EuRBPDB

Description

Ensembl ID: ENSLBEG00000024075 (Gene tree)
Gene ID: 110001314
Gene Symbol: -
Alias: fc32h05|fi41c08|im:7140483|wu:fc32h05|wu:fi41c08
Full Name: peroxisome proliferator-activated receptor gamma coactivator-related protein 1-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 8268 bases
Position: chrFKLU01000788.1:56660-64927
Accession: 110001314
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000031908	RRM_1	PF00076.22	5.5e-10	1	1
ENSLBEP00000031889	RRM_1	PF00076.22	5.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000033347	-	4210	-	ENSLBEP00000031908	1139 (aa)	-	-
ENSLBET00000033328	-	4443	XM_020656788	ENSLBEP00000031889	1166 (aa)	XP_020512444	-

Gene Model

Protein-Protein Interaction (PPI)

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000024075	-	79	50.259	ENSAPOG00000001094	si:dkey-93h22.8	77	50.103	Acanthochromis_polyacanthus
ENSLBEG00000024075	-	59	58.333	ENSDARG00000098666	si:dkey-93h22.8	69	62.879	Danio_rerio
ENSLBEG00000024075	-	51	46.032	ENSELUG00000021650	pprc1	52	33.704	Esox_lucius
ENSLBEG00000024075	-	79	82.278	ENSGAFG00000011120	si:dkey-93h22.8	84	82.692	Gambusia_affinis
ENSLBEG00000024075	-	83	38.350	ENSHCOG00000015325	-	56	45.846	Hippocampus_comes
ENSLBEG00000024075	-	83	54.335	ENSIPUG00000021651	si:dkey-93h22.8	51	71.134	Ictalurus_punctatus
ENSLBEG00000024075	-	57	41.700	ENSORLG00000012355	si:dkey-93h22.8	80	75.641	Oryzias_latipes
ENSLBEG00000024075	-	57	41.247	ENSORLG00020004449	si:dkey-93h22.8	80	75.641	Oryzias_latipes_hni
ENSLBEG00000024075	-	57	41.616	ENSORLG00015002960	si:dkey-93h22.8	80	76.282	Oryzias_latipes_hsok
ENSLBEG00000024075	-	72	78.400	ENSOMEG00000012140	si:dkey-93h22.8	82	79.333	Oryzias_melastigma
ENSLBEG00000024075	-	56	81.646	ENSPFOG00000001320	si:dkey-93h22.8	59	82.051	Poecilia_formosa
ENSLBEG00000024075	-	56	81.646	ENSPLAG00000001769	si:dkey-93h22.8	58	82.051	Poecilia_latipinna
ENSLBEG00000024075	-	56	81.646	ENSPMEG00000014605	si:dkey-93h22.8	59	82.051	Poecilia_mexicana
ENSLBEG00000024075	-	71	39.344	ENSPREG00000000446	si:dkey-93h22.8	71	39.461	Poecilia_reticulata
ENSLBEG00000024075	-	85	55.114	ENSPNAG00000023094	si:dkey-93h22.8	78	67.424	Pygocentrus_nattereri
ENSLBEG00000024075	-	58	82.278	ENSXMAG00000000243	si:dkey-93h22.8	58	82.692	Xiphophorus_maculatus