc	100	97.987	ENSGAFG00000016115	snrpc	100	97.987	Gambusia_affinis
ENSLBEG00000023881	snrpc	99	98.639	ENSGACG00000004899	snrpc	99	98.658	Gasterosteus_aculeatus
ENSLBEG00000023881	snrpc	100	97.987	ENSHBUG00000011637	snrpc	100	97.987	Haplochromis_burtoni
ENSLBEG00000023881	snrpc	100	95.973	ENSHCOG00000001596	snrpc	100	95.973	Hippocampus_comes
ENSLBEG00000023881	snrpc	100	97.987	ENSKMAG00000016356	snrpc	100	97.987	Kryptolebias_marmoratus
ENSLBEG00000023881	snrpc	100	98.658	ENSMAMG00000003857	snrpc	100	98.658	Mastacembelus_armatus
ENSLBEG00000023881	snrpc	100	97.987	ENSMZEG00005002199	snrpc	100	97.987	Maylandia_zebra
ENSLBEG00000023881	snrpc	98	97.945	ENSMMOG00000013149	snrpc	100	97.945	Mola_mola
ENSLBEG00000023881	snrpc	100	97.315	ENSMALG00000001197	snrpc	100	97.315	Monopterus_albus
ENSLBEG00000023881	snrpc	100	97.987	ENSONIG00000014757	snrpc	100	97.987	Oreochromis_niloticus
ENSLBEG00000023881	snrpc	89	74.830	ENSOANG00000003405	SNRPC	99	64.626	Ornithorhynchus_anatinus
ENSLBEG00000023881	snrpc	96	96.503	ENSORLG00000007308	snrpc	97	96.503	Oryzias_latipes
ENSLBEG00000023881	snrpc	96	95.833	ENSORLG00020012607	SNRPC	97	95.833	Oryzias_latipes_hni
ENSLBEG00000023881	snrpc	74	97.297	ENSOMEG00000012014	snrpc	69	97.297	Oryzias_melastigma
ENSLBEG00000023881	snrpc	98	95.890	ENSPMGG00000022162	snrpc	100	95.890	Periophthalmus_magnuspinnatus
ENSLBEG00000023881	snrpc	100	97.987	ENSPFOG00000015174	snrpc	100	97.987	Poecilia_formosa
ENSLBEG00000023881	snrpc	100	97.987	ENSPLAG00000012311	snrpc	100	97.987	Poecilia_latipinna
ENSLBEG00000023881	snrpc	100	97.987	ENSPMEG00000010274	snrpc	100	97.987	Poecilia_mexicana
ENSLBEG00000023881	snrpc	99	77.551	ENSPREG00000013017	snrpc	81	82.468	Poecilia_reticulata
ENSLBEG00000023881	snrpc	98	82.877	ENSPNYG00000004900	snrpc	100	82.877	Pundamilia_nyererei
ENSLBEG00000023881	snrpc	100	99.329	ENSSMAG00000008029	snrpc	100	99.329	Scophthalmus_maximus
ENSLBEG00000023881	snrpc	100	99.329	ENSSDUG00000018895	snrpc	81	99.329	Seriola_dumerili
ENSLBEG00000023881	snrpc	100	99.329	ENSSLDG00000005034	snrpc	100	99.329	Seriola_lalandi_dorsalis
ENSLBEG00000023881	snrpc	100	99.329	ENSSPAG00000000914	snrpc	100	99.329	Stegastes_partitus
ENSLBEG00000023881	snrpc	100	96.644	ENSTRUG00000021651	snrpc	100	96.644	Takifugu_rubripes
ENSLBEG00000023881	snrpc	100	97.987	ENSXMAG00000017935	snrpc	100	97.987	Xiphophorus_maculatus