EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000025237 (Gene tree)
Gene ID: 109995645
Gene Symbol: larsb
Alias: cb667|lars|wu:fb36b12
Full Name: leucyl-tRNA synthetase
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 24407 bases
Position: chrFKLU01000332.1:109249-133655
Accession: 109995645
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000033556	tRNA-synt_1g	PF09334.11	2.2e-16	1	2
ENSLBEP00000033556	tRNA-synt_1g	PF09334.11	2.2e-16	2	2
ENSLBEP00000033515	tRNA-synt_1g	PF09334.11	2.2e-16	1	2
ENSLBEP00000033515	tRNA-synt_1g	PF09334.11	2.2e-16	2	2
ENSLBEP00000033609	tRNA-synt_1g	PF09334.11	4.7e-11	1	1
ENSLBEP00000033556	Anticodon_1	PF08264.13	3e-13	1	1
ENSLBEP00000033515	Anticodon_1	PF08264.13	3e-13	1	1
ENSLBEP00000033609	Anticodon_1	PF08264.13	3.2e-13	1	1
ENSLBEP00000033556	tRNA-synt_1	PF00133.22	1.3e-37	1	2
ENSLBEP00000033556	tRNA-synt_1	PF00133.22	1.3e-37	2	2
ENSLBEP00000033515	tRNA-synt_1	PF00133.22	1.4e-37	1	2
ENSLBEP00000033515	tRNA-synt_1	PF00133.22	1.4e-37	2	2
ENSLBEP00000033609	tRNA-synt_1	PF00133.22	2.4e-37	1	2
ENSLBEP00000033609	tRNA-synt_1	PF00133.22	2.4e-37	2	2
ENSLBEP00000033556	tRNA-synt_1e	PF01406.19	6.5e-07	1	1
ENSLBEP00000033515	tRNA-synt_1e	PF01406.19	6.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000035027	-	5244	XM_020649441	ENSLBEP00000033556	1185 (aa)	XP_020505097	UPI0009B4E351
ENSLBET00000034986	-	4754	-	ENSLBEP00000033515	1208 (aa)	-	-
ENSLBET00000035080	-	3534	-	ENSLBEP00000033609	1177 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000025237's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000025237's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000025237	larsb	100	78.565	ENSG00000133706	LARS	100	79.292	Homo_sapiens
ENSLBEG00000025237	larsb	100	92.839	ENSAPOG00000010585	larsb	100	93.214	Acanthochromis_polyacanthus
ENSLBEG00000025237	larsb	99	78.903	ENSAMEG00000017584	LARS	100	78.903	Ailuropoda_melanoleuca
ENSLBEG00000025237	larsb	100	91.660	ENSACIG00000014026	larsb	100	91.660	Amphilophus_citrinellus
ENSLBEG00000025237	larsb	100	93.418	ENSAOCG00000016931	larsb	100	93.418	Amphiprion_ocellaris
ENSLBEG00000025237	larsb	100	93.502	ENSAPEG00000017720	larsb	100	93.502	Amphiprion_percula
ENSLBEG00000025237	larsb	100	89.048	ENSATEG00000010441	larsb	99	89.105	Anabas_testudineus
ENSLBEG00000025237	larsb	96	79.353	ENSAPLG00000008145	LARS	100	79.353	Anas_platyrhynchos
ENSLBEG00000025237	larsb	100	77.468	ENSACAG00000013916	LARS	100	77.165	Anolis_carolinensis
ENSLBEG00000025237	larsb	100	69.873	ENSANAG00000014375	LARS	100	69.873	Aotus_nancymaae
ENSLBEG00000025237	larsb	100	92.911	ENSACLG00000010881	larsb	100	92.911	Astatotilapia_calliptera
ENSLBEG00000025237	larsb	100	87.690	ENSAMXG00000019979	larsb	100	87.511	Astyanax_mexicanus
ENSLBEG00000025237	larsb	100	77.722	ENSBTAG00000006765	LARS	100	77.722	Bos_taurus
ENSLBEG00000025237	larsb	99	55.490	WBGene00003073	lars-1	99	55.658	Caenorhabditis_elegans
ENSLBEG00000025237	larsb	100	78.312	ENSCJAG00000021314	LARS	100	78.938	Callithrix_jacchus
ENSLBEG00000025237	larsb	100	79.241	ENSCAFG00000006431	LARS	100	79.241	Canis_familiaris
ENSLBEG00000025237	larsb	99	79.290	ENSCAFG00020025009	LARS	100	79.223	Canis_lupus_dingo
ENSLBEG00000025237	larsb	100	77.890	ENSCHIG00000014949	LARS	100	77.890	Capra_hircus
ENSLBEG00000025237	larsb	100	78.312	ENSTSYG00000001253	LARS	100	78.312	Carlito_syrichta
ENSLBEG00000025237	larsb	96	62.084	ENSCAPG00000015676	LARS	97	62.259	Cavia_aperea
ENSLBEG00000025237	larsb	100	77.131	ENSCPOG00000012329	LARS	100	77.131	Cavia_porcellus
ENSLBEG00000025237	larsb	99	78.849	ENSCCAG00000020789	LARS	99	78.849	Cebus_capucinus
ENSLBEG00000025237	larsb	98	78.497	ENSCATG00000033463	LARS	100	79.115	Cercocebus_atys
ENSLBEG00000025237	larsb	100	77.384	ENSCLAG00000011193	LARS	100	77.384	Chinchilla_lanigera
ENSLBEG00000025237	larsb	99	78.584	ENSCSAG00000012280	LARS	97	78.584	Chlorocebus_sabaeus
ENSLBEG00000025237	larsb	90	72.027	ENSCHOG00000009309	LARS	90	72.027	Choloepus_hoffmanni
ENSLBEG00000025237	larsb	99	79.290	ENSCPBG00000008415	LARS	99	80.448	Chrysemys_picta_bellii
ENSLBEG00000025237	larsb	99	63.943	ENSCING00000008535	-	99	63.966	Ciona_intestinalis
ENSLBEG00000025237	larsb	99	63.162	ENSCSAVG00000009040	-	100	67.762	Ciona_savignyi
ENSLBEG00000025237	larsb	100	78.734	ENSCANG00000031137	LARS	100	78.734	Colobus_angolensis_palliatus
ENSLBEG00000025237	larsb	93	72.909	ENSCGRG00001004647	Lars	99	72.909	Cricetulus_griseus_chok1gshd
ENSLBEG00000025237	larsb	100	75.042	ENSCGRG00000007284	Lars	100	75.042	Cricetulus_griseus_crigri
ENSLBEG00000025237	larsb	100	92.081	ENSCSEG00000014984	larsb	100	91.990	Cynoglossus_semilaevis
ENSLBEG00000025237	larsb	100	93.502	ENSCVAG00000014685	larsb	100	93.502	Cyprinodon_variegatus
ENSLBEG00000025237	larsb	67	87.359	ENSDARG00000019280	larsb	100	87.359	Danio_rerio
ENSLBEG00000025237	larsb	96	78.030	ENSDNOG00000017963	LARS	100	78.030	Dasypus_novemcinctus
ENSLBEG00000025237	larsb	100	73.294	ENSDORG00000014913	Lars	100	73.440	Dipodomys_ordii
ENSLBEG00000025237	larsb	99	58.592	FBgn0284253	LeuRS	99	58.592	Drosophila_melanogaster
ENSLBEG00000025237	larsb	94	64.036	ENSETEG00000003145	LARS	100	64.036	Echinops_telfairi
ENSLBEG00000025237	larsb	92	59.673	ENSEBUG00000014985	larsb	98	59.673	Eptatretus_burgeri
ENSLBEG00000025237	larsb	100	78.987	ENSEASG00005020569	LARS	100	79.174	Equus_asinus_asinus
ENSLBEG00000025237	larsb	100	78.903	ENSECAG00000008963	LARS	100	79.558	Equus_caballus
ENSLBEG00000025237	larsb	85	80.000	ENSEEUG00000014854	LARS	85	79.661	Erinaceus_europaeus
ENSLBEG00000025237	larsb	100	85.992	ENSELUG00000023311	larsb	100	85.992	Esox_lucius
ENSLBEG00000025237	larsb	99	78.698	ENSFCAG00000008715	LARS	100	80.187	Felis_catus
ENSLBEG00000025237	larsb	100	79.072	ENSFALG00000003209	LARS	93	79.072	Ficedula_albicollis
ENSLBEG00000025237	larsb	100	77.046	ENSFDAG00000020764	LARS	100	77.046	Fukomys_damarensis
ENSLBEG00000025237	larsb	93	91.667	ENSFHEG00000010437	larsb	100	93.151	Fundulus_heteroclitus
ENSLBEG00000025237	larsb	100	86.853	ENSGMOG00000013645	larsb	100	86.768	Gadus_morhua
ENSLBEG00000025237	larsb	100	79.764	ENSGALG00000007494	LARS	100	79.764	Gallus_gallus
ENSLBEG00000025237	larsb	100	92.574	ENSGAFG00000005029	larsb	100	92.574	Gambusia_affinis
ENSLBEG00000025237	larsb	99	90.786	ENSGACG00000020720	larsb	99	90.617	Gasterosteus_aculeatus
ENSLBEG00000025237	larsb	99	78.614	ENSGAGG00000002353	LARS	100	78.547	Gopherus_agassizii
ENSLBEG00000025237	larsb	100	78.481	ENSGGOG00000004103	LARS	100	78.481	Gorilla_gorilla
ENSLBEG00000025237	larsb	99	91.009	ENSHBUG00000003051	larsb	100	93.291	Haplochromis_burtoni
ENSLBEG00000025237	larsb	100	77.468	ENSHGLG00000006937	LARS	100	77.468	Heterocephalus_glaber_female
ENSLBEG00000025237	larsb	100	77.468	ENSHGLG00100002801	LARS	100	77.468	Heterocephalus_glaber_male
ENSLBEG00000025237	larsb	99	90.372	ENSHCOG00000003651	larsb	100	90.372	Hippocampus_comes
ENSLBEG00000025237	larsb	100	85.063	ENSIPUG00000010756	lars	100	85.322	Ictalurus_punctatus
ENSLBEG00000025237	larsb	100	78.397	ENSSTOG00000002356	LARS	100	78.397	Ictidomys_tridecemlineatus
ENSLBEG00000025237	larsb	100	77.131	ENSJJAG00000015265	Lars	100	77.131	Jaculus_jaculus
ENSLBEG00000025237	larsb	100	93.080	ENSKMAG00000009903	larsb	100	93.080	Kryptolebias_marmoratus
ENSLBEG00000025237	larsb	100	79.293	ENSLACG00000009321	LARS	100	79.545	Latimeria_chalumnae
ENSLBEG00000025237	larsb	99	83.108	ENSLOCG00000010442	larsb	100	82.939	Lepisosteus_oculatus
ENSLBEG00000025237	larsb	99	78.143	ENSLAFG00000000318	LARS	100	78.107	Loxodonta_africana
ENSLBEG00000025237	larsb	100	78.565	ENSMFAG00000038685	LARS	100	78.565	Macaca_fascicularis
ENSLBEG00000025237	larsb	100	78.565	ENSMMUG00000029787	LARS	100	78.565	Macaca_mulatta
ENSLBEG00000025237	larsb	99	77.191	ENSMNEG00000044014	LARS	100	76.689	Macaca_nemestrina
ENSLBEG00000025237	larsb	99	78.614	ENSMLEG00000037563	LARS	100	78.547	Mandrillus_leucophaeus
ENSLBEG00000025237	larsb	100	93.418	ENSMAMG00000021385	larsb	100	93.418	Mastacembelus_armatus
ENSLBEG00000025237	larsb	100	92.827	ENSMZEG00005002662	larsb	100	92.827	Maylandia_zebra
ENSLBEG00000025237	larsb	96	80.490	ENSMGAG00000009388	LARS	100	80.490	Meleagris_gallopavo
ENSLBEG00000025237	larsb	99	68.132	ENSMAUG00000003063	Lars	93	80.172	Mesocricetus_auratus
ENSLBEG00000025237	larsb	100	79.072	ENSMICG00000035589	-	100	79.072	Microcebus_murinus
ENSLBEG00000025237	larsb	100	65.823	ENSMICG00000035435	-	100	65.823	Microcebus_murinus
ENSLBEG00000025237	larsb	100	77.066	ENSMOCG00000002092	Lars	100	77.066	Microtus_ochrogaster
ENSLBEG00000025237	larsb	100	88.964	ENSMMOG00000013802	larsb	100	88.870	Mola_mola
ENSLBEG00000025237	larsb	99	72.866	ENSMODG00000010231	LARS	100	71.986	Monodelphis_domestica
ENSLBEG00000025237	larsb	100	90.794	ENSMALG00000018444	larsb	100	90.794	Monopterus_albus
ENSLBEG00000025237	larsb	100	76.897	MGP_CAROLIEiJ_G0022225	Lars	100	76.897	Mus_caroli
ENSLBEG00000025237	larsb	100	76.560	ENSMUSG00000024493	Lars	100	76.560	Mus_musculus
ENSLBEG00000025237	larsb	100	76.728	MGP_PahariEiJ_G0018958	Lars	100	76.728	Mus_pahari
ENSLBEG00000025237	larsb	100	76.897	MGP_SPRETEiJ_G0023135	Lars	100	76.897	Mus_spretus
ENSLBEG00000025237	larsb	100	78.903	ENSMPUG00000007844	LARS	100	78.903	Mustela_putorius_furo
ENSLBEG00000025237	larsb	99	77.703	ENSMLUG00000001125	LARS	100	77.703	Myotis_lucifugus
ENSLBEG00000025237	larsb	100	76.624	ENSNGAG00000011596	Lars	100	76.624	Nannospalax_galili
ENSLBEG00000025237	larsb	100	92.911	ENSNBRG00000005764	larsb	100	92.911	Neolamprologus_brichardi
ENSLBEG00000025237	larsb	99	78.191	ENSNLEG00000009816	LARS	100	78.125	Nomascus_leucogenys
ENSLBEG00000025237	larsb	53	83.784	ENSMEUG00000002332	-	53	82.759	Notamacropus_eugenii
ENSLBEG00000025237	larsb	78	79.679	ENSOPRG00000003076	LARS	83	79.679	Ochotona_princeps
ENSLBEG00000025237	larsb	99	75.550	ENSODEG00000004882	LARS	99	75.550	Octodon_degus
ENSLBEG00000025237	larsb	100	93.165	ENSONIG00000008493	larsb	100	93.165	Oreochromis_niloticus
ENSLBEG00000025237	larsb	100	75.483	ENSOANG00000005755	LARS	100	75.462	Ornithorhynchus_anatinus
ENSLBEG00000025237	larsb	100	78.650	ENSOCUG00000015684	LARS	100	78.650	Oryctolagus_cuniculus
ENSLBEG00000025237	larsb	100	91.814	ENSORLG00000001622	larsb	100	91.814	Oryzias_latipes
ENSLBEG00000025237	larsb	100	91.814	ENSORLG00020019950	larsb	100	91.814	Oryzias_latipes_hni
ENSLBEG00000025237	larsb	100	91.983	ENSORLG00015003895	larsb	100	91.983	Oryzias_latipes_hsok
ENSLBEG00000025237	larsb	100	92.152	ENSOMEG00000005677	larsb	100	92.152	Oryzias_melastigma
ENSLBEG00000025237	larsb	96	76.890	ENSOGAG00000008750	LARS	100	76.696	Otolemur_garnettii
ENSLBEG00000025237	larsb	100	77.637	ENSOARG00000015911	-	99	77.637	Ovis_aries
ENSLBEG00000025237	larsb	99	77.703	ENSOARG00000002454	-	100	77.703	Ovis_aries
ENSLBEG00000025237	larsb	99	78.529	ENSPPAG00000027964	LARS	99	78.529	Pan_paniscus
ENSLBEG00000025237	larsb	100	78.903	ENSPPRG00000023492	LARS	100	78.903	Panthera_pardus
ENSLBEG00000025237	larsb	100	78.819	ENSPTIG00000013110	LARS	100	78.819	Panthera_tigris_altaica
ENSLBEG00000025237	larsb	100	78.397	ENSPTRG00000017372	LARS	100	78.397	Pan_troglodytes
ENSLBEG00000025237	larsb	100	78.397	ENSPANG00000002663	LARS	100	78.397	Papio_anubis
ENSLBEG00000025237	larsb	98	83.865	ENSPKIG00000006650	larsb	99	82.498	Paramormyrops_kingsleyae
ENSLBEG00000025237	larsb	99	79.290	ENSPSIG00000015641	LARS	100	79.290	Pelodiscus_sinensis
ENSLBEG00000025237	larsb	68	92.000	ENSPMGG00000019556	LARS	100	92.000	Periophthalmus_magnuspinnatus
ENSLBEG00000025237	larsb	100	73.187	ENSPEMG00000010933	Lars	100	73.187	Peromyscus_maniculatus_bairdii
ENSLBEG00000025237	larsb	50	61.028	ENSPMAG00000005301	larsb	99	61.028	Petromyzon_marinus
ENSLBEG00000025237	larsb	100	76.793	ENSPCIG00000030572	LARS	100	76.962	Phascolarctos_cinereus
ENSLBEG00000025237	larsb	100	92.996	ENSPFOG00000002361	larsb	100	92.996	Poecilia_formosa
ENSLBEG00000025237	larsb	100	92.996	ENSPLAG00000016550	larsb	100	92.996	Poecilia_latipinna
ENSLBEG00000025237	larsb	100	92.827	ENSPMEG00000018422	larsb	100	92.827	Poecilia_mexicana
ENSLBEG00000025237	larsb	100	92.405	ENSPREG00000005668	larsb	100	92.489	Poecilia_reticulata
ENSLBEG00000025237	larsb	99	77.145	ENSPPYG00000015908	LARS	97	77.400	Pongo_abelii
ENSLBEG00000025237	larsb	89	71.875	ENSPCAG00000005621	LARS	99	71.875	Procavia_capensis
ENSLBEG00000025237	larsb	100	78.080	ENSPCOG00000019325	LARS	100	78.080	Propithecus_coquereli
ENSLBEG00000025237	larsb	96	70.166	ENSPVAG00000011237	LARS	99	70.516	Pteropus_vampyrus
ENSLBEG00000025237	larsb	100	92.658	ENSPNYG00000015254	larsb	100	92.658	Pundamilia_nyererei
ENSLBEG00000025237	larsb	100	86.582	ENSPNAG00000027191	larsb	100	86.582	Pygocentrus_nattereri
ENSLBEG00000025237	larsb	100	76.560	ENSRNOG00000018304	Lars	100	76.560	Rattus_norvegicus
ENSLBEG00000025237	larsb	94	77.309	ENSRBIG00000043198	LARS	100	77.240	Rhinopithecus_bieti
ENSLBEG00000025237	larsb	90	45.570	YPL160W	CDC60	99	45.446	Saccharomyces_cerevisiae
ENSLBEG00000025237	larsb	99	76.078	ENSSBOG00000026661	LARS	100	78.886	Saimiri_boliviensis_boliviensis
ENSLBEG00000025237	larsb	100	78.415	ENSSHAG00000006084	LARS	100	78.583	Sarcophilus_harrisii
ENSLBEG00000025237	larsb	97	85.315	ENSSFOG00015018117	larsb	90	85.315	Scleropages_formosus
ENSLBEG00000025237	larsb	88	94.061	ENSSMAG00000004078	larsb	97	93.960	Scophthalmus_maximus
ENSLBEG00000025237	larsb	100	94.599	ENSSDUG00000021142	larsb	100	94.599	Seriola_dumerili
ENSLBEG00000025237	larsb	100	94.768	ENSSLDG00000007054	larsb	100	94.768	Seriola_lalandi_dorsalis
ENSLBEG00000025237	larsb	85	70.922	ENSSARG00000013481	LARS	83	77.586	Sorex_araneus
ENSLBEG00000025237	larsb	100	78.583	ENSSPUG00000013805	LARS	100	79.089	Sphenodon_punctatus
ENSLBEG00000025237	larsb	100	94.262	ENSSPAG00000012124	larsb	100	94.262	Stegastes_partitus
ENSLBEG00000025237	larsb	100	75.781	ENSSSCG00000014411	LARS	100	75.781	Sus_scrofa
ENSLBEG00000025237	larsb	99	79.205	ENSTGUG00000000092	-	100	78.505	Taeniopygia_guttata
ENSLBEG00000025237	larsb	100	89.789	ENSTRUG00000005358	larsb	100	89.789	Takifugu_rubripes
ENSLBEG00000025237	larsb	99	86.291	ENSTNIG00000018214	larsb	100	86.291	Tetraodon_nigroviridis
ENSLBEG00000025237	larsb	91	77.328	ENSTBEG00000003757	LARS	94	77.328	Tupaia_belangeri
ENSLBEG00000025237	larsb	96	75.657	ENSTTRG00000016712	LARS	96	75.657	Tursiops_truncatus
ENSLBEG00000025237	larsb	94	79.767	ENSUAMG00000019907	LARS	99	79.767	Ursus_americanus
ENSLBEG00000025237	larsb	100	78.819	ENSUMAG00000010585	LARS	100	78.819	Ursus_maritimus
ENSLBEG00000025237	larsb	92	77.685	ENSVPAG00000000557	LARS	92	77.685	Vicugna_pacos
ENSLBEG00000025237	larsb	100	79.156	ENSVVUG00000021124	LARS	100	79.156	Vulpes_vulpes
ENSLBEG00000025237	larsb	100	79.848	ENSXETG00000002320	lars	100	79.848	Xenopus_tropicalis
ENSLBEG00000025237	larsb	100	92.152	ENSXMAG00000001454	larsb	100	92.152	Xiphophorus_maculatus