EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000024225 (Gene tree)
Gene ID: 109982464
Gene Symbol: twistnb
Alias: -
Full Name: TWIST neighbor
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 3627 bases
Position: chrFKLU01000043.1:543222-546848
Accession: 109982464
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000032121	SHS2_Rpb7-N	PF03876.17	4.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000033563	-	2005	XM_020631697	ENSLBEP00000032121	378 (aa)	XP_020487353	UPI0009B49180

Gene Model

Click here to download ENSLBEG00000024225's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000024225's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000024225	twistnb	100	71.466	ENSAPOG00000011796	twistnb	100	71.466	Acanthochromis_polyacanthus
ENSLBEG00000024225	twistnb	98	68.617	ENSACIG00000020400	twistnb	96	67.308	Amphilophus_citrinellus
ENSLBEG00000024225	twistnb	99	71.728	ENSAOCG00000024200	twistnb	99	71.728	Amphiprion_ocellaris
ENSLBEG00000024225	twistnb	99	72.251	ENSAPEG00000016750	twistnb	99	72.251	Amphiprion_percula
ENSLBEG00000024225	twistnb	94	69.167	ENSATEG00000017956	twistnb	99	69.393	Anabas_testudineus
ENSLBEG00000024225	twistnb	51	54.950	ENSANAG00000026418	TWISTNB	96	42.151	Aotus_nancymaae
ENSLBEG00000024225	twistnb	100	66.230	ENSACLG00000022280	twistnb	94	65.885	Astatotilapia_calliptera
ENSLBEG00000024225	twistnb	61	55.217	ENSAMXG00000035868	twistnb	67	55.217	Astyanax_mexicanus
ENSLBEG00000024225	twistnb	83	46.349	ENSBTAG00000006721	TWISTNB	92	44.172	Bos_taurus
ENSLBEG00000024225	twistnb	51	55.941	ENSCJAG00000001148	TWISTNB	96	44.058	Callithrix_jacchus
ENSLBEG00000024225	twistnb	82	45.110	ENSCAFG00000002511	TWISTNB	91	43.636	Canis_familiaris
ENSLBEG00000024225	twistnb	82	45.687	ENSCAFG00020002140	TWISTNB	85	45.399	Canis_lupus_dingo
ENSLBEG00000024225	twistnb	51	56.701	ENSCHIG00000024078	TWISTNB	92	44.923	Capra_hircus
ENSLBEG00000024225	twistnb	53	55.072	ENSCPOG00000031651	TWISTNB	97	42.363	Cavia_porcellus
ENSLBEG00000024225	twistnb	54	55.122	ENSCLAG00000012696	TWISTNB	96	45.349	Chinchilla_lanigera
ENSLBEG00000024225	twistnb	86	44.343	ENSCPBG00000000367	TWISTNB	55	61.494	Chrysemys_picta_bellii
ENSLBEG00000024225	twistnb	67	72.157	ENSCVAG00000014324	twistnb	95	60.383	Cyprinodon_variegatus
ENSLBEG00000024225	twistnb	88	45.767	ENSDARG00000024416	twistnb	95	45.383	Danio_rerio
ENSLBEG00000024225	twistnb	52	55.172	ENSDORG00000007795	Twistnb	98	41.071	Dipodomys_ordii
ENSLBEG00000024225	twistnb	54	53.917	ENSEASG00005021702	TWISTNB	94	42.857	Equus_asinus_asinus
ENSLBEG00000024225	twistnb	54	53.917	ENSECAG00000014563	TWISTNB	94	42.165	Equus_caballus
ENSLBEG00000024225	twistnb	98	55.851	ENSELUG00000000098	TWISTNB	98	54.348	Esox_lucius
ENSLBEG00000024225	twistnb	81	40.923	ENSFALG00000009761	TWISTNB	65	49.749	Ficedula_albicollis
ENSLBEG00000024225	twistnb	99	61.230	ENSFHEG00000013318	twistnb	95	61.773	Fundulus_heteroclitus
ENSLBEG00000024225	twistnb	61	75.862	ENSGAFG00000018309	twistnb	80	66.330	Gambusia_affinis
ENSLBEG00000024225	twistnb	68	66.016	ENSGACG00000006425	twistnb	77	77.723	Gasterosteus_aculeatus
ENSLBEG00000024225	twistnb	100	65.969	ENSHBUG00000020155	twistnb	94	65.625	Haplochromis_burtoni
ENSLBEG00000024225	twistnb	89	47.507	ENSHGLG00000010976	TWISTNB	91	43.478	Heterocephalus_glaber_female
ENSLBEG00000024225	twistnb	79	48.344	ENSHGLG00100005410	TWISTNB	91	43.478	Heterocephalus_glaber_male
ENSLBEG00000024225	twistnb	98	45.789	ENSIPUG00000004117	twistnb	95	47.324	Ictalurus_punctatus
ENSLBEG00000024225	twistnb	51	56.410	ENSSTOG00000022702	TWISTNB	53	56.410	Ictidomys_tridecemlineatus
ENSLBEG00000024225	twistnb	51	57.436	ENSJJAG00000015887	Twistnb	61	57.436	Jaculus_jaculus
ENSLBEG00000024225	twistnb	100	63.947	ENSKMAG00000001591	twistnb	100	63.446	Kryptolebias_marmoratus
ENSLBEG00000024225	twistnb	98	42.819	ENSLACG00000010508	TWISTNB	65	52.321	Latimeria_chalumnae
ENSLBEG00000024225	twistnb	52	62.000	ENSLOCG00000011399	twistnb	60	62.000	Lepisosteus_oculatus
ENSLBEG00000024225	twistnb	51	56.436	ENSLAFG00000008755	TWISTNB	97	46.628	Loxodonta_africana
ENSLBEG00000024225	twistnb	100	66.230	ENSMZEG00005007561	twistnb	94	65.885	Maylandia_zebra
ENSLBEG00000024225	twistnb	100	63.776	ENSMMOG00000020085	twistnb	100	63.520	Mola_mola
ENSLBEG00000024225	twistnb	100	59.645	ENSMALG00000016407	twistnb	100	60.000	Monopterus_albus
ENSLBEG00000024225	twistnb	79	47.176	ENSMPUG00000013948	TWISTNB	85	45.171	Mustela_putorius_furo
ENSLBEG00000024225	twistnb	95	66.022	ENSNBRG00000008652	twistnb	100	65.885	Neolamprologus_brichardi
ENSLBEG00000024225	twistnb	96	63.043	ENSORLG00000004005	twistnb	86	63.736	Oryzias_latipes
ENSLBEG00000024225	twistnb	100	64.304	ENSORLG00020002579	twistnb	100	64.042	Oryzias_latipes_hni
ENSLBEG00000024225	twistnb	100	63.780	ENSORLG00015013403	twistnb	89	63.517	Oryzias_latipes_hsok
ENSLBEG00000024225	twistnb	92	43.840	ENSOARG00000009803	TWISTNB	62	53.917	Ovis_aries
ENSLBEG00000024225	twistnb	79	45.545	ENSPPRG00000005877	TWISTNB	94	43.284	Panthera_pardus
ENSLBEG00000024225	twistnb	75	46.479	ENSPTIG00000021539	TWISTNB	92	45.238	Panthera_tigris_altaica
ENSLBEG00000024225	twistnb	67	53.543	ENSPKIG00000025635	twistnb	69	53.543	Paramormyrops_kingsleyae
ENSLBEG00000024225	twistnb	97	61.725	ENSPMGG00000019023	twistnb	94	61.389	Periophthalmus_magnuspinnatus
ENSLBEG00000024225	twistnb	78	43.003	ENSPCIG00000017456	TWISTNB	87	42.208	Phascolarctos_cinereus
ENSLBEG00000024225	twistnb	100	66.230	ENSPNYG00000002674	twistnb	100	65.625	Pundamilia_nyererei
ENSLBEG00000024225	twistnb	93	43.767	ENSPNAG00000011956	twistnb	67	51.600	Pygocentrus_nattereri
ENSLBEG00000024225	twistnb	52	58.974	ENSSFOG00015012788	twistnb	77	48.148	Scleropages_formosus
ENSLBEG00000024225	twistnb	100	70.757	ENSSMAG00000012792	twistnb	100	71.916	Scophthalmus_maximus
ENSLBEG00000024225	twistnb	100	73.037	ENSSDUG00000007038	twistnb	100	73.560	Seriola_dumerili
ENSLBEG00000024225	twistnb	51	51.562	ENSSPUG00000007595	TWISTNB	63	51.562	Sphenodon_punctatus
ENSLBEG00000024225	twistnb	100	69.816	ENSSPAG00000005871	twistnb	100	69.816	Stegastes_partitus
ENSLBEG00000024225	twistnb	83	45.625	ENSSSCG00000025298	TWISTNB	92	43.865	Sus_scrofa
ENSLBEG00000024225	twistnb	91	58.430	ENSTNIG00000017778	twistnb	98	56.305	Tetraodon_nigroviridis
ENSLBEG00000024225	twistnb	51	57.513	ENSVVUG00000008386	TWISTNB	92	46.319	Vulpes_vulpes
ENSLBEG00000024225	twistnb	66	74.704	ENSXCOG00000020199	twistnb	80	69.072	Xiphophorus_couchianus