EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000024261 (Gene tree)
Gene ID: 109987970
Gene Symbol: lsg1
Alias: fb99b06|wu:fb99b06|zgc:76988
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 5870 bases
Position: chrFKLU01000129.1:707435-713304
Accession: 109987970
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000032183	MMR_HSR1	PF01926.23	1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000033625	-	1809	XM_020639266	ENSLBEP00000032183	602 (aa)	XP_020494922	-

Gene Model

Click here to download ENSLBEG00000024261's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000024261's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000024261	lsg1	67	33.636	ENSLBEG00000011038	gnl1	82	30.019

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000024261	lsg1	99	63.318	ENSG00000041802	LSG1	90	77.019	Homo_sapiens
ENSLBEG00000024261	lsg1	100	77.813	ENSAPOG00000009694	lsg1	99	78.641	Acanthochromis_polyacanthus
ENSLBEG00000024261	lsg1	100	61.818	ENSAMEG00000009343	LSG1	98	62.154	Ailuropoda_melanoleuca
ENSLBEG00000024261	lsg1	98	81.169	ENSACIG00000012406	lsg1	98	80.682	Amphilophus_citrinellus
ENSLBEG00000024261	lsg1	100	79.114	ENSAOCG00000016066	lsg1	99	78.191	Amphiprion_ocellaris
ENSLBEG00000024261	lsg1	100	79.545	ENSAPEG00000003252	lsg1	99	78.837	Amphiprion_percula
ENSLBEG00000024261	lsg1	98	81.906	ENSATEG00000011794	lsg1	98	82.391	Anabas_testudineus
ENSLBEG00000024261	lsg1	100	78.769	ENSACLG00000000520	lsg1	98	77.865	Astatotilapia_calliptera
ENSLBEG00000024261	lsg1	100	70.000	ENSAMXG00000008271	lsg1	98	71.429	Astyanax_mexicanus
ENSLBEG00000024261	lsg1	99	63.804	ENSBTAG00000008461	LSG1	98	64.789	Bos_taurus
ENSLBEG00000024261	lsg1	83	42.323	WBGene00016907	C53H9.2	82	45.195	Caenorhabditis_elegans
ENSLBEG00000024261	lsg1	100	63.988	ENSCHIG00000015769	LSG1	98	64.669	Capra_hircus
ENSLBEG00000024261	lsg1	99	62.822	ENSTSYG00000001447	LSG1	98	63.158	Carlito_syrichta
ENSLBEG00000024261	lsg1	94	64.892	ENSCAPG00000009856	LSG1	99	64.892	Cavia_aperea
ENSLBEG00000024261	lsg1	99	62.861	ENSCATG00000042060	LSG1	98	61.335	Cercocebus_atys
ENSLBEG00000024261	lsg1	99	62.861	ENSCSAG00000008796	LSG1	90	62.578	Chlorocebus_sabaeus
ENSLBEG00000024261	lsg1	100	63.939	ENSCPBG00000015941	LSG1	82	63.679	Chrysemys_picta_bellii
ENSLBEG00000024261	lsg1	84	51.186	ENSCING00000007079	-	97	50.612	Ciona_intestinalis
ENSLBEG00000024261	lsg1	93	46.690	ENSCSAVG00000002514	-	98	50.509	Ciona_savignyi
ENSLBEG00000024261	lsg1	99	62.861	ENSCANG00000030709	LSG1	98	62.422	Colobus_angolensis_palliatus
ENSLBEG00000024261	lsg1	99	64.263	ENSCGRG00001019846	Lsg1	98	64.263	Cricetulus_griseus_chok1gshd
ENSLBEG00000024261	lsg1	99	63.988	ENSCGRG00000014617	Lsg1	98	63.722	Cricetulus_griseus_crigri
ENSLBEG00000024261	lsg1	98	76.480	ENSCSEG00000008522	lsg1	98	76.000	Cynoglossus_semilaevis
ENSLBEG00000024261	lsg1	97	78.140	ENSCVAG00000002484	lsg1	98	78.084	Cyprinodon_variegatus
ENSLBEG00000024261	lsg1	100	75.781	ENSDARG00000015352	lsg1	98	75.559	Danio_rerio
ENSLBEG00000024261	lsg1	99	62.652	ENSDNOG00000006224	LSG1	98	61.742	Dasypus_novemcinctus
ENSLBEG00000024261	lsg1	99	50.162	FBgn0266284	Ns3	98	50.575	Drosophila_melanogaster
ENSLBEG00000024261	lsg1	87	68.000	ENSETEG00000003888	LSG1	87	72.581	Echinops_telfairi
ENSLBEG00000024261	lsg1	87	55.497	ENSEBUG00000003119	lsg1	85	54.974	Eptatretus_burgeri
ENSLBEG00000024261	lsg1	86	58.974	ENSEEUG00000015217	LSG1	75	58.974	Erinaceus_europaeus
ENSLBEG00000024261	lsg1	100	71.860	ENSELUG00000023973	lsg1	98	72.757	Esox_lucius
ENSLBEG00000024261	lsg1	100	62.064	ENSFCAG00000024957	LSG1	98	62.693	Felis_catus
ENSLBEG00000024261	lsg1	92	60.749	ENSFALG00000007210	LSG1	94	60.261	Ficedula_albicollis
ENSLBEG00000024261	lsg1	99	61.934	ENSFDAG00000017373	LSG1	98	62.739	Fukomys_damarensis
ENSLBEG00000024261	lsg1	97	78.170	ENSFHEG00000003680	lsg1	98	77.636	Fundulus_heteroclitus
ENSLBEG00000024261	lsg1	98	72.276	ENSGMOG00000015834	lsg1	88	81.226	Gadus_morhua
ENSLBEG00000024261	lsg1	99	59.758	ENSGALG00000007058	LSG1	86	60.031	Gallus_gallus
ENSLBEG00000024261	lsg1	97	77.541	ENSGAFG00000015831	lsg1	98	77.977	Gambusia_affinis
ENSLBEG00000024261	lsg1	98	80.769	ENSGACG00000009323	lsg1	98	80.769	Gasterosteus_aculeatus
ENSLBEG00000024261	lsg1	100	79.595	ENSHBUG00000005659	lsg1	98	79.332	Haplochromis_burtoni
ENSLBEG00000024261	lsg1	99	62.559	ENSHGLG00000017390	LSG1	98	62.945	Heterocephalus_glaber_female
ENSLBEG00000024261	lsg1	99	62.559	ENSHGLG00100018587	LSG1	98	62.945	Heterocephalus_glaber_male
ENSLBEG00000024261	lsg1	97	78.686	ENSHCOG00000016848	lsg1	98	78.788	Hippocampus_comes
ENSLBEG00000024261	lsg1	100	73.968	ENSIPUG00000008631	lsg1	98	73.984	Ictalurus_punctatus
ENSLBEG00000024261	lsg1	74	56.886	ENSSTOG00000010234	LSG1	92	57.800	Ictidomys_tridecemlineatus
ENSLBEG00000024261	lsg1	99	63.893	ENSJJAG00000015513	Lsg1	98	64.434	Jaculus_jaculus
ENSLBEG00000024261	lsg1	98	79.305	ENSKMAG00000009681	lsg1	98	79.305	Kryptolebias_marmoratus
ENSLBEG00000024261	lsg1	100	64.361	ENSLACG00000013399	LSG1	98	64.427	Latimeria_chalumnae
ENSLBEG00000024261	lsg1	98	69.969	ENSLOCG00000004918	lsg1	98	69.969	Lepisosteus_oculatus
ENSLBEG00000024261	lsg1	99	62.791	ENSLAFG00000012919	-	98	62.362	Loxodonta_africana
ENSLBEG00000024261	lsg1	99	62.557	ENSMFAG00000039903	LSG1	98	61.025	Macaca_fascicularis
ENSLBEG00000024261	lsg1	99	62.557	ENSMMUG00000010708	LSG1	98	62.267	Macaca_mulatta
ENSLBEG00000024261	lsg1	99	62.557	ENSMNEG00000031538	LSG1	98	61.180	Macaca_nemestrina
ENSLBEG00000024261	lsg1	99	62.405	ENSMLEG00000041184	LSG1	98	62.267	Mandrillus_leucophaeus
ENSLBEG00000024261	lsg1	100	81.350	ENSMAMG00000000470	lsg1	98	81.609	Mastacembelus_armatus
ENSLBEG00000024261	lsg1	100	79.439	ENSMZEG00005017865	lsg1	98	79.173	Maylandia_zebra
ENSLBEG00000024261	lsg1	88	61.356	ENSMGAG00000007050	LSG1	99	61.670	Meleagris_gallopavo
ENSLBEG00000024261	lsg1	97	59.744	ENSMAUG00000016976	Lsg1	97	60.099	Mesocricetus_auratus
ENSLBEG00000024261	lsg1	99	62.957	ENSMICG00000049087	LSG1	98	62.830	Microcebus_murinus
ENSLBEG00000024261	lsg1	99	62.963	ENSMOCG00000022136	Lsg1	98	63.150	Microtus_ochrogaster
ENSLBEG00000024261	lsg1	98	81.664	ENSMMOG00000008884	lsg1	98	81.282	Mola_mola
ENSLBEG00000024261	lsg1	99	55.677	ENSMODG00000019828	LSG1	98	55.172	Monodelphis_domestica
ENSLBEG00000024261	lsg1	100	64.286	MGP_CAROLIEiJ_G0020648	Lsg1	98	64.659	Mus_caroli
ENSLBEG00000024261	lsg1	100	64.286	ENSMUSG00000022538	Lsg1	98	64.659	Mus_musculus
ENSLBEG00000024261	lsg1	98	63.438	MGP_PahariEiJ_G0016352	Lsg1	98	63.780	Mus_pahari
ENSLBEG00000024261	lsg1	100	63.665	MGP_SPRETEiJ_G0021544	Lsg1	98	64.025	Mus_spretus
ENSLBEG00000024261	lsg1	100	62.064	ENSMPUG00000003734	LSG1	98	62.558	Mustela_putorius_furo
ENSLBEG00000024261	lsg1	100	62.940	ENSMLUG00000012548	LSG1	98	62.813	Myotis_lucifugus
ENSLBEG00000024261	lsg1	99	63.608	ENSNGAG00000021872	Lsg1	98	64.353	Nannospalax_galili
ENSLBEG00000024261	lsg1	99	63.318	ENSNLEG00000008293	LSG1	98	63.199	Nomascus_leucogenys
ENSLBEG00000024261	lsg1	71	71.134	ENSMEUG00000009041	-	74	71.134	Notamacropus_eugenii
ENSLBEG00000024261	lsg1	100	78.516	ENSONIG00000002635	lsg1	98	78.233	Oreochromis_niloticus
ENSLBEG00000024261	lsg1	95	65.798	ENSOANG00000012742	LSG1	99	65.798	Ornithorhynchus_anatinus
ENSLBEG00000024261	lsg1	99	63.733	ENSOCUG00000004817	LSG1	98	63.777	Oryctolagus_cuniculus
ENSLBEG00000024261	lsg1	98	79.104	ENSORLG00000007695	lsg1	98	78.441	Oryzias_latipes
ENSLBEG00000024261	lsg1	98	78.069	ENSORLG00020016286	lsg1	98	77.414	Oryzias_latipes_hni
ENSLBEG00000024261	lsg1	98	79.899	ENSORLG00015012025	lsg1	98	79.062	Oryzias_latipes_hsok
ENSLBEG00000024261	lsg1	98	77.907	ENSOMEG00000022379	lsg1	98	78.073	Oryzias_melastigma
ENSLBEG00000024261	lsg1	99	62.840	ENSOGAG00000003475	LSG1	98	62.866	Otolemur_garnettii
ENSLBEG00000024261	lsg1	100	63.456	ENSOARG00000020403	LSG1	98	64.431	Ovis_aries
ENSLBEG00000024261	lsg1	100	61.261	ENSPPRG00000010281	LSG1	98	61.715	Panthera_pardus
ENSLBEG00000024261	lsg1	100	62.064	ENSPTIG00000010789	LSG1	98	62.539	Panthera_tigris_altaica
ENSLBEG00000024261	lsg1	99	62.405	ENSPANG00000018249	LSG1	98	60.870	Papio_anubis
ENSLBEG00000024261	lsg1	99	72.310	ENSPKIG00000002895	lsg1	98	72.330	Paramormyrops_kingsleyae
ENSLBEG00000024261	lsg1	96	60.759	ENSPSIG00000009821	LSG1	99	59.810	Pelodiscus_sinensis
ENSLBEG00000024261	lsg1	95	77.685	ENSPMGG00000000931	lsg1	100	77.685	Periophthalmus_magnuspinnatus
ENSLBEG00000024261	lsg1	99	62.712	ENSPEMG00000012082	-	98	62.853	Peromyscus_maniculatus_bairdii
ENSLBEG00000024261	lsg1	99	60.420	ENSPMAG00000007451	lsg1	98	59.939	Petromyzon_marinus
ENSLBEG00000024261	lsg1	98	66.842	ENSPCIG00000013890	LSG1	80	66.842	Phascolarctos_cinereus
ENSLBEG00000024261	lsg1	97	77.778	ENSPFOG00000021882	lsg1	98	76.886	Poecilia_formosa
ENSLBEG00000024261	lsg1	97	77.134	ENSPLAG00000019536	lsg1	98	76.726	Poecilia_latipinna
ENSLBEG00000024261	lsg1	97	76.886	ENSPMEG00000017281	lsg1	98	76.000	Poecilia_mexicana
ENSLBEG00000024261	lsg1	97	66.083	ENSPREG00000006048	lsg1	98	66.086	Poecilia_reticulata
ENSLBEG00000024261	lsg1	92	61.818	ENSPPYG00000014425	LSG1	98	61.655	Pongo_abelii
ENSLBEG00000024261	lsg1	89	68.000	ENSPCAG00000005511	LSG1	73	70.968	Procavia_capensis
ENSLBEG00000024261	lsg1	100	78.769	ENSPNYG00000021994	lsg1	98	77.865	Pundamilia_nyererei
ENSLBEG00000024261	lsg1	100	74.224	ENSPNAG00000015533	lsg1	98	73.810	Pygocentrus_nattereri
ENSLBEG00000024261	lsg1	100	63.511	ENSRNOG00000001727	Lsg1	98	64.174	Rattus_norvegicus
ENSLBEG00000024261	lsg1	99	62.957	ENSRBIG00000029053	LSG1	98	62.364	Rhinopithecus_bieti
ENSLBEG00000024261	lsg1	99	63.318	ENSRROG00000037702	LSG1	98	62.364	Rhinopithecus_roxellana
ENSLBEG00000024261	lsg1	82	41.829	YGL099W	LSG1	71	44.191	Saccharomyces_cerevisiae
ENSLBEG00000024261	lsg1	99	63.526	ENSSBOG00000034938	LSG1	98	63.566	Saimiri_boliviensis_boliviensis
ENSLBEG00000024261	lsg1	76	60.845	ENSSHAG00000003487	LSG1	99	60.845	Sarcophilus_harrisii
ENSLBEG00000024261	lsg1	98	71.314	ENSSFOG00015008955	lsg1	98	70.353	Scleropages_formosus
ENSLBEG00000024261	lsg1	98	82.222	ENSSDUG00000004622	lsg1	98	82.222	Seriola_dumerili
ENSLBEG00000024261	lsg1	98	84.202	ENSSLDG00000010869	lsg1	98	84.202	Seriola_lalandi_dorsalis
ENSLBEG00000024261	lsg1	86	64.620	ENSSARG00000012981	LSG1	72	71.044	Sorex_araneus
ENSLBEG00000024261	lsg1	100	64.024	ENSSPUG00000016347	LSG1	98	63.551	Sphenodon_punctatus
ENSLBEG00000024261	lsg1	100	80.713	ENSSPAG00000005508	lsg1	99	80.132	Stegastes_partitus
ENSLBEG00000024261	lsg1	100	62.481	ENSSSCG00000011827	LSG1	98	62.342	Sus_scrofa
ENSLBEG00000024261	lsg1	88	59.832	ENSTGUG00000009068	LSG1	100	59.496	Taeniopygia_guttata
ENSLBEG00000024261	lsg1	97	76.623	ENSTRUG00000017380	lsg1	98	76.575	Takifugu_rubripes
ENSLBEG00000024261	lsg1	97	79.417	ENSTNIG00000015570	lsg1	98	80.354	Tetraodon_nigroviridis
ENSLBEG00000024261	lsg1	90	71.186	ENSTTRG00000000559	LSG1	89	71.186	Tursiops_truncatus
ENSLBEG00000024261	lsg1	100	61.631	ENSUAMG00000012454	LSG1	98	62.384	Ursus_americanus
ENSLBEG00000024261	lsg1	100	61.631	ENSUMAG00000000855	LSG1	98	62.384	Ursus_maritimus
ENSLBEG00000024261	lsg1	95	59.680	ENSVPAG00000012400	LSG1	100	59.360	Vicugna_pacos
ENSLBEG00000024261	lsg1	95	63.462	ENSVVUG00000008956	LSG1	98	63.027	Vulpes_vulpes
ENSLBEG00000024261	lsg1	100	65.948	ENSXETG00000003451	lsg1	98	66.399	Xenopus_tropicalis
ENSLBEG00000024261	lsg1	97	77.419	ENSXCOG00000003239	lsg1	98	76.244	Xiphophorus_couchianus
ENSLBEG00000024261	lsg1	97	77.905	ENSXMAG00000005536	lsg1	98	76.998	Xiphophorus_maculatus