EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000024500 (Gene tree)
Gene ID: 109984064
Gene Symbol: prpf38b
Alias: wu:fc43b05|zgc:63496
Full Name: pre-mRNA processing factor 38B
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 8012 bases
Position: chrFKLU01000064.1:714180-722191
Accession: 109984064
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000032543	PRP38	PF03371.15	5.5e-54	1	1
ENSLBEP00000032551	PRP38	PF03371.15	6e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000034006	-	555	-	ENSLBEP00000032551	184 (aa)	-	-
ENSLBET00000033997	-	1419	XM_020634075	ENSLBEP00000032543	472 (aa)	XP_020489731	-

Gene Model

Click here to download ENSLBEG00000024500's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000024500's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000024500	prpf38b	89	95.122	ENSAPOG00000005297	prpf38b	100	86.354	Acanthochromis_polyacanthus
ENSLBEG00000024500	prpf38b	89	95.122	ENSAPOG00000012791	-	100	86.354	Acanthochromis_polyacanthus
ENSLBEG00000024500	prpf38b	89	96.341	ENSAOCG00000012675	prpf38b	92	85.775	Amphiprion_ocellaris
ENSLBEG00000024500	prpf38b	94	96.532	ENSAPEG00000010974	prpf38b	99	96.532	Amphiprion_percula
ENSLBEG00000024500	prpf38b	89	94.512	ENSACLG00000001712	prpf38b	98	87.118	Astatotilapia_calliptera
ENSLBEG00000024500	prpf38b	90	89.091	ENSDARG00000053101	prpf38b	96	89.091	Danio_rerio
ENSLBEG00000024500	prpf38b	89	93.902	ENSFHEG00000002861	prpf38b	100	81.585	Fundulus_heteroclitus
ENSLBEG00000024500	prpf38b	89	98.171	ENSGACG00000015154	prpf38b	100	85.474	Gasterosteus_aculeatus
ENSLBEG00000024500	prpf38b	89	94.512	ENSHBUG00000022496	prpf38b	98	87.336	Haplochromis_burtoni
ENSLBEG00000024500	prpf38b	88	91.925	ENSIPUG00000014942	prpf38b	98	62.128	Ictalurus_punctatus
ENSLBEG00000024500	prpf38b	100	94.086	ENSMAMG00000010641	prpf38b	98	94.086	Mastacembelus_armatus
ENSLBEG00000024500	prpf38b	89	94.512	ENSMZEG00005025536	prpf38b	98	87.118	Maylandia_zebra
ENSLBEG00000024500	prpf38b	89	94.512	ENSPNYG00000007625	prpf38b	98	87.336	Pundamilia_nyererei
ENSLBEG00000024500	prpf38b	99	88.889	ENSSPAG00000023160	-	100	88.248	Stegastes_partitus