EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000024457 (Gene tree)
Gene ID: 109987447
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 11016 bases
Position: chrFKLU01000117.1:1239526-1250541
Accession: 109987447
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000032462	POP1	PF06978.11	8.3e-36	1	2
ENSLBEP00000032462	POP1	PF06978.11	8.3e-36	2	2
ENSLBEP00000032462	POPLD	PF08170.12	6.4e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000033910	POP1-201	2799	XM_020638523	ENSLBEP00000032462	932 (aa)	XP_020494179	-

Gene Model

Click here to download ENSLBEG00000024457's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000024457's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000024457	POP1	95	47.780	ENSG00000104356	POP1	89	48.488	Homo_sapiens
ENSLBEG00000024457	POP1	100	68.934	ENSAPOG00000008198	pop1	100	69.340	Acanthochromis_polyacanthus
ENSLBEG00000024457	POP1	95	47.152	ENSAMEG00000000556	POP1	89	47.532	Ailuropoda_melanoleuca
ENSLBEG00000024457	POP1	100	68.130	ENSACIG00000004169	POP1	100	68.130	Amphilophus_citrinellus
ENSLBEG00000024457	POP1	100	69.106	ENSAOCG00000010991	pop1	100	69.614	Amphiprion_ocellaris
ENSLBEG00000024457	POP1	100	68.187	ENSAPEG00000007607	pop1	100	68.497	Amphiprion_percula
ENSLBEG00000024457	POP1	100	68.432	ENSATEG00000024814	POP1	100	68.737	Anabas_testudineus
ENSLBEG00000024457	POP1	95	47.919	ENSAPLG00000014418	POP1	97	48.096	Anas_platyrhynchos
ENSLBEG00000024457	POP1	93	47.803	ENSACAG00000016083	POP1	100	45.270	Anolis_carolinensis
ENSLBEG00000024457	POP1	88	50.307	ENSANAG00000026360	POP1	100	50.307	Aotus_nancymaae
ENSLBEG00000024457	POP1	100	65.156	ENSACLG00000010951	pop1	100	66.093	Astatotilapia_calliptera
ENSLBEG00000024457	POP1	100	52.584	ENSAMXG00000014483	POP1	100	52.584	Astyanax_mexicanus
ENSLBEG00000024457	POP1	89	54.386	ENSBTAG00000012596	POP1	81	54.844	Bos_taurus
ENSLBEG00000024457	POP1	100	45.862	ENSCJAG00000015567	POP1	100	46.064	Callithrix_jacchus
ENSLBEG00000024457	POP1	95	49.231	ENSCAFG00000000469	POP1	89	49.552	Canis_familiaris
ENSLBEG00000024457	POP1	95	47.619	ENSCAFG00020026765	POP1	89	47.789	Canis_lupus_dingo
ENSLBEG00000024457	POP1	89	54.777	ENSCHIG00000017066	POP1	81	55.246	Capra_hircus
ENSLBEG00000024457	POP1	90	54.777	ENSTSYG00000003097	POP1	80	55.337	Carlito_syrichta
ENSLBEG00000024457	POP1	95	46.822	ENSCAPG00000007251	POP1	89	46.760	Cavia_aperea
ENSLBEG00000024457	POP1	95	48.243	ENSCPOG00000002901	POP1	89	48.426	Cavia_porcellus
ENSLBEG00000024457	POP1	100	46.237	ENSCCAG00000018939	POP1	100	46.237	Cebus_capucinus
ENSLBEG00000024457	POP1	100	45.149	ENSCATG00000040916	POP1	89	47.737	Cercocebus_atys
ENSLBEG00000024457	POP1	95	48.026	ENSCLAG00000007208	POP1	86	48.205	Chinchilla_lanigera
ENSLBEG00000024457	POP1	95	47.619	ENSCSAG00000012340	POP1	98	47.845	Chlorocebus_sabaeus
ENSLBEG00000024457	POP1	95	45.648	ENSCHOG00000011432	POP1	93	45.622	Choloepus_hoffmanni
ENSLBEG00000024457	POP1	95	50.596	ENSCPBG00000006373	POP1	88	50.829	Chrysemys_picta_bellii
ENSLBEG00000024457	POP1	95	49.723	ENSCANG00000001647	POP1	80	54.351	Colobus_angolensis_palliatus
ENSLBEG00000024457	POP1	93	47.802	ENSCGRG00001017308	Pop1	89	48.026	Cricetulus_griseus_chok1gshd
ENSLBEG00000024457	POP1	100	43.129	ENSCGRG00000010824	Pop1	100	43.487	Cricetulus_griseus_crigri
ENSLBEG00000024457	POP1	100	64.279	ENSCSEG00000008737	POP1	100	64.480	Cynoglossus_semilaevis
ENSLBEG00000024457	POP1	100	65.373	ENSCVAG00000022248	pop1	100	65.884	Cyprinodon_variegatus
ENSLBEG00000024457	POP1	52	50.207	ENSDARG00000102087	pop1	99	50.207	Danio_rerio
ENSLBEG00000024457	POP1	95	44.867	ENSDNOG00000019974	POP1	89	45.084	Dasypus_novemcinctus
ENSLBEG00000024457	POP1	95	42.173	ENSDORG00000015384	Pop1	88	42.733	Dipodomys_ordii
ENSLBEG00000024457	POP1	82	47.010	ENSETEG00000007839	POP1	77	47.323	Echinops_telfairi
ENSLBEG00000024457	POP1	100	45.393	ENSEASG00005003189	POP1	88	48.043	Equus_asinus_asinus
ENSLBEG00000024457	POP1	100	45.648	ENSECAG00000024236	POP1	89	48.370	Equus_caballus
ENSLBEG00000024457	POP1	52	73.684	ENSEEUG00000003050	-	54	73.684	Erinaceus_europaeus
ENSLBEG00000024457	POP1	100	58.274	ENSELUG00000003526	pop1	100	58.883	Esox_lucius
ENSLBEG00000024457	POP1	95	48.879	ENSFCAG00000002168	POP1	89	49.075	Felis_catus
ENSLBEG00000024457	POP1	93	47.845	ENSFALG00000005711	POP1	89	47.448	Ficedula_albicollis
ENSLBEG00000024457	POP1	95	47.396	ENSFDAG00000017068	POP1	89	47.784	Fukomys_damarensis
ENSLBEG00000024457	POP1	100	65.879	ENSFHEG00000019518	pop1	100	65.982	Fundulus_heteroclitus
ENSLBEG00000024457	POP1	100	59.049	ENSGMOG00000000659	POP1	100	59.049	Gadus_morhua
ENSLBEG00000024457	POP1	100	64.271	ENSGAFG00000019770	POP1	100	64.271	Gambusia_affinis
ENSLBEG00000024457	POP1	93	66.381	ENSGACG00000003499	pop1	89	66.702	Gasterosteus_aculeatus
ENSLBEG00000024457	POP1	95	49.677	ENSGAGG00000011737	POP1	87	49.890	Gopherus_agassizii
ENSLBEG00000024457	POP1	95	47.886	ENSGGOG00000003176	POP1	89	48.596	Gorilla_gorilla
ENSLBEG00000024457	POP1	100	65.222	ENSHBUG00000021583	pop1	100	65.524	Haplochromis_burtoni
ENSLBEG00000024457	POP1	93	47.784	ENSHGLG00000006029	POP1	89	48.164	Heterocephalus_glaber_female
ENSLBEG00000024457	POP1	93	47.784	ENSHGLG00100016879	POP1	89	48.164	Heterocephalus_glaber_male
ENSLBEG00000024457	POP1	100	61.602	ENSHCOG00000013888	pop1	100	61.270	Hippocampus_comes
ENSLBEG00000024457	POP1	100	52.569	ENSIPUG00000018336	pop1	100	52.569	Ictalurus_punctatus
ENSLBEG00000024457	POP1	100	45.516	ENSSTOG00000011455	POP1	86	47.996	Ictidomys_tridecemlineatus
ENSLBEG00000024457	POP1	95	46.937	ENSJJAG00000013325	Pop1	88	47.098	Jaculus_jaculus
ENSLBEG00000024457	POP1	100	66.084	ENSKMAG00000001346	POP1	100	66.598	Kryptolebias_marmoratus
ENSLBEG00000024457	POP1	95	49.009	ENSLACG00000012498	POP1	95	49.309	Latimeria_chalumnae
ENSLBEG00000024457	POP1	100	51.714	ENSLOCG00000009817	POP1	100	51.812	Lepisosteus_oculatus
ENSLBEG00000024457	POP1	95	48.346	ENSLAFG00000010770	POP1	89	48.807	Loxodonta_africana
ENSLBEG00000024457	POP1	100	45.183	ENSMFAG00000000347	POP1	89	47.676	Macaca_fascicularis
ENSLBEG00000024457	POP1	100	45.183	ENSMNEG00000036870	POP1	89	47.676	Macaca_nemestrina
ENSLBEG00000024457	POP1	100	45.279	ENSMLEG00000034986	POP1	89	47.784	Mandrillus_leucophaeus
ENSLBEG00000024457	POP1	100	69.098	ENSMAMG00000004040	pop1	100	69.786	Mastacembelus_armatus
ENSLBEG00000024457	POP1	100	65.789	ENSMZEG00005025448	pop1	100	66.093	Maylandia_zebra
ENSLBEG00000024457	POP1	91	52.147	ENSMGAG00000012167	POP1	83	52.194	Meleagris_gallopavo
ENSLBEG00000024457	POP1	95	48.180	ENSMAUG00000017537	Pop1	89	48.253	Mesocricetus_auratus
ENSLBEG00000024457	POP1	95	47.730	ENSMICG00000004361	POP1	89	47.793	Microcebus_murinus
ENSLBEG00000024457	POP1	95	47.481	ENSMOCG00000006356	Pop1	89	47.546	Microtus_ochrogaster
ENSLBEG00000024457	POP1	100	66.134	ENSMMOG00000018242	pop1	100	66.347	Mola_mola
ENSLBEG00000024457	POP1	90	54.327	ENSMODG00000006561	POP1	80	54.590	Monodelphis_domestica
ENSLBEG00000024457	POP1	100	67.683	ENSMALG00000012621	POP1	100	67.683	Monopterus_albus
ENSLBEG00000024457	POP1	95	45.869	MGP_CAROLIEiJ_G0019726	Pop1	89	46.278	Mus_caroli
ENSLBEG00000024457	POP1	95	46.186	ENSMUSG00000022325	Pop1	89	46.602	Mus_musculus
ENSLBEG00000024457	POP1	95	46.517	MGP_PahariEiJ_G0019735	Pop1	89	46.667	Mus_pahari
ENSLBEG00000024457	POP1	95	46.334	MGP_SPRETEiJ_G0020622	Pop1	89	46.753	Mus_spretus
ENSLBEG00000024457	POP1	95	48.517	ENSMPUG00000015250	POP1	89	48.704	Mustela_putorius_furo
ENSLBEG00000024457	POP1	95	45.464	ENSMLUG00000010204	POP1	89	45.591	Myotis_lucifugus
ENSLBEG00000024457	POP1	91	53.016	ENSNGAG00000001582	Pop1	81	53.431	Nannospalax_galili
ENSLBEG00000024457	POP1	100	65.550	ENSNBRG00000002356	pop1	100	64.921	Neolamprologus_brichardi
ENSLBEG00000024457	POP1	100	45.533	ENSNLEG00000002541	POP1	100	45.873	Nomascus_leucogenys
ENSLBEG00000024457	POP1	85	49.459	ENSMEUG00000003118	POP1	78	54.341	Notamacropus_eugenii
ENSLBEG00000024457	POP1	100	45.525	ENSOPRG00000007667	POP1	100	45.525	Ochotona_princeps
ENSLBEG00000024457	POP1	88	53.846	ENSODEG00000003984	POP1	81	53.846	Octodon_degus
ENSLBEG00000024457	POP1	100	66.062	ENSONIG00000016445	pop1	100	66.667	Oreochromis_niloticus
ENSLBEG00000024457	POP1	54	53.623	ENSOANG00000001278	-	78	58.824	Ornithorhynchus_anatinus
ENSLBEG00000024457	POP1	92	53.110	ENSOCUG00000017400	POP1	81	53.530	Oryctolagus_cuniculus
ENSLBEG00000024457	POP1	100	64.596	ENSORLG00000002839	pop1	100	64.823	Oryzias_latipes
ENSLBEG00000024457	POP1	100	64.025	ENSORLG00020022450	POP1	100	63.504	Oryzias_latipes_hni
ENSLBEG00000024457	POP1	100	64.736	ENSORLG00015012746	POP1	100	65.047	Oryzias_latipes_hsok
ENSLBEG00000024457	POP1	100	63.316	ENSOMEG00000006915	pop1	99	63.392	Oryzias_melastigma
ENSLBEG00000024457	POP1	95	46.947	ENSOGAG00000001466	POP1	89	48.004	Otolemur_garnettii
ENSLBEG00000024457	POP1	95	47.780	ENSPPAG00000018410	POP1	89	48.488	Pan_paniscus
ENSLBEG00000024457	POP1	95	48.674	ENSPPRG00000005002	POP1	89	48.969	Panthera_pardus
ENSLBEG00000024457	POP1	95	48.827	ENSPTIG00000016527	POP1	89	49.022	Panthera_tigris_altaica
ENSLBEG00000024457	POP1	95	47.992	ENSPTRG00000020458	POP1	89	48.704	Pan_troglodytes
ENSLBEG00000024457	POP1	100	45.279	ENSPANG00000009704	POP1	89	47.784	Papio_anubis
ENSLBEG00000024457	POP1	100	54.894	ENSPKIG00000016325	POP1	100	55.197	Paramormyrops_kingsleyae
ENSLBEG00000024457	POP1	95	49.085	ENSPSIG00000012343	POP1	88	49.616	Pelodiscus_sinensis
ENSLBEG00000024457	POP1	100	62.140	ENSPMGG00000022253	POP1	100	62.140	Periophthalmus_magnuspinnatus
ENSLBEG00000024457	POP1	95	46.466	ENSPEMG00000023633	Pop1	89	46.652	Peromyscus_maniculatus_bairdii
ENSLBEG00000024457	POP1	94	42.630	ENSPMAG00000003209	POP1	99	42.353	Petromyzon_marinus
ENSLBEG00000024457	POP1	94	46.341	ENSPCIG00000012216	POP1	88	46.494	Phascolarctos_cinereus
ENSLBEG00000024457	POP1	100	64.000	ENSPFOG00000012490	POP1	100	64.205	Poecilia_formosa
ENSLBEG00000024457	POP1	100	64.066	ENSPLAG00000004646	POP1	100	64.271	Poecilia_latipinna
ENSLBEG00000024457	POP1	100	64.139	ENSPMEG00000019592	POP1	100	64.344	Poecilia_mexicana
ENSLBEG00000024457	POP1	100	64.139	ENSPREG00000020951	POP1	100	64.242	Poecilia_reticulata
ENSLBEG00000024457	POP1	95	47.463	ENSPPYG00000018777	POP1	89	48.164	Pongo_abelii
ENSLBEG00000024457	POP1	95	46.055	ENSPCAG00000016662	POP1	89	46.196	Procavia_capensis
ENSLBEG00000024457	POP1	95	47.674	ENSPCOG00000019420	POP1	89	47.845	Propithecus_coquereli
ENSLBEG00000024457	POP1	100	45.578	ENSPVAG00000014468	POP1	100	45.490	Pteropus_vampyrus
ENSLBEG00000024457	POP1	100	66.247	ENSPNYG00000004476	pop1	100	66.247	Pundamilia_nyererei
ENSLBEG00000024457	POP1	100	53.724	ENSPNAG00000000265	pop1	100	53.724	Pygocentrus_nattereri
ENSLBEG00000024457	POP1	95	46.588	ENSRNOG00000005243	Pop1	89	46.739	Rattus_norvegicus
ENSLBEG00000024457	POP1	100	45.053	ENSRBIG00000007996	POP1	89	47.629	Rhinopithecus_bieti
ENSLBEG00000024457	POP1	100	45.053	ENSRROG00000012334	POP1	89	47.629	Rhinopithecus_roxellana
ENSLBEG00000024457	POP1	95	47.558	ENSSBOG00000020830	POP1	90	47.727	Saimiri_boliviensis_boliviensis
ENSLBEG00000024457	POP1	94	46.779	ENSSHAG00000000296	POP1	88	46.838	Sarcophilus_harrisii
ENSLBEG00000024457	POP1	100	56.504	ENSSFOG00015007429	pop1	99	56.504	Scleropages_formosus
ENSLBEG00000024457	POP1	100	68.947	ENSSMAG00000010467	POP1	100	69.703	Scophthalmus_maximus
ENSLBEG00000024457	POP1	100	68.813	ENSSDUG00000007817	POP1	100	69.526	Seriola_dumerili
ENSLBEG00000024457	POP1	100	68.813	ENSSLDG00000012565	POP1	100	69.657	Seriola_lalandi_dorsalis
ENSLBEG00000024457	POP1	95	45.989	ENSSPUG00000003550	-	89	46.238	Sphenodon_punctatus
ENSLBEG00000024457	POP1	100	69.886	ENSSPAG00000014955	pop1	100	69.055	Stegastes_partitus
ENSLBEG00000024457	POP1	100	46.056	ENSSSCG00000006078	POP1	100	46.056	Sus_scrofa
ENSLBEG00000024457	POP1	93	44.312	ENSTGUG00000012011	-	97	44.105	Taeniopygia_guttata
ENSLBEG00000024457	POP1	100	67.432	ENSTRUG00000010856	pop1	100	67.119	Takifugu_rubripes
ENSLBEG00000024457	POP1	94	66.992	ENSTNIG00000013297	pop1	95	67.470	Tetraodon_nigroviridis
ENSLBEG00000024457	POP1	95	45.090	ENSTBEG00000014214	POP1	93	45.318	Tupaia_belangeri
ENSLBEG00000024457	POP1	95	46.261	ENSTTRG00000016071	POP1	89	46.652	Tursiops_truncatus
ENSLBEG00000024457	POP1	95	47.385	ENSUAMG00000017309	POP1	93	47.774	Ursus_americanus
ENSLBEG00000024457	POP1	85	64.238	ENSUMAG00000016952	POP1	88	67.669	Ursus_maritimus
ENSLBEG00000024457	POP1	80	60.674	ENSVPAG00000008278	POP1	71	63.125	Vicugna_pacos
ENSLBEG00000024457	POP1	95	47.513	ENSVVUG00000010994	POP1	89	47.789	Vulpes_vulpes
ENSLBEG00000024457	POP1	100	56.650	ENSXCOG00000017043	POP1	100	57.563	Xiphophorus_couchianus
ENSLBEG00000024457	POP1	100	63.292	ENSXMAG00000002472	POP1	100	63.701	Xiphophorus_maculatus