EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000024418 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 3140 bases
Position: chrFKLU01001371.1:20399-23538
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000032449	RRM_1	PF00076.22	3e-13	1	1
ENSLBEP00000032437	RRM_1	PF00076.22	4.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000033883	-	1200	-	ENSLBEP00000032437	399 (aa)	-	-
ENSLBET00000033896	-	906	-	ENSLBEP00000032449	301 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000024418's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000024418's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000024418	-	95	40.924	ENSLBEG00000012873	-	77	48.971
ENSLBEG00000024418	-	99	93.624	ENSLBEG00000006979	-	99	93.624
ENSLBEG00000024418	-	86	73.004	ENSLBEG00000006193	-	87	73.171
ENSLBEG00000024418	-	93	46.309	ENSLBEG00000011011	-	73	54.585
ENSLBEG00000024418	-	72	50.909	ENSLBEG00000022656	raly	82	50.431

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000024418	-	74	53.070	ENSG00000184672	RALYL	93	75.949	Homo_sapiens
ENSLBEG00000024418	-	99	79.070	ENSAPOG00000006963	hnrnpc	96	81.311	Acanthochromis_polyacanthus
ENSLBEG00000024418	-	86	73.384	ENSACIG00000016568	-	99	68.978	Amphilophus_citrinellus
ENSLBEG00000024418	-	100	80.392	ENSACIG00000000270	-	100	82.353	Amphilophus_citrinellus
ENSLBEG00000024418	-	93	69.474	ENSAOCG00000021616	-	91	70.395	Amphiprion_ocellaris
ENSLBEG00000024418	-	99	79.070	ENSAOCG00000003896	-	96	81.311	Amphiprion_ocellaris
ENSLBEG00000024418	-	94	69.550	ENSAPEG00000019962	-	94	70.066	Amphiprion_percula
ENSLBEG00000024418	-	99	79.070	ENSAPEG00000001489	-	96	81.311	Amphiprion_percula
ENSLBEG00000024418	-	86	72.830	ENSATEG00000018006	-	86	73.868	Anabas_testudineus
ENSLBEG00000024418	-	92	80.427	ENSATEG00000011734	-	92	82.562	Anabas_testudineus
ENSLBEG00000024418	-	74	50.435	ENSAPLG00000015574	RALYL	78	51.046	Anas_platyrhynchos
ENSLBEG00000024418	-	74	49.130	ENSACAG00000028464	RALYL	77	49.794	Anolis_carolinensis
ENSLBEG00000024418	-	74	52.174	ENSANAG00000023383	RALYL	76	51.515	Aotus_nancymaae
ENSLBEG00000024418	-	99	77.152	ENSACLG00000000995	-	95	75.241	Astatotilapia_calliptera
ENSLBEG00000024418	-	99	76.159	ENSACLG00000013636	-	90	81.071	Astatotilapia_calliptera
ENSLBEG00000024418	-	87	71.269	ENSACLG00000005707	-	95	72.852	Astatotilapia_calliptera
ENSLBEG00000024418	-	72	67.580	ENSAMXG00000042946	hnrnpc	97	69.154	Astyanax_mexicanus
ENSLBEG00000024418	-	86	72.973	ENSAMXG00000034915	zgc:55733	93	72.302	Astyanax_mexicanus
ENSLBEG00000024418	-	74	52.609	ENSCJAG00000000402	RALYL	76	51.948	Callithrix_jacchus
ENSLBEG00000024418	-	86	47.761	ENSCPOG00000012314	RALYL	77	51.261	Cavia_porcellus
ENSLBEG00000024418	-	89	48.214	ENSCCAG00000025003	RALYL	77	75.949	Cebus_capucinus
ENSLBEG00000024418	-	74	53.070	ENSCATG00000042145	RALYL	76	51.948	Cercocebus_atys
ENSLBEG00000024418	-	74	51.528	ENSCLAG00000005228	RALYL	77	51.261	Chinchilla_lanigera
ENSLBEG00000024418	-	72	50.667	ENSCHOG00000013228	RALYL	75	48.498	Choloepus_hoffmanni
ENSLBEG00000024418	-	74	53.070	ENSCANG00000039144	RALYL	76	51.948	Colobus_angolensis_palliatus
ENSLBEG00000024418	-	74	50.870	ENSCGRG00001009241	Ralyl	77	51.046	Cricetulus_griseus_chok1gshd
ENSLBEG00000024418	-	85	68.462	ENSCSEG00000021349	-	86	69.965	Cynoglossus_semilaevis
ENSLBEG00000024418	-	74	72.646	ENSCSEG00000019769	-	74	73.543	Cynoglossus_semilaevis
ENSLBEG00000024418	-	91	66.548	ENSCVAG00000002797	-	92	66.192	Cyprinodon_variegatus
ENSLBEG00000024418	-	84	76.448	ENSCVAG00000016981	-	93	67.398	Cyprinodon_variegatus
ENSLBEG00000024418	-	77	77.155	ENSDARG00000103845	zgc:55733	97	69.565	Danio_rerio
ENSLBEG00000024418	-	80	71.951	ENSDARG00000053810	hnrnpc	87	69.896	Danio_rerio
ENSLBEG00000024418	-	98	44.918	ENSDORG00000003721	Ralyl	77	51.046	Dipodomys_ordii
ENSLBEG00000024418	-	57	54.335	ENSETEG00000014028	RALYL	92	53.191	Echinops_telfairi
ENSLBEG00000024418	-	96	39.423	ENSEBUG00000012363	hnrnpc	69	43.265	Eptatretus_burgeri
ENSLBEG00000024418	-	94	43.253	ENSEBUG00000006049	RALYL	95	42.254	Eptatretus_burgeri
ENSLBEG00000024418	-	76	50.633	ENSEEUG00000007202	RALYL	80	50.820	Erinaceus_europaeus
ENSLBEG00000024418	-	79	71.595	ENSELUG00000007714	-	100	69.307	Esox_lucius
ENSLBEG00000024418	-	84	75.486	ENSELUG00000004132	-	94	73.171	Esox_lucius
ENSLBEG00000024418	-	72	53.778	ENSFALG00000008647	RALYL	97	53.097	Ficedula_albicollis
ENSLBEG00000024418	-	86	71.841	ENSFHEG00000007278	-	99	67.062	Fundulus_heteroclitus
ENSLBEG00000024418	-	91	75.540	ENSFHEG00000003605	-	90	77.305	Fundulus_heteroclitus
ENSLBEG00000024418	-	74	52.174	ENSGALG00000036938	RALYL	77	51.464	Gallus_gallus
ENSLBEG00000024418	-	99	68.750	ENSGAFG00000020992	-	99	71.296	Gambusia_affinis
ENSLBEG00000024418	-	91	76.259	ENSGAFG00000020486	-	89	76.241	Gambusia_affinis
ENSLBEG00000024418	-	74	73.333	ENSGACG00000018932	-	89	73.160	Gasterosteus_aculeatus
ENSLBEG00000024418	-	90	71.841	ENSGACG00000017772	-	99	72.263	Gasterosteus_aculeatus
ENSLBEG00000024418	-	74	53.070	ENSGGOG00000000841	RALYL	76	51.948	Gorilla_gorilla
ENSLBEG00000024418	-	99	77.483	ENSHBUG00000018342	-	95	75.563	Haplochromis_burtoni
ENSLBEG00000024418	-	86	72.453	ENSHBUG00000010527	-	88	72.852	Haplochromis_burtoni
ENSLBEG00000024418	-	74	51.092	ENSHGLG00000004866	RALYL	77	50.840	Heterocephalus_glaber_female
ENSLBEG00000024418	-	74	51.092	ENSHGLG00100017480	RALYL	77	50.840	Heterocephalus_glaber_male
ENSLBEG00000024418	-	94	62.207	ENSHCOG00000012333	hnrnpc	96	66.340	Hippocampus_comes
ENSLBEG00000024418	-	86	71.429	ENSIPUG00000008666	zgc:55733	94	77.679	Ictalurus_punctatus
ENSLBEG00000024418	-	85	71.264	ENSIPUG00000011271	hnrnpc	97	74.786	Ictalurus_punctatus
ENSLBEG00000024418	-	74	50.870	ENSSTOG00000012583	RALYL	79	50.628	Ictidomys_tridecemlineatus
ENSLBEG00000024418	-	91	77.778	ENSKMAG00000011170	-	88	79.570	Kryptolebias_marmoratus
ENSLBEG00000024418	-	84	72.308	ENSKMAG00000018265	-	87	72.664	Kryptolebias_marmoratus
ENSLBEG00000024418	-	86	65.789	ENSLOCG00000002560	hnrnpc	95	66.202	Lepisosteus_oculatus
ENSLBEG00000024418	-	74	53.070	ENSMNEG00000033288	RALYL	76	51.948	Macaca_nemestrina
ENSLBEG00000024418	-	74	53.070	ENSMLEG00000038284	RALYL	76	51.948	Mandrillus_leucophaeus
ENSLBEG00000024418	-	86	72.624	ENSMAMG00000008033	-	98	73.220	Mastacembelus_armatus
ENSLBEG00000024418	-	99	79.139	ENSMAMG00000012236	-	100	78.033	Mastacembelus_armatus
ENSLBEG00000024418	-	99	77.152	ENSMZEG00005020460	-	95	75.241	Maylandia_zebra
ENSLBEG00000024418	-	86	72.075	ENSMZEG00005024249	-	89	72.852	Maylandia_zebra
ENSLBEG00000024418	-	74	50.870	ENSMAUG00000015149	Ralyl	77	51.046	Mesocricetus_auratus
ENSLBEG00000024418	-	74	51.965	ENSMICG00000005558	RALYL	80	75.949	Microcebus_murinus
ENSLBEG00000024418	-	74	50.870	ENSMOCG00000017371	Ralyl	77	51.046	Microtus_ochrogaster
ENSLBEG00000024418	-	86	83.077	ENSMMOG00000021465	-	94	83.154	Mola_mola
ENSLBEG00000024418	-	84	71.595	ENSMMOG00000019520	-	98	67.509	Mola_mola
ENSLBEG00000024418	-	86	75.096	ENSMALG00000014623	-	87	74.386	Monopterus_albus
ENSLBEG00000024418	-	86	70.270	ENSMALG00000007520	-	91	73.665	Monopterus_albus
ENSLBEG00000024418	-	74	50.435	ENSMUSG00000039717	Ralyl	93	74.684	Mus_musculus
ENSLBEG00000024418	-	74	50.847	ENSMPUG00000010724	RALYL	77	48.560	Mustela_putorius_furo
ENSLBEG00000024418	-	74	50.870	ENSNGAG00000013375	Ralyl	77	51.046	Nannospalax_galili
ENSLBEG00000024418	-	99	62.783	ENSNBRG00000015676	-	95	67.616	Neolamprologus_brichardi
ENSLBEG00000024418	-	100	79.479	ENSNBRG00000004912	-	90	81.206	Neolamprologus_brichardi
ENSLBEG00000024418	-	74	53.070	ENSNLEG00000002702	RALYL	73	51.948	Nomascus_leucogenys
ENSLBEG00000024418	-	61	47.396	ENSOPRG00000013650	-	98	45.000	Ochotona_princeps
ENSLBEG00000024418	-	76	50.847	ENSODEG00000001012	RALYL	79	51.029	Octodon_degus
ENSLBEG00000024418	-	99	75.000	ENSONIG00000007859	-	96	80.000	Oreochromis_niloticus
ENSLBEG00000024418	-	86	72.453	ENSONIG00000018350	-	87	73.103	Oreochromis_niloticus
ENSLBEG00000024418	-	84	71.765	ENSORLG00000009999	-	89	70.714	Oryzias_latipes
ENSLBEG00000024418	-	84	71.536	ENSORLG00000003144	-	93	70.717	Oryzias_latipes
ENSLBEG00000024418	-	84	71.765	ENSORLG00020018228	hnrnpc	89	70.714	Oryzias_latipes_hni
ENSLBEG00000024418	-	84	71.536	ENSORLG00015009460	-	85	72.881	Oryzias_latipes_hsok
ENSLBEG00000024418	-	84	71.765	ENSORLG00015019755	-	89	70.714	Oryzias_latipes_hsok
ENSLBEG00000024418	-	84	72.157	ENSOMEG00000020488	-	88	72.043	Oryzias_melastigma
ENSLBEG00000024418	-	84	74.231	ENSOMEG00000022665	-	87	75.087	Oryzias_melastigma
ENSLBEG00000024418	-	74	53.070	ENSPPAG00000038705	RALYL	76	51.948	Pan_paniscus
ENSLBEG00000024418	-	74	53.247	ENSPPRG00000018612	RALYL	77	51.502	Panthera_pardus
ENSLBEG00000024418	-	74	53.247	ENSPTIG00000020331	RALYL	77	51.502	Panthera_tigris_altaica
ENSLBEG00000024418	-	74	53.070	ENSPTRG00000020381	RALYL	76	51.948	Pan_troglodytes
ENSLBEG00000024418	-	74	53.070	ENSPANG00000029305	RALYL	76	51.948	Papio_anubis
ENSLBEG00000024418	-	92	69.416	ENSPKIG00000008592	-	88	72.165	Paramormyrops_kingsleyae
ENSLBEG00000024418	-	78	76.763	ENSPKIG00000022837	-	96	73.101	Paramormyrops_kingsleyae
ENSLBEG00000024418	-	74	50.435	ENSPSIG00000011135	RALYL	77	51.046	Pelodiscus_sinensis
ENSLBEG00000024418	-	98	61.074	ENSPMGG00000017774	-	94	61.702	Periophthalmus_magnuspinnatus
ENSLBEG00000024418	-	75	79.736	ENSPMGG00000013144	-	83	79.204	Periophthalmus_magnuspinnatus
ENSLBEG00000024418	-	74	50.870	ENSPEMG00000016447	Ralyl	77	51.046	Peromyscus_maniculatus_bairdii
ENSLBEG00000024418	-	72	48.739	ENSPMAG00000002407	RALYL	97	50.638	Petromyzon_marinus
ENSLBEG00000024418	-	91	75.972	ENSPFOG00000001583	-	89	77.032	Poecilia_formosa
ENSLBEG00000024418	-	98	66.026	ENSPFOG00000002643	-	96	70.679	Poecilia_formosa
ENSLBEG00000024418	-	91	75.177	ENSPLAG00000015305	-	89	76.241	Poecilia_latipinna
ENSLBEG00000024418	-	84	72.868	ENSPLAG00000000061	-	96	70.679	Poecilia_latipinna
ENSLBEG00000024418	-	91	76.241	ENSPMEG00000004802	-	89	76.950	Poecilia_mexicana
ENSLBEG00000024418	-	84	72.868	ENSPMEG00000016524	-	96	70.370	Poecilia_mexicana
ENSLBEG00000024418	-	85	75.285	ENSPREG00000007928	-	89	76.241	Poecilia_reticulata
ENSLBEG00000024418	-	84	72.093	ENSPREG00000001852	-	94	72.014	Poecilia_reticulata
ENSLBEG00000024418	-	74	45.946	ENSPPYG00000018710	-	67	70.192	Pongo_abelii
ENSLBEG00000024418	-	76	49.576	ENSPVAG00000010821	RALYL	79	49.794	Pteropus_vampyrus
ENSLBEG00000024418	-	86	78.927	ENSPNYG00000020293	-	92	80.714	Pundamilia_nyererei
ENSLBEG00000024418	-	94	70.242	ENSPNYG00000003747	-	95	72.203	Pundamilia_nyererei
ENSLBEG00000024418	-	85	69.549	ENSPNAG00000019200	zgc:55733	88	67.361	Pygocentrus_nattereri
ENSLBEG00000024418	-	81	73.984	ENSPNAG00000015686	hnrnpc	91	73.498	Pygocentrus_nattereri
ENSLBEG00000024418	-	74	53.070	ENSRROG00000023925	RALYL	82	74.074	Rhinopithecus_roxellana
ENSLBEG00000024418	-	86	68.284	ENSSFOG00015012015	-	98	67.626	Scleropages_formosus
ENSLBEG00000024418	-	85	72.761	ENSSFOG00015012924	-	80	94.937	Scleropages_formosus
ENSLBEG00000024418	-	99	61.056	ENSSMAG00000011147	-	98	68.459	Scophthalmus_maximus
ENSLBEG00000024418	-	85	75.781	ENSSMAG00000013592	-	87	78.571	Scophthalmus_maximus
ENSLBEG00000024418	-	99	81.063	ENSSDUG00000001723	-	96	81.967	Seriola_dumerili
ENSLBEG00000024418	-	86	73.282	ENSSDUG00000006730	-	87	74.737	Seriola_dumerili
ENSLBEG00000024418	-	89	80.515	ENSSLDG00000007454	-	88	82.014	Seriola_lalandi_dorsalis
ENSLBEG00000024418	-	87	72.453	ENSSLDG00000007474	-	96	73.702	Seriola_lalandi_dorsalis
ENSLBEG00000024418	-	99	79.734	ENSSPAG00000023204	-	96	81.967	Stegastes_partitus
ENSLBEG00000024418	-	86	73.004	ENSSPAG00000013996	-	88	73.103	Stegastes_partitus
ENSLBEG00000024418	-	74	50.431	ENSTGUG00000011689	RALYL	79	51.464	Taeniopygia_guttata
ENSLBEG00000024418	-	86	79.151	ENSTRUG00000020158	-	90	78.014	Takifugu_rubripes
ENSLBEG00000024418	-	96	64.726	ENSTNIG00000000334	-	99	69.675	Tetraodon_nigroviridis
ENSLBEG00000024418	-	86	74.340	ENSTNIG00000007427	-	95	73.026	Tetraodon_nigroviridis
ENSLBEG00000024418	-	77	44.583	ENSTBEG00000005551	RALYL	89	44.856	Tupaia_belangeri
ENSLBEG00000024418	-	76	46.610	ENSTTRG00000015762	RALYL	79	47.899	Tursiops_truncatus
ENSLBEG00000024418	-	74	47.162	ENSVPAG00000008501	RALYL	77	47.414	Vicugna_pacos
ENSLBEG00000024418	-	89	71.942	ENSXCOG00000006552	-	86	72.727	Xiphophorus_couchianus
ENSLBEG00000024418	-	54	77.457	ENSXCOG00000019434	-	78	77.720	Xiphophorus_couchianus
ENSLBEG00000024418	-	84	72.481	ENSXMAG00000022849	-	91	73.038	Xiphophorus_maculatus
ENSLBEG00000024418	-	91	75.180	ENSXMAG00000009333	-	89	76.596	Xiphophorus_maculatus