EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000024451 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 3517 bases
Position: chrFKLU01000409.1:339434-342950
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000032423	zf-C2H2	PF00096.26	2e-15	1	3
ENSLBEP00000032423	zf-C2H2	PF00096.26	2e-15	2	3
ENSLBEP00000032423	zf-C2H2	PF00096.26	2e-15	3	3
ENSLBEP00000032423	zf-met	PF12874.7	2.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000033869	-	2293	-	ENSLBEP00000032423	481 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000024451's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000024451's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000024451	-	50	34.188	ENSLBEG00000010278	-	94	32.065
ENSLBEG00000024451	-	52	44.068	ENSLBEG00000011006	-	58	44.068
ENSLBEG00000024451	-	50	36.905	ENSLBEG00000001756	-	91	36.905
ENSLBEG00000024451	-	54	31.373	ENSLBEG00000013570	-	95	31.250
ENSLBEG00000024451	-	54	32.447	ENSLBEG00000022736	prdm5	71	32.447
ENSLBEG00000024451	-	52	30.901	ENSLBEG00000011028	-	78	30.901
ENSLBEG00000024451	-	53	31.915	ENSLBEG00000005715	-	70	31.915
ENSLBEG00000024451	-	51	32.143	ENSLBEG00000000369	-	99	32.143
ENSLBEG00000024451	-	50	38.971	ENSLBEG00000011091	si:cabz01071911.3	94	38.971

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000024451	-	55	36.090	ENSMAMG00000023492	-	58	36.090	Mastacembelus_armatus