EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000024901 (Gene tree)
Gene ID: 109993922
Gene Symbol: rnpc3
Alias: caliban|clbn|zgc:136847
Full Name: RNA binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 20804 bases
Position: chrFKLU01000273.1:237812-258615
Accession: 109993922
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000033049	RRM_1	PF00076.22	2.1e-16	1	2
ENSLBEP00000033049	RRM_1	PF00076.22	2.1e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000034513	-	3850	XM_020647076	ENSLBEP00000033049	517 (aa)	XP_020502732	UPI0009B4E1BA

Gene Model

Click here to download ENSLBEG00000024901's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000024901's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000024901	rnpc3	95	56.225	ENSG00000185946	RNPC3	96	55.639	Homo_sapiens
ENSLBEG00000024901	rnpc3	98	83.826	ENSAPOG00000017371	rnpc3	100	83.826	Acanthochromis_polyacanthus
ENSLBEG00000024901	rnpc3	95	55.090	ENSAMEG00000001694	RNPC3	95	55.090	Ailuropoda_melanoleuca
ENSLBEG00000024901	rnpc3	97	76.471	ENSACIG00000021043	rnpc3	99	76.667	Amphilophus_citrinellus
ENSLBEG00000024901	rnpc3	99	83.689	ENSAOCG00000014052	rnpc3	99	83.689	Amphiprion_ocellaris
ENSLBEG00000024901	rnpc3	99	83.689	ENSAPEG00000008739	rnpc3	99	83.689	Amphiprion_percula
ENSLBEG00000024901	rnpc3	98	79.845	ENSATEG00000021263	rnpc3	100	79.845	Anabas_testudineus
ENSLBEG00000024901	rnpc3	87	56.044	ENSAPLG00000015605	RNPC3	99	56.044	Anas_platyrhynchos
ENSLBEG00000024901	rnpc3	94	54.825	ENSACAG00000002029	RNPC3	96	53.507	Anolis_carolinensis
ENSLBEG00000024901	rnpc3	95	55.888	ENSANAG00000019950	RNPC3	95	55.578	Aotus_nancymaae
ENSLBEG00000024901	rnpc3	97	82.178	ENSACLG00000014702	rnpc3	99	82.178	Astatotilapia_calliptera
ENSLBEG00000024901	rnpc3	98	64.706	ENSAMXG00000033372	rnpc3	52	69.403	Astyanax_mexicanus
ENSLBEG00000024901	rnpc3	95	56.200	ENSBTAG00000019091	RNPC3	95	56.200	Bos_taurus
ENSLBEG00000024901	rnpc3	95	55.511	ENSCJAG00000035686	RNPC3	95	55.200	Callithrix_jacchus
ENSLBEG00000024901	rnpc3	95	55.040	ENSCAFG00000019972	RNPC3	95	55.040	Canis_familiaris
ENSLBEG00000024901	rnpc3	95	55.040	ENSCAFG00020011300	RNPC3	95	55.040	Canis_lupus_dingo
ENSLBEG00000024901	rnpc3	95	56.574	ENSCHIG00000020361	RNPC3	95	55.976	Capra_hircus
ENSLBEG00000024901	rnpc3	95	54.637	ENSTSYG00000030256	RNPC3	95	54.637	Carlito_syrichta
ENSLBEG00000024901	rnpc3	84	46.364	ENSCAPG00000013600	RNPC3	97	46.313	Cavia_aperea
ENSLBEG00000024901	rnpc3	95	55.040	ENSCPOG00000031638	RNPC3	95	55.040	Cavia_porcellus
ENSLBEG00000024901	rnpc3	95	55.912	ENSCCAG00000024301	RNPC3	95	55.600	Cebus_capucinus
ENSLBEG00000024901	rnpc3	95	56.112	ENSCATG00000002086	RNPC3	95	55.800	Cercocebus_atys
ENSLBEG00000024901	rnpc3	98	42.633	ENSCATG00000035930	-	52	50.410	Cercocebus_atys
ENSLBEG00000024901	rnpc3	95	52.539	ENSCLAG00000005169	RNPC3	95	53.521	Chinchilla_lanigera
ENSLBEG00000024901	rnpc3	95	56.112	ENSCSAG00000001519	RNPC3	95	56.112	Chlorocebus_sabaeus
ENSLBEG00000024901	rnpc3	95	57.916	ENSCPBG00000028311	RNPC3	95	58.317	Chrysemys_picta_bellii
ENSLBEG00000024901	rnpc3	60	53.488	ENSCSAVG00000002800	-	76	53.488	Ciona_savignyi
ENSLBEG00000024901	rnpc3	95	55.444	ENSCANG00000031444	RNPC3	95	55.444	Colobus_angolensis_palliatus
ENSLBEG00000024901	rnpc3	95	55.578	ENSCGRG00001019276	Rnpc3	95	55.578	Cricetulus_griseus_chok1gshd
ENSLBEG00000024901	rnpc3	87	53.187	ENSCGRG00000000053	Rnpc3	99	53.187	Cricetulus_griseus_crigri
ENSLBEG00000024901	rnpc3	97	74.400	ENSCSEG00000013475	rnpc3	98	74.400	Cynoglossus_semilaevis
ENSLBEG00000024901	rnpc3	98	79.377	ENSCVAG00000002645	rnpc3	100	79.377	Cyprinodon_variegatus
ENSLBEG00000024901	rnpc3	98	64.118	ENSDARG00000011247	rnpc3	99	64.706	Danio_rerio
ENSLBEG00000024901	rnpc3	95	55.600	ENSDNOG00000047498	-	95	55.600	Dasypus_novemcinctus
ENSLBEG00000024901	rnpc3	95	55.400	ENSDNOG00000044555	-	95	55.400	Dasypus_novemcinctus
ENSLBEG00000024901	rnpc3	95	54.600	ENSDORG00000027343	Rnpc3	95	54.600	Dipodomys_ordii
ENSLBEG00000024901	rnpc3	94	51.976	ENSEBUG00000002068	rnpc3	96	51.683	Eptatretus_burgeri
ENSLBEG00000024901	rnpc3	95	56.539	ENSEASG00005015957	RNPC3	95	56.539	Equus_asinus_asinus
ENSLBEG00000024901	rnpc3	95	56.513	ENSECAG00000021148	RNPC3	95	56.513	Equus_caballus
ENSLBEG00000024901	rnpc3	97	67.625	ENSELUG00000002264	rnpc3	99	65.134	Esox_lucius
ENSLBEG00000024901	rnpc3	95	55.289	ENSFCAG00000024312	RNPC3	95	55.289	Felis_catus
ENSLBEG00000024901	rnpc3	87	56.484	ENSFALG00000002580	RNPC3	99	57.143	Ficedula_albicollis
ENSLBEG00000024901	rnpc3	95	54.637	ENSFDAG00000019948	RNPC3	95	54.637	Fukomys_damarensis
ENSLBEG00000024901	rnpc3	98	72.244	ENSFHEG00000020647	rnpc3	100	72.638	Fundulus_heteroclitus
ENSLBEG00000024901	rnpc3	99	69.515	ENSGMOG00000019213	rnpc3	99	69.455	Gadus_morhua
ENSLBEG00000024901	rnpc3	98	77.255	ENSGAFG00000017236	rnpc3	100	77.255	Gambusia_affinis
ENSLBEG00000024901	rnpc3	99	81.765	ENSGACG00000002048	rnpc3	100	81.783	Gasterosteus_aculeatus
ENSLBEG00000024901	rnpc3	95	58.350	ENSGAGG00000008438	RNPC3	94	58.753	Gopherus_agassizii
ENSLBEG00000024901	rnpc3	95	48.687	ENSGGOG00000026201	-	95	48.687	Gorilla_gorilla
ENSLBEG00000024901	rnpc3	81	81.250	ENSHBUG00000015966	rnpc3	85	81.250	Haplochromis_burtoni
ENSLBEG00000024901	rnpc3	95	54.032	ENSHGLG00000001708	RNPC3	95	54.032	Heterocephalus_glaber_female
ENSLBEG00000024901	rnpc3	95	54.032	ENSHGLG00100003005	RNPC3	95	54.032	Heterocephalus_glaber_male
ENSLBEG00000024901	rnpc3	98	75.296	ENSHCOG00000017135	rnpc3	100	75.296	Hippocampus_comes
ENSLBEG00000024901	rnpc3	98	63.333	ENSIPUG00000002916	rnpc3	99	63.529	Ictalurus_punctatus
ENSLBEG00000024901	rnpc3	95	54.618	ENSSTOG00000025020	RNPC3	95	54.618	Ictidomys_tridecemlineatus
ENSLBEG00000024901	rnpc3	95	55.193	ENSJJAG00000010203	Rnpc3	96	54.949	Jaculus_jaculus
ENSLBEG00000024901	rnpc3	97	78.373	ENSKMAG00000017358	rnpc3	99	78.373	Kryptolebias_marmoratus
ENSLBEG00000024901	rnpc3	97	58.090	ENSLACG00000005720	RNPC3	92	55.273	Latimeria_chalumnae
ENSLBEG00000024901	rnpc3	97	64.215	ENSLOCG00000007986	rnpc3	98	60.636	Lepisosteus_oculatus
ENSLBEG00000024901	rnpc3	95	56.513	ENSLAFG00000032342	RNPC3	95	56.513	Loxodonta_africana
ENSLBEG00000024901	rnpc3	95	56.112	ENSMFAG00000002004	RNPC3	95	55.800	Macaca_fascicularis
ENSLBEG00000024901	rnpc3	98	41.602	ENSMFAG00000002917	-	54	50.407	Macaca_fascicularis
ENSLBEG00000024901	rnpc3	95	55.912	ENSMMUG00000018039	RNPC3	95	55.600	Macaca_mulatta
ENSLBEG00000024901	rnpc3	81	53.704	ENSMMUG00000002098	-	89	53.704	Macaca_mulatta
ENSLBEG00000024901	rnpc3	95	53.106	ENSMNEG00000033950	RNPC3	95	52.800	Macaca_nemestrina
ENSLBEG00000024901	rnpc3	95	42.460	ENSMLEG00000034644	-	95	43.340	Mandrillus_leucophaeus
ENSLBEG00000024901	rnpc3	95	56.112	ENSMLEG00000033628	RNPC3	95	55.800	Mandrillus_leucophaeus
ENSLBEG00000024901	rnpc3	98	72.603	ENSMAMG00000007496	rnpc3	100	72.603	Mastacembelus_armatus
ENSLBEG00000024901	rnpc3	97	81.092	ENSMZEG00005020233	rnpc3	99	81.092	Maylandia_zebra
ENSLBEG00000024901	rnpc3	87	56.264	ENSMGAG00000006381	RNPC3	99	56.264	Meleagris_gallopavo
ENSLBEG00000024901	rnpc3	95	56.073	ENSMAUG00000001358	Rnpc3	95	56.073	Mesocricetus_auratus
ENSLBEG00000024901	rnpc3	95	54.800	ENSMICG00000029591	RNPC3	95	54.800	Microcebus_murinus
ENSLBEG00000024901	rnpc3	95	55.758	ENSMOCG00000013423	Rnpc3	95	55.758	Microtus_ochrogaster
ENSLBEG00000024901	rnpc3	98	74.213	ENSMMOG00000005309	rnpc3	100	70.866	Mola_mola
ENSLBEG00000024901	rnpc3	95	55.242	ENSMODG00000002946	RNPC3	95	55.622	Monodelphis_domestica
ENSLBEG00000024901	rnpc3	96	76.295	ENSMALG00000015471	rnpc3	99	76.295	Monopterus_albus
ENSLBEG00000024901	rnpc3	95	55.758	MGP_CAROLIEiJ_G0025555	Rnpc3	96	55.758	Mus_caroli
ENSLBEG00000024901	rnpc3	95	55.533	ENSMUSG00000027981	Rnpc3	99	53.632	Mus_musculus
ENSLBEG00000024901	rnpc3	95	54.910	MGP_PahariEiJ_G0027001	Rnpc3	97	54.910	Mus_pahari
ENSLBEG00000024901	rnpc3	95	55.533	MGP_SPRETEiJ_G0026505	Rnpc3	96	55.533	Mus_spretus
ENSLBEG00000024901	rnpc3	95	55.311	ENSMPUG00000007349	RNPC3	95	55.311	Mustela_putorius_furo
ENSLBEG00000024901	rnpc3	95	55.668	ENSMLUG00000028743	RNPC3	95	55.668	Myotis_lucifugus
ENSLBEG00000024901	rnpc3	95	55.131	ENSNGAG00000010939	Rnpc3	95	54.800	Nannospalax_galili
ENSLBEG00000024901	rnpc3	97	82.376	ENSNBRG00000012196	rnpc3	96	82.376	Neolamprologus_brichardi
ENSLBEG00000024901	rnpc3	95	56.000	ENSNLEG00000012013	RNPC3	95	55.689	Nomascus_leucogenys
ENSLBEG00000024901	rnpc3	95	56.200	ENSODEG00000007612	RNPC3	95	54.509	Octodon_degus
ENSLBEG00000024901	rnpc3	97	81.854	ENSONIG00000004770	rnpc3	100	82.688	Oreochromis_niloticus
ENSLBEG00000024901	rnpc3	90	56.745	ENSOANG00000008220	RNPC3	99	56.745	Ornithorhynchus_anatinus
ENSLBEG00000024901	rnpc3	95	55.777	ENSOCUG00000004016	RNPC3	95	55.489	Oryctolagus_cuniculus
ENSLBEG00000024901	rnpc3	98	75.686	ENSORLG00000005694	rnpc3	100	75.686	Oryzias_latipes
ENSLBEG00000024901	rnpc3	98	76.726	ENSORLG00020005513	rnpc3	100	76.726	Oryzias_latipes_hni
ENSLBEG00000024901	rnpc3	98	75.490	ENSORLG00015002179	rnpc3	100	75.490	Oryzias_latipes_hsok
ENSLBEG00000024901	rnpc3	98	76.471	ENSOMEG00000017737	rnpc3	100	76.471	Oryzias_melastigma
ENSLBEG00000024901	rnpc3	95	56.452	ENSOGAG00000026182	RNPC3	95	56.452	Otolemur_garnettii
ENSLBEG00000024901	rnpc3	95	56.574	ENSOARG00000018719	RNPC3	95	55.976	Ovis_aries
ENSLBEG00000024901	rnpc3	95	49.293	ENSPPAG00000030278	-	97	49.398	Pan_paniscus
ENSLBEG00000024901	rnpc3	95	55.731	ENSPPAG00000037459	RNPC3	95	55.424	Pan_paniscus
ENSLBEG00000024901	rnpc3	95	55.289	ENSPPRG00000020246	RNPC3	95	55.289	Panthera_pardus
ENSLBEG00000024901	rnpc3	95	55.289	ENSPTIG00000009887	RNPC3	97	55.289	Panthera_tigris_altaica
ENSLBEG00000024901	rnpc3	95	56.112	ENSPTRG00000033902	RNPC3	95	55.800	Pan_troglodytes
ENSLBEG00000024901	rnpc3	95	48.283	ENSPTRG00000044227	-	97	48.283	Pan_troglodytes
ENSLBEG00000024901	rnpc3	95	56.225	ENSPANG00000012137	RNPC3	95	55.912	Papio_anubis
ENSLBEG00000024901	rnpc3	95	45.875	ENSPANG00000029957	-	51	49.593	Papio_anubis
ENSLBEG00000024901	rnpc3	95	65.663	ENSPKIG00000008828	rnpc3	99	64.717	Paramormyrops_kingsleyae
ENSLBEG00000024901	rnpc3	63	54.655	ENSPSIG00000007396	RNPC3	99	55.556	Pelodiscus_sinensis
ENSLBEG00000024901	rnpc3	97	65.354	ENSPMGG00000011742	rnpc3	99	64.567	Periophthalmus_magnuspinnatus
ENSLBEG00000024901	rnpc3	87	53.626	ENSPEMG00000020112	Rnpc3	99	53.626	Peromyscus_maniculatus_bairdii
ENSLBEG00000024901	rnpc3	95	55.847	ENSPCIG00000004415	-	95	55.847	Phascolarctos_cinereus
ENSLBEG00000024901	rnpc3	98	78.978	ENSPFOG00000009895	rnpc3	100	78.978	Poecilia_formosa
ENSLBEG00000024901	rnpc3	98	78.978	ENSPLAG00000012023	rnpc3	100	78.978	Poecilia_latipinna
ENSLBEG00000024901	rnpc3	99	78.682	ENSPMEG00000003663	rnpc3	100	78.978	Poecilia_mexicana
ENSLBEG00000024901	rnpc3	98	78.740	ENSPREG00000010206	rnpc3	100	78.740	Poecilia_reticulata
ENSLBEG00000024901	rnpc3	79	51.675	ENSPPYG00000001102	RNPC3	94	51.313	Pongo_abelii
ENSLBEG00000024901	rnpc3	97	82.178	ENSPNYG00000020603	rnpc3	99	82.178	Pundamilia_nyererei
ENSLBEG00000024901	rnpc3	95	55.556	ENSRNOG00000017310	Rnpc3	95	55.556	Rattus_norvegicus
ENSLBEG00000024901	rnpc3	95	52.174	ENSRBIG00000043897	RNPC3	95	51.874	Rhinopithecus_bieti
ENSLBEG00000024901	rnpc3	95	56.112	ENSRROG00000032334	RNPC3	95	55.800	Rhinopithecus_roxellana
ENSLBEG00000024901	rnpc3	95	56.225	ENSSBOG00000024473	RNPC3	95	55.912	Saimiri_boliviensis_boliviensis
ENSLBEG00000024901	rnpc3	95	55.221	ENSSHAG00000011859	RNPC3	95	55.332	Sarcophilus_harrisii
ENSLBEG00000024901	rnpc3	98	66.342	ENSSFOG00015013055	rnpc3	99	68.421	Scleropages_formosus
ENSLBEG00000024901	rnpc3	98	75.534	ENSSMAG00000020346	rnpc3	100	74.369	Scophthalmus_maximus
ENSLBEG00000024901	rnpc3	98	81.128	ENSSDUG00000006600	rnpc3	100	81.128	Seriola_dumerili
ENSLBEG00000024901	rnpc3	98	81.907	ENSSLDG00000007979	rnpc3	100	81.907	Seriola_lalandi_dorsalis
ENSLBEG00000024901	rnpc3	98	83.629	ENSSPAG00000005633	rnpc3	100	83.432	Stegastes_partitus
ENSLBEG00000024901	rnpc3	95	54.403	ENSSSCG00000037254	RNPC3	95	56.338	Sus_scrofa
ENSLBEG00000024901	rnpc3	87	57.489	ENSTGUG00000004795	-	99	57.489	Taeniopygia_guttata
ENSLBEG00000024901	rnpc3	98	77.362	ENSTNIG00000018963	rnpc3	100	77.362	Tetraodon_nigroviridis
ENSLBEG00000024901	rnpc3	95	55.200	ENSUMAG00000007775	RNPC3	97	55.200	Ursus_maritimus
ENSLBEG00000024901	rnpc3	95	55.040	ENSVVUG00000000331	RNPC3	95	55.040	Vulpes_vulpes
ENSLBEG00000024901	rnpc3	95	44.576	ENSXETG00000025027	rnpc3	96	44.158	Xenopus_tropicalis
ENSLBEG00000024901	rnpc3	52	79.926	ENSXCOG00000005013	rnpc3	100	76.744	Xiphophorus_couchianus
ENSLBEG00000024901	rnpc3	98	77.647	ENSXMAG00000006495	rnpc3	100	77.647	Xiphophorus_maculatus