EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000024871 (Gene tree)
Gene ID: 109984476
Gene Symbol: ptcd2
Alias: zgc:112401
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 5632 bases
Position: chrFKLU01000071.1:762451-768082
Accession: 109984476
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000033011	MRP-S27	PF10037.9	3.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000034475	-	3067	XM_020634654	ENSLBEP00000033011	390 (aa)	XP_020490310	-

Gene Model

Click here to download ENSLBEG00000024871's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000024871's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000024871	ptcd2	88	45.954	ENSG00000049883	PTCD2	100	43.842	Homo_sapiens
ENSLBEG00000024871	ptcd2	98	69.816	ENSAPOG00000020682	ptcd2	100	69.816	Acanthochromis_polyacanthus
ENSLBEG00000024871	ptcd2	88	46.686	ENSAMEG00000007194	PTCD2	89	46.686	Ailuropoda_melanoleuca
ENSLBEG00000024871	ptcd2	88	66.667	ENSACIG00000002053	ptcd2	100	66.667	Amphilophus_citrinellus
ENSLBEG00000024871	ptcd2	99	71.392	ENSAOCG00000006616	ptcd2	100	71.392	Amphiprion_ocellaris
ENSLBEG00000024871	ptcd2	99	71.392	ENSAPEG00000022926	ptcd2	100	71.392	Amphiprion_percula
ENSLBEG00000024871	ptcd2	99	47.837	ENSACAG00000009747	PTCD2	100	47.837	Anolis_carolinensis
ENSLBEG00000024871	ptcd2	94	43.501	ENSANAG00000029353	PTCD2	97	43.501	Aotus_nancymaae
ENSLBEG00000024871	ptcd2	99	72.165	ENSACLG00000027742	ptcd2	100	72.165	Astatotilapia_calliptera
ENSLBEG00000024871	ptcd2	97	50.649	ENSAMXG00000029404	ptcd2	99	50.649	Astyanax_mexicanus
ENSLBEG00000024871	ptcd2	88	47.110	ENSBTAG00000014675	PTCD2	90	47.110	Bos_taurus
ENSLBEG00000024871	ptcd2	94	43.767	ENSCJAG00000016364	PTCD2	97	43.767	Callithrix_jacchus
ENSLBEG00000024871	ptcd2	95	46.982	ENSCAFG00000007982	PTCD2	89	46.982	Canis_familiaris
ENSLBEG00000024871	ptcd2	89	48.711	ENSCAFG00020019147	PTCD2	98	48.711	Canis_lupus_dingo
ENSLBEG00000024871	ptcd2	88	47.110	ENSCHIG00000017118	PTCD2	90	47.110	Capra_hircus
ENSLBEG00000024871	ptcd2	99	43.188	ENSCPOG00000040168	PTCD2	99	43.188	Cavia_porcellus
ENSLBEG00000024871	ptcd2	73	45.000	ENSCCAG00000021996	-	92	45.000	Cebus_capucinus
ENSLBEG00000024871	ptcd2	92	44.000	ENSCCAG00000029389	-	97	44.000	Cebus_capucinus
ENSLBEG00000024871	ptcd2	95	45.455	ENSCATG00000019069	PTCD2	98	45.455	Cercocebus_atys
ENSLBEG00000024871	ptcd2	99	43.702	ENSCLAG00000000072	PTCD2	99	43.702	Chinchilla_lanigera
ENSLBEG00000024871	ptcd2	88	47.110	ENSCSAG00000015623	PTCD2	98	45.600	Chlorocebus_sabaeus
ENSLBEG00000024871	ptcd2	71	48.235	ENSCHOG00000010634	PTCD2	79	48.235	Choloepus_hoffmanni
ENSLBEG00000024871	ptcd2	88	48.555	ENSCPBG00000000216	PTCD2	89	48.555	Chrysemys_picta_bellii
ENSLBEG00000024871	ptcd2	98	45.337	ENSCANG00000035636	PTCD2	99	45.337	Colobus_angolensis_palliatus
ENSLBEG00000024871	ptcd2	94	47.978	ENSCGRG00001015289	Ptcd2	81	47.978	Cricetulus_griseus_chok1gshd
ENSLBEG00000024871	ptcd2	94	47.978	ENSCGRG00000006193	Ptcd2	81	47.978	Cricetulus_griseus_crigri
ENSLBEG00000024871	ptcd2	99	65.641	ENSCVAG00000001285	ptcd2	100	65.641	Cyprinodon_variegatus
ENSLBEG00000024871	ptcd2	98	50.392	ENSDARG00000035391	ptcd2	100	50.392	Danio_rerio
ENSLBEG00000024871	ptcd2	88	47.110	ENSDNOG00000008719	PTCD2	90	47.110	Dasypus_novemcinctus
ENSLBEG00000024871	ptcd2	95	46.032	ENSDORG00000004921	Ptcd2	98	46.032	Dipodomys_ordii
ENSLBEG00000024871	ptcd2	88	43.516	ENSETEG00000016542	PTCD2	89	43.516	Echinops_telfairi
ENSLBEG00000024871	ptcd2	95	45.067	ENSEASG00005018038	PTCD2	98	45.067	Equus_asinus_asinus
ENSLBEG00000024871	ptcd2	98	45.103	ENSECAG00000007022	PTCD2	99	45.103	Equus_caballus
ENSLBEG00000024871	ptcd2	98	44.359	ENSEEUG00000014031	PTCD2	99	44.359	Erinaceus_europaeus
ENSLBEG00000024871	ptcd2	98	61.097	ENSELUG00000003584	ptcd2	100	61.097	Esox_lucius
ENSLBEG00000024871	ptcd2	81	48.101	ENSFCAG00000045432	PTCD2	74	48.101	Felis_catus
ENSLBEG00000024871	ptcd2	84	44.037	ENSFALG00000010299	PTCD2	99	44.037	Ficedula_albicollis
ENSLBEG00000024871	ptcd2	88	45.087	ENSFDAG00000018461	PTCD2	90	45.087	Fukomys_damarensis
ENSLBEG00000024871	ptcd2	97	61.097	ENSGMOG00000003637	ptcd2	99	61.097	Gadus_morhua
ENSLBEG00000024871	ptcd2	91	45.763	ENSGALG00000038260	PTCD2	99	43.799	Gallus_gallus
ENSLBEG00000024871	ptcd2	99	47.355	ENSGAGG00000021952	PTCD2	100	47.355	Gopherus_agassizii
ENSLBEG00000024871	ptcd2	88	45.954	ENSGGOG00000010695	PTCD2	89	45.954	Gorilla_gorilla
ENSLBEG00000024871	ptcd2	99	72.165	ENSHBUG00000009191	ptcd2	100	72.165	Haplochromis_burtoni
ENSLBEG00000024871	ptcd2	88	46.821	ENSHGLG00000001234	PTCD2	90	46.821	Heterocephalus_glaber_female
ENSLBEG00000024871	ptcd2	88	46.821	ENSHGLG00100015419	PTCD2	90	46.821	Heterocephalus_glaber_male
ENSLBEG00000024871	ptcd2	96	61.376	ENSHCOG00000001703	ptcd2	98	61.376	Hippocampus_comes
ENSLBEG00000024871	ptcd2	91	55.710	ENSIPUG00000006080	ptcd2	99	54.450	Ictalurus_punctatus
ENSLBEG00000024871	ptcd2	88	45.533	ENSSTOG00000006596	PTCD2	91	45.533	Ictidomys_tridecemlineatus
ENSLBEG00000024871	ptcd2	91	47.222	ENSJJAG00000024388	Ptcd2	94	47.222	Jaculus_jaculus
ENSLBEG00000024871	ptcd2	93	57.967	ENSKMAG00000009329	ptcd2	96	57.967	Kryptolebias_marmoratus
ENSLBEG00000024871	ptcd2	98	52.865	ENSLOCG00000011122	ptcd2	100	52.865	Lepisosteus_oculatus
ENSLBEG00000024871	ptcd2	70	51.648	ENSLAFG00000004115	PTCD2	93	50.000	Loxodonta_africana
ENSLBEG00000024871	ptcd2	98	45.736	ENSMFAG00000031516	PTCD2	99	45.736	Macaca_fascicularis
ENSLBEG00000024871	ptcd2	95	45.867	ENSMNEG00000007537	PTCD2	98	45.867	Macaca_nemestrina
ENSLBEG00000024871	ptcd2	98	44.961	ENSMLEG00000031093	PTCD2	99	44.961	Mandrillus_leucophaeus
ENSLBEG00000024871	ptcd2	98	71.129	ENSMAMG00000018529	ptcd2	100	71.129	Mastacembelus_armatus
ENSLBEG00000024871	ptcd2	99	72.165	ENSMZEG00005003625	ptcd2	100	72.165	Maylandia_zebra
ENSLBEG00000024871	ptcd2	89	46.552	ENSMGAG00000005033	PTCD2	100	46.552	Meleagris_gallopavo
ENSLBEG00000024871	ptcd2	50	51.531	ENSMAUG00000020253	Ptcd2	97	36.290	Mesocricetus_auratus
ENSLBEG00000024871	ptcd2	94	45.358	ENSMICG00000004535	PTCD2	97	45.358	Microcebus_murinus
ENSLBEG00000024871	ptcd2	94	45.553	ENSMOCG00000019985	Ptcd2	97	45.553	Microtus_ochrogaster
ENSLBEG00000024871	ptcd2	90	45.892	ENSMODG00000001695	PTCD2	91	45.892	Monodelphis_domestica
ENSLBEG00000024871	ptcd2	98	70.341	ENSMALG00000022372	ptcd2	100	70.341	Monopterus_albus
ENSLBEG00000024871	ptcd2	94	44.504	MGP_CAROLIEiJ_G0018829	Ptcd2	97	44.504	Mus_caroli
ENSLBEG00000024871	ptcd2	94	43.700	ENSMUSG00000021650	Ptcd2	97	43.700	Mus_musculus
ENSLBEG00000024871	ptcd2	94	45.576	MGP_PahariEiJ_G0015904	Ptcd2	97	45.576	Mus_pahari
ENSLBEG00000024871	ptcd2	94	44.504	MGP_SPRETEiJ_G0019711	Ptcd2	97	44.504	Mus_spretus
ENSLBEG00000024871	ptcd2	88	47.262	ENSMPUG00000014401	PTCD2	90	47.262	Mustela_putorius_furo
ENSLBEG00000024871	ptcd2	88	45.087	ENSMLUG00000007374	PTCD2	91	44.633	Myotis_lucifugus
ENSLBEG00000024871	ptcd2	97	42.298	ENSNGAG00000005027	Ptcd2	98	42.298	Nannospalax_galili
ENSLBEG00000024871	ptcd2	84	68.997	ENSNBRG00000000092	-	100	68.997	Neolamprologus_brichardi
ENSLBEG00000024871	ptcd2	98	71.391	ENSNBRG00000008174	ptcd2	100	71.391	Neolamprologus_brichardi
ENSLBEG00000024871	ptcd2	88	45.376	ENSNLEG00000004516	PTCD2	89	45.376	Nomascus_leucogenys
ENSLBEG00000024871	ptcd2	88	46.821	ENSOPRG00000007290	PTCD2	89	46.821	Ochotona_princeps
ENSLBEG00000024871	ptcd2	95	45.308	ENSODEG00000016417	PTCD2	95	45.308	Octodon_degus
ENSLBEG00000024871	ptcd2	86	72.156	ENSONIG00000011269	ptcd2	98	72.156	Oreochromis_niloticus
ENSLBEG00000024871	ptcd2	88	46.821	ENSOCUG00000007970	PTCD2	100	44.792	Oryctolagus_cuniculus
ENSLBEG00000024871	ptcd2	99	65.128	ENSORLG00000003851	ptcd2	100	65.128	Oryzias_latipes
ENSLBEG00000024871	ptcd2	95	65.054	ENSORLG00020009823	ptcd2	97	65.054	Oryzias_latipes_hni
ENSLBEG00000024871	ptcd2	89	65.896	ENSORLG00015016777	ptcd2	99	65.896	Oryzias_latipes_hsok
ENSLBEG00000024871	ptcd2	99	66.154	ENSOMEG00000012396	ptcd2	95	66.154	Oryzias_melastigma
ENSLBEG00000024871	ptcd2	88	47.688	ENSOGAG00000008390	PTCD2	89	47.688	Otolemur_garnettii
ENSLBEG00000024871	ptcd2	88	47.399	ENSOARG00000005087	PTCD2	89	47.399	Ovis_aries
ENSLBEG00000024871	ptcd2	88	45.954	ENSPPAG00000028480	PTCD2	89	45.954	Pan_paniscus
ENSLBEG00000024871	ptcd2	88	45.665	ENSPTRG00000016968	PTCD2	89	45.665	Pan_troglodytes
ENSLBEG00000024871	ptcd2	88	47.536	ENSPANG00000006611	PTCD2	89	47.536	Papio_anubis
ENSLBEG00000024871	ptcd2	98	52.865	ENSPKIG00000019896	ptcd2	100	52.865	Paramormyrops_kingsleyae
ENSLBEG00000024871	ptcd2	77	51.815	ENSPSIG00000014559	PTCD2	94	51.815	Pelodiscus_sinensis
ENSLBEG00000024871	ptcd2	94	45.576	ENSPEMG00000000884	Ptcd2	97	45.576	Peromyscus_maniculatus_bairdii
ENSLBEG00000024871	ptcd2	96	44.652	ENSPCIG00000029047	PTCD2	92	44.652	Phascolarctos_cinereus
ENSLBEG00000024871	ptcd2	98	65.625	ENSPLAG00000010456	ptcd2	99	65.625	Poecilia_latipinna
ENSLBEG00000024871	ptcd2	98	65.365	ENSPREG00000021797	ptcd2	97	65.365	Poecilia_reticulata
ENSLBEG00000024871	ptcd2	88	39.884	ENSPPYG00000015543	PTCD2	88	39.884	Pongo_abelii
ENSLBEG00000024871	ptcd2	70	42.647	ENSPCAG00000006806	PTCD2	87	42.647	Procavia_capensis
ENSLBEG00000024871	ptcd2	91	44.199	ENSPVAG00000010935	PTCD2	93	44.199	Pteropus_vampyrus
ENSLBEG00000024871	ptcd2	99	71.907	ENSPNYG00000003122	ptcd2	100	71.907	Pundamilia_nyererei
ENSLBEG00000024871	ptcd2	98	59.896	ENSPNAG00000021490	ptcd2	100	59.896	Pygocentrus_nattereri
ENSLBEG00000024871	ptcd2	94	44.772	ENSRNOG00000028403	Ptcd2	97	44.772	Rattus_norvegicus
ENSLBEG00000024871	ptcd2	95	42.513	ENSRBIG00000032929	PTCD2	96	42.513	Rhinopithecus_bieti
ENSLBEG00000024871	ptcd2	88	47.110	ENSRROG00000000080	PTCD2	90	47.110	Rhinopithecus_roxellana
ENSLBEG00000024871	ptcd2	94	43.501	ENSSBOG00000018911	PTCD2	98	43.501	Saimiri_boliviensis_boliviensis
ENSLBEG00000024871	ptcd2	96	44.000	ENSSHAG00000003833	PTCD2	91	44.000	Sarcophilus_harrisii
ENSLBEG00000024871	ptcd2	98	54.427	ENSSFOG00015015415	ptcd2	100	54.427	Scleropages_formosus
ENSLBEG00000024871	ptcd2	98	62.338	ENSSMAG00000010350	ptcd2	100	62.338	Scophthalmus_maximus
ENSLBEG00000024871	ptcd2	99	71.392	ENSSDUG00000008142	ptcd2	97	71.392	Seriola_dumerili
ENSLBEG00000024871	ptcd2	98	70.866	ENSSLDG00000015284	ptcd2	100	70.866	Seriola_lalandi_dorsalis
ENSLBEG00000024871	ptcd2	72	40.141	ENSSARG00000004983	PTCD2	91	40.141	Sorex_araneus
ENSLBEG00000024871	ptcd2	88	45.376	ENSSPUG00000000176	PTCD2	87	45.376	Sphenodon_punctatus
ENSLBEG00000024871	ptcd2	99	65.544	ENSSPAG00000008591	ptcd2	99	65.544	Stegastes_partitus
ENSLBEG00000024871	ptcd2	92	44.904	ENSSSCG00000016975	PTCD2	85	44.904	Sus_scrofa
ENSLBEG00000024871	ptcd2	88	45.665	ENSTGUG00000005705	PTCD2	100	45.665	Taeniopygia_guttata
ENSLBEG00000024871	ptcd2	94	43.501	ENSTBEG00000016559	PTCD2	97	43.501	Tupaia_belangeri
ENSLBEG00000024871	ptcd2	88	47.399	ENSTTRG00000011851	PTCD2	89	47.399	Tursiops_truncatus
ENSLBEG00000024871	ptcd2	88	46.686	ENSUAMG00000007583	PTCD2	81	46.686	Ursus_americanus
ENSLBEG00000024871	ptcd2	93	45.355	ENSUMAG00000007666	PTCD2	95	45.355	Ursus_maritimus
ENSLBEG00000024871	ptcd2	88	44.798	ENSVPAG00000009597	PTCD2	89	44.798	Vicugna_pacos
ENSLBEG00000024871	ptcd2	88	49.280	ENSVVUG00000007299	-	98	47.340	Vulpes_vulpes
ENSLBEG00000024871	ptcd2	98	46.114	ENSXETG00000031652	PTCD2	100	46.114	Xenopus_tropicalis
ENSLBEG00000024871	ptcd2	100	64.286	ENSXMAG00000005940	ptcd2	93	64.286	Xiphophorus_maculatus