EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000025016 (Gene tree)
Gene ID: 109997907
Gene Symbol: si:ch73-63e15.2
Alias: si:dkey-19f23.4
Full Name: protein strawberry notch homolog 2-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 43340 bases
Position: chrFKLU01000448.1:130423-173762
Accession: 109997907
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000033355	ResIII	PF04851.15	1.2e-06	1	1
ENSLBEP00000033304	ResIII	PF04851.15	2.9e-06	1	1
ENSLBEP00000033272	ResIII	PF04851.15	3.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000034822	-	2907	-	ENSLBEP00000033355	968 (aa)	-	-
ENSLBET00000034737	-	5399	XM_020652568	ENSLBEP00000033272	1540 (aa)	XP_020508224	-
ENSLBET00000034769	-	5312	-	ENSLBEP00000033304	1511 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000025016's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000025016's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000025016	si:ch73-63e15.2	63	87.902	ENSLBEG00000005937	-	100	90.090
ENSLBEG00000025016	si:ch73-63e15.2	82	63.090	ENSLBEG00000007623	sbno1	70	63.719

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000025016	si:ch73-63e15.2	95	70.386	ENSG00000064932	SBNO2	88	67.811	Homo_sapiens
ENSLBEG00000025016	si:ch73-63e15.2	99	94.264	ENSAPOG00000003185	si:ch73-63e15.2	90	91.746	Acanthochromis_polyacanthus
ENSLBEG00000025016	si:ch73-63e15.2	99	94.048	ENSAOCG00000016581	si:ch73-63e15.2	99	88.690	Amphiprion_ocellaris
ENSLBEG00000025016	si:ch73-63e15.2	99	93.939	ENSAPEG00000008862	si:ch73-63e15.2	100	85.100	Amphiprion_percula
ENSLBEG00000025016	si:ch73-63e15.2	99	90.582	ENSATEG00000023838	si:ch73-63e15.2	99	88.889	Anabas_testudineus
ENSLBEG00000025016	si:ch73-63e15.2	95	73.755	ENSAPLG00000007158	SBNO2	90	72.194	Anas_platyrhynchos
ENSLBEG00000025016	si:ch73-63e15.2	95	69.969	ENSANAG00000026685	SBNO2	89	66.953	Aotus_nancymaae
ENSLBEG00000025016	si:ch73-63e15.2	99	86.892	ENSACLG00000005090	si:ch73-63e15.2	94	77.938	Astatotilapia_calliptera
ENSLBEG00000025016	si:ch73-63e15.2	96	82.185	ENSAMXG00000018868	sbno2a	99	78.600	Astyanax_mexicanus
ENSLBEG00000025016	si:ch73-63e15.2	95	81.489	ENSAMXG00000015881	si:ch73-63e15.2	86	79.362	Astyanax_mexicanus
ENSLBEG00000025016	si:ch73-63e15.2	95	70.052	ENSBTAG00000020780	SBNO2	88	68.166	Bos_taurus
ENSLBEG00000025016	si:ch73-63e15.2	95	70.777	ENSCAFG00000019543	SBNO2	83	68.734	Canis_familiaris
ENSLBEG00000025016	si:ch73-63e15.2	95	70.777	ENSCAFG00020017115	SBNO2	88	68.734	Canis_lupus_dingo
ENSLBEG00000025016	si:ch73-63e15.2	95	69.979	ENSCHIG00000026127	SBNO2	86	68.589	Capra_hircus
ENSLBEG00000025016	si:ch73-63e15.2	94	70.304	ENSCAPG00000005731	SBNO2	94	66.551	Cavia_aperea
ENSLBEG00000025016	si:ch73-63e15.2	94	70.304	ENSCPOG00000007477	SBNO2	87	66.044	Cavia_porcellus
ENSLBEG00000025016	si:ch73-63e15.2	96	69.866	ENSCCAG00000037518	SBNO2	89	67.039	Cebus_capucinus
ENSLBEG00000025016	si:ch73-63e15.2	95	70.521	ENSCATG00000037046	SBNO2	88	67.983	Cercocebus_atys
ENSLBEG00000025016	si:ch73-63e15.2	97	69.601	ENSCLAG00000010178	SBNO2	99	67.888	Chinchilla_lanigera
ENSLBEG00000025016	si:ch73-63e15.2	95	70.343	ENSCSAG00000012317	SBNO2	83	68.150	Chlorocebus_sabaeus
ENSLBEG00000025016	si:ch73-63e15.2	95	75.027	ENSCPBG00000008920	SBNO2	78	84.543	Chrysemys_picta_bellii
ENSLBEG00000025016	si:ch73-63e15.2	95	69.948	ENSCANG00000036745	SBNO2	96	67.652	Colobus_angolensis_palliatus
ENSLBEG00000025016	si:ch73-63e15.2	92	70.518	ENSCGRG00001023960	Sbno2	84	67.162	Cricetulus_griseus_chok1gshd
ENSLBEG00000025016	si:ch73-63e15.2	95	70.355	ENSCGRG00000011984	Sbno2	85	68.412	Cricetulus_griseus_crigri
ENSLBEG00000025016	si:ch73-63e15.2	95	89.020	ENSCSEG00000006856	si:ch73-63e15.2	97	89.755	Cynoglossus_semilaevis
ENSLBEG00000025016	si:ch73-63e15.2	99	86.984	ENSCVAG00000005663	si:ch73-63e15.2	100	75.382	Cyprinodon_variegatus
ENSLBEG00000025016	si:ch73-63e15.2	96	78.342	ENSDARG00000098801	sbno2a	87	78.290	Danio_rerio
ENSLBEG00000025016	si:ch73-63e15.2	95	81.818	ENSDARG00000016188	SBNO2	86	78.713	Danio_rerio
ENSLBEG00000025016	si:ch73-63e15.2	97	69.490	ENSDORG00000002916	Sbno2	84	67.826	Dipodomys_ordii
ENSLBEG00000025016	si:ch73-63e15.2	95	69.552	ENSEASG00005021621	SBNO2	89	68.309	Equus_asinus_asinus
ENSLBEG00000025016	si:ch73-63e15.2	95	69.552	ENSECAG00000011827	SBNO2	89	68.394	Equus_caballus
ENSLBEG00000025016	si:ch73-63e15.2	99	87.421	ENSELUG00000020457	si:ch73-63e15.2	90	82.726	Esox_lucius
ENSLBEG00000025016	si:ch73-63e15.2	98	70.582	ENSFALG00000013988	SBNO2	85	71.963	Ficedula_albicollis
ENSLBEG00000025016	si:ch73-63e15.2	95	67.992	ENSFDAG00000015186	SBNO2	85	66.784	Fukomys_damarensis
ENSLBEG00000025016	si:ch73-63e15.2	99	88.490	ENSFHEG00000022262	si:ch73-63e15.2	100	76.962	Fundulus_heteroclitus
ENSLBEG00000025016	si:ch73-63e15.2	96	86.772	ENSGMOG00000007542	si:ch73-63e15.2	96	87.771	Gadus_morhua
ENSLBEG00000025016	si:ch73-63e15.2	97	72.589	ENSGALG00000037522	SBNO2	86	72.097	Gallus_gallus
ENSLBEG00000025016	si:ch73-63e15.2	99	88.466	ENSGAFG00000004860	si:ch73-63e15.2	93	89.039	Gambusia_affinis
ENSLBEG00000025016	si:ch73-63e15.2	95	89.958	ENSGACG00000013190	si:ch73-63e15.2	95	92.235	Gasterosteus_aculeatus
ENSLBEG00000025016	si:ch73-63e15.2	95	75.290	ENSGAGG00000008348	SBNO2	93	69.376	Gopherus_agassizii
ENSLBEG00000025016	si:ch73-63e15.2	99	86.667	ENSHBUG00000010742	si:ch73-63e15.2	99	77.849	Haplochromis_burtoni
ENSLBEG00000025016	si:ch73-63e15.2	95	70.502	ENSHGLG00000008739	SBNO2	84	68.330	Heterocephalus_glaber_female
ENSLBEG00000025016	si:ch73-63e15.2	95	70.502	ENSHGLG00100005269	SBNO2	99	67.769	Heterocephalus_glaber_male
ENSLBEG00000025016	si:ch73-63e15.2	99	86.965	ENSHCOG00000000884	si:ch73-63e15.2	90	88.345	Hippocampus_comes
ENSLBEG00000025016	si:ch73-63e15.2	97	81.124	ENSIPUG00000000537	si:ch73-63e15.2	95	73.135	Ictalurus_punctatus
ENSLBEG00000025016	si:ch73-63e15.2	99	79.225	ENSIPUG00000019672	sbno2	99	79.125	Ictalurus_punctatus
ENSLBEG00000025016	si:ch73-63e15.2	95	70.637	ENSSTOG00000025832	SBNO2	84	68.966	Ictidomys_tridecemlineatus
ENSLBEG00000025016	si:ch73-63e15.2	95	66.527	ENSJJAG00000017397	Sbno2	85	65.162	Jaculus_jaculus
ENSLBEG00000025016	si:ch73-63e15.2	99	88.924	ENSKMAG00000005541	si:ch73-63e15.2	99	78.489	Kryptolebias_marmoratus
ENSLBEG00000025016	si:ch73-63e15.2	64	69.231	ENSLACG00000012598	SBNO2	100	70.654	Latimeria_chalumnae
ENSLBEG00000025016	si:ch73-63e15.2	95	85.486	ENSLOCG00000004643	si:ch73-63e15.2	85	85.026	Lepisosteus_oculatus
ENSLBEG00000025016	si:ch73-63e15.2	94	69.442	ENSLAFG00000008824	SBNO2	89	65.075	Loxodonta_africana
ENSLBEG00000025016	si:ch73-63e15.2	95	68.711	ENSMFAG00000040030	SBNO2	90	66.552	Macaca_fascicularis
ENSLBEG00000025016	si:ch73-63e15.2	95	70.343	ENSMMUG00000010886	SBNO2	87	66.783	Macaca_mulatta
ENSLBEG00000025016	si:ch73-63e15.2	95	70.417	ENSMNEG00000039927	SBNO2	88	67.983	Macaca_nemestrina
ENSLBEG00000025016	si:ch73-63e15.2	95	70.343	ENSMLEG00000038556	SBNO2	90	69.034	Mandrillus_leucophaeus
ENSLBEG00000025016	si:ch73-63e15.2	99	93.167	ENSMAMG00000018758	si:ch73-63e15.2	100	84.387	Mastacembelus_armatus
ENSLBEG00000025016	si:ch73-63e15.2	99	86.561	ENSMZEG00005010682	si:ch73-63e15.2	94	77.771	Maylandia_zebra
ENSLBEG00000025016	si:ch73-63e15.2	96	72.194	ENSMGAG00000003801	SBNO2	90	71.611	Meleagris_gallopavo
ENSLBEG00000025016	si:ch73-63e15.2	96	69.794	ENSMAUG00000008034	Sbno2	85	68.534	Mesocricetus_auratus
ENSLBEG00000025016	si:ch73-63e15.2	97	68.712	ENSMICG00000013071	SBNO2	88	67.715	Microcebus_murinus
ENSLBEG00000025016	si:ch73-63e15.2	96	69.938	ENSMOCG00000010504	Sbno2	84	68.357	Microtus_ochrogaster
ENSLBEG00000025016	si:ch73-63e15.2	96	72.268	ENSMODG00000005382	SBNO2	82	71.380	Monodelphis_domestica
ENSLBEG00000025016	si:ch73-63e15.2	99	85.356	ENSMALG00000021831	si:ch73-63e15.2	99	85.146	Monopterus_albus
ENSLBEG00000025016	si:ch73-63e15.2	96	69.183	ENSMUSG00000035673	Sbno2	93	67.860	Mus_musculus
ENSLBEG00000025016	si:ch73-63e15.2	96	69.278	MGP_PahariEiJ_G0030976	Sbno2	84	67.860	Mus_pahari
ENSLBEG00000025016	si:ch73-63e15.2	96	69.381	MGP_SPRETEiJ_G0016381	Sbno2	90	68.122	Mus_spretus
ENSLBEG00000025016	si:ch73-63e15.2	95	70.747	ENSMPUG00000008747	SBNO2	91	70.942	Mustela_putorius_furo
ENSLBEG00000025016	si:ch73-63e15.2	95	69.048	ENSNGAG00000004308	Sbno2	86	67.817	Nannospalax_galili
ENSLBEG00000025016	si:ch73-63e15.2	99	82.777	ENSNBRG00000022968	si:ch73-63e15.2	99	90.625	Neolamprologus_brichardi
ENSLBEG00000025016	si:ch73-63e15.2	88	78.723	ENSNLEG00000001305	SBNO2	87	69.976	Nomascus_leucogenys
ENSLBEG00000025016	si:ch73-63e15.2	79	68.502	ENSMEUG00000013511	-	78	67.410	Notamacropus_eugenii
ENSLBEG00000025016	si:ch73-63e15.2	95	69.465	ENSOPRG00000017238	SBNO2	94	67.722	Ochotona_princeps
ENSLBEG00000025016	si:ch73-63e15.2	95	69.239	ENSODEG00000011822	SBNO2	85	67.210	Octodon_degus
ENSLBEG00000025016	si:ch73-63e15.2	99	87.407	ENSONIG00000002490	si:ch73-63e15.2	98	87.858	Oreochromis_niloticus
ENSLBEG00000025016	si:ch73-63e15.2	95	89.892	ENSORLG00000000913	si:ch73-63e15.2	100	78.003	Oryzias_latipes
ENSLBEG00000025016	si:ch73-63e15.2	95	89.796	ENSORLG00020010978	si:ch73-63e15.2	100	77.835	Oryzias_latipes_hni
ENSLBEG00000025016	si:ch73-63e15.2	95	89.892	ENSORLG00015000202	si:ch73-63e15.2	100	77.937	Oryzias_latipes_hsok
ENSLBEG00000025016	si:ch73-63e15.2	95	89.689	ENSOMEG00000000359	si:ch73-63e15.2	93	77.424	Oryzias_melastigma
ENSLBEG00000025016	si:ch73-63e15.2	95	69.351	ENSOARG00000011130	SBNO2	86	65.978	Ovis_aries
ENSLBEG00000025016	si:ch73-63e15.2	95	70.282	ENSPPAG00000032482	SBNO2	90	66.894	Pan_paniscus
ENSLBEG00000025016	si:ch73-63e15.2	95	70.386	ENSPTRG00000010185	SBNO2	88	67.811	Pan_troglodytes
ENSLBEG00000025016	si:ch73-63e15.2	95	66.250	ENSPANG00000009658	SBNO2	88	64.206	Papio_anubis
ENSLBEG00000025016	si:ch73-63e15.2	98	81.800	ENSPKIG00000024201	si:ch73-63e15.2	85	82.363	Paramormyrops_kingsleyae
ENSLBEG00000025016	si:ch73-63e15.2	99	75.820	ENSPKIG00000009707	-	83	79.773	Paramormyrops_kingsleyae
ENSLBEG00000025016	si:ch73-63e15.2	95	73.395	ENSPSIG00000002852	SBNO2	99	72.893	Pelodiscus_sinensis
ENSLBEG00000025016	si:ch73-63e15.2	99	88.580	ENSPMGG00000014375	si:ch73-63e15.2	91	87.574	Periophthalmus_magnuspinnatus
ENSLBEG00000025016	si:ch73-63e15.2	96	66.667	ENSPEMG00000024122	Sbno2	87	65.299	Peromyscus_maniculatus_bairdii
ENSLBEG00000025016	si:ch73-63e15.2	96	71.546	ENSPCIG00000011264	SBNO2	82	71.391	Phascolarctos_cinereus
ENSLBEG00000025016	si:ch73-63e15.2	99	88.571	ENSPFOG00000004096	si:ch73-63e15.2	99	87.696	Poecilia_formosa
ENSLBEG00000025016	si:ch73-63e15.2	95	88.665	ENSPLAG00000014653	si:ch73-63e15.2	100	76.291	Poecilia_latipinna
ENSLBEG00000025016	si:ch73-63e15.2	99	88.466	ENSPMEG00000002129	si:ch73-63e15.2	96	86.794	Poecilia_mexicana
ENSLBEG00000025016	si:ch73-63e15.2	99	88.360	ENSPREG00000006755	si:ch73-63e15.2	94	75.662	Poecilia_reticulata
ENSLBEG00000025016	si:ch73-63e15.2	85	72.434	ENSPCAG00000012256	SBNO2	77	68.756	Procavia_capensis
ENSLBEG00000025016	si:ch73-63e15.2	95	62.187	ENSPCOG00000015216	SBNO2	88	61.909	Propithecus_coquereli
ENSLBEG00000025016	si:ch73-63e15.2	99	86.561	ENSPNYG00000019926	si:ch73-63e15.2	99	78.673	Pundamilia_nyererei
ENSLBEG00000025016	si:ch73-63e15.2	96	82.291	ENSPNAG00000026609	sbno2a	98	72.334	Pygocentrus_nattereri
ENSLBEG00000025016	si:ch73-63e15.2	97	82.458	ENSPNAG00000020260	si:ch73-63e15.2	86	80.952	Pygocentrus_nattereri
ENSLBEG00000025016	si:ch73-63e15.2	96	69.588	ENSRNOG00000013987	Sbno2	89	68.329	Rattus_norvegicus
ENSLBEG00000025016	si:ch73-63e15.2	95	69.433	ENSRBIG00000009740	SBNO2	87	67.259	Rhinopithecus_bieti
ENSLBEG00000025016	si:ch73-63e15.2	81	70.991	ENSRROG00000044671	SBNO2	86	69.628	Rhinopithecus_roxellana
ENSLBEG00000025016	si:ch73-63e15.2	95	70.177	ENSSBOG00000023562	SBNO2	89	67.210	Saimiri_boliviensis_boliviensis
ENSLBEG00000025016	si:ch73-63e15.2	95	72.443	ENSSHAG00000010241	SBNO2	97	71.129	Sarcophilus_harrisii
ENSLBEG00000025016	si:ch73-63e15.2	95	82.553	ENSSFOG00015005861	si:ch73-63e15.2	96	81.448	Scleropages_formosus
ENSLBEG00000025016	si:ch73-63e15.2	99	94.444	ENSSMAG00000012489	si:ch73-63e15.2	100	85.944	Scophthalmus_maximus
ENSLBEG00000025016	si:ch73-63e15.2	99	92.161	ENSSDUG00000003527	si:ch73-63e15.2	100	86.620	Seriola_dumerili
ENSLBEG00000025016	si:ch73-63e15.2	99	91.570	ENSSLDG00000004623	si:ch73-63e15.2	100	86.492	Seriola_lalandi_dorsalis
ENSLBEG00000025016	si:ch73-63e15.2	95	94.577	ENSSPAG00000017717	si:ch73-63e15.2	100	85.100	Stegastes_partitus
ENSLBEG00000025016	si:ch73-63e15.2	95	70.570	ENSSSCG00000030042	SBNO2	90	68.224	Sus_scrofa
ENSLBEG00000025016	si:ch73-63e15.2	95	88.853	ENSTRUG00000018193	si:ch73-63e15.2	86	89.498	Takifugu_rubripes
ENSLBEG00000025016	si:ch73-63e15.2	53	93.969	ENSTNIG00000000856	si:ch73-63e15.2	93	95.287	Tetraodon_nigroviridis
ENSLBEG00000025016	si:ch73-63e15.2	97	70.533	ENSUAMG00000006568	SBNO2	93	71.561	Ursus_americanus
ENSLBEG00000025016	si:ch73-63e15.2	95	70.864	ENSVVUG00000022823	SBNO2	82	68.821	Vulpes_vulpes
ENSLBEG00000025016	si:ch73-63e15.2	85	75.709	ENSXETG00000021579	sbno2	91	75.304	Xenopus_tropicalis
ENSLBEG00000025016	si:ch73-63e15.2	99	87.252	ENSXCOG00000009209	si:ch73-63e15.2	95	87.658	Xiphophorus_couchianus
ENSLBEG00000025016	si:ch73-63e15.2	99	88.665	ENSXMAG00000012091	si:ch73-63e15.2	86	90.467	Xiphophorus_maculatus