EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000025293 (Gene tree)
Gene ID: 110004073
Gene Symbol: -
Alias: -
Full Name: la-related protein 4B-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 25908 bases
Position: chrFKLU01001385.1:2835-28742
Accession: 110004073
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000033578	La	PF05383.17	1.4e-13	1	1
ENSLBEP00000033603	La	PF05383.17	1.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000035074	-	2726	-	ENSLBEP00000033603	769 (aa)	-	-
ENSLBET00000035048	-	2594	XM_020659616	ENSLBEP00000033578	725 (aa)	XP_020515272	-

Gene Model

Click here to download ENSLBEG00000025293's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000025293's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000025293	-	58	44.931	ENSLBEG00000019306	larp4ab	54	45.561
ENSLBEG00000025293	-	75	38.761	ENSLBEG00000014537	larp4aa	50	46.296

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000025293	-	85	58.942	ENSG00000107929	LARP4B	82	58.631	Homo_sapiens
ENSLBEG00000025293	-	84	90.180	ENSAPOG00000020531	LARP4B	98	87.207	Acanthochromis_polyacanthus
ENSLBEG00000025293	-	81	59.869	ENSAMEG00000001810	LARP4B	80	59.543	Ailuropoda_melanoleuca
ENSLBEG00000025293	-	82	81.788	ENSAOCG00000007887	-	99	78.880	Amphiprion_ocellaris
ENSLBEG00000025293	-	82	89.713	ENSAPEG00000002512	LARP4B	80	86.080	Amphiprion_percula
ENSLBEG00000025293	-	82	90.787	ENSATEG00000012614	LARP4B	80	87.560	Anabas_testudineus
ENSLBEG00000025293	-	87	63.636	ENSAPLG00000003813	LARP4B	82	63.333	Anas_platyrhynchos
ENSLBEG00000025293	-	85	65.714	ENSACAG00000002858	LARP4B	81	65.705	Anolis_carolinensis
ENSLBEG00000025293	-	85	58.942	ENSANAG00000007531	-	77	61.436	Aotus_nancymaae
ENSLBEG00000025293	-	82	92.269	ENSACLG00000026356	LARP4B	80	88.960	Astatotilapia_calliptera
ENSLBEG00000025293	-	82	59.046	ENSAMXG00000003335	larp4b	81	58.484	Astyanax_mexicanus
ENSLBEG00000025293	-	81	63.007	ENSBTAG00000013899	LARP4B	79	62.375	Bos_taurus
ENSLBEG00000025293	-	79	62.437	ENSCJAG00000018434	LARP4B	77	62.167	Callithrix_jacchus
ENSLBEG00000025293	-	81	60.685	ENSCAFG00020004209	LARP4B	80	60.196	Canis_lupus_dingo
ENSLBEG00000025293	-	81	61.111	ENSCHIG00000013543	LARP4B	80	60.294	Capra_hircus
ENSLBEG00000025293	-	62	71.556	ENSTSYG00000002568	LARP4B	74	71.111	Carlito_syrichta
ENSLBEG00000025293	-	54	70.408	ENSCAPG00000009725	LARP4B	56	71.169	Cavia_aperea
ENSLBEG00000025293	-	85	60.125	ENSCPOG00000009375	LARP4B	82	59.813	Cavia_porcellus
ENSLBEG00000025293	-	85	58.631	ENSCCAG00000024869	LARP4B	77	61.102	Cebus_capucinus
ENSLBEG00000025293	-	85	59.253	ENSCATG00000019750	LARP4B	82	59.783	Cercocebus_atys
ENSLBEG00000025293	-	85	62.019	ENSCLAG00000011570	LARP4B	81	61.699	Chinchilla_lanigera
ENSLBEG00000025293	-	85	64.526	ENSCPBG00000017063	LARP4B	82	64.205	Chrysemys_picta_bellii
ENSLBEG00000025293	-	85	56.921	ENSCANG00000038021	LARP4B	81	57.453	Colobus_angolensis_palliatus
ENSLBEG00000025293	-	81	59.609	ENSCGRG00001022930	Larp4b	86	59.899	Cricetulus_griseus_chok1gshd
ENSLBEG00000025293	-	81	59.609	ENSCGRG00000006022	Larp4b	86	59.899	Cricetulus_griseus_crigri
ENSLBEG00000025293	-	78	71.252	ENSCSEG00000007342	LARP4B	77	71.252	Cynoglossus_semilaevis
ENSLBEG00000025293	-	82	88.215	ENSCVAG00000008910	LARP4B	76	88.215	Cyprinodon_variegatus
ENSLBEG00000025293	-	81	60.302	ENSDARG00000062146	larp4b	81	58.497	Danio_rerio
ENSLBEG00000025293	-	83	58.170	ENSDNOG00000045543	-	100	62.188	Dasypus_novemcinctus
ENSLBEG00000025293	-	83	57.624	ENSDORG00000009328	Larp4b	90	57.303	Dipodomys_ordii
ENSLBEG00000025293	-	68	57.423	ENSETEG00000011249	LARP4B	68	57.423	Echinops_telfairi
ENSLBEG00000025293	-	81	60.294	ENSEASG00005019068	-	80	59.804	Equus_asinus_asinus
ENSLBEG00000025293	-	81	60.458	ENSECAG00000024040	LARP4B	80	59.967	Equus_caballus
ENSLBEG00000025293	-	82	59.680	ENSEEUG00000008391	LARP4B	80	59.200	Erinaceus_europaeus
ENSLBEG00000025293	-	82	78.396	ENSELUG00000008626	LARP4B	78	77.905	Esox_lucius
ENSLBEG00000025293	-	74	46.886	ENSELUG00000001417	-	77	46.995	Esox_lucius
ENSLBEG00000025293	-	81	61.301	ENSFCAG00000000721	-	83	58.716	Felis_catus
ENSLBEG00000025293	-	85	65.342	ENSFALG00000006961	LARP4B	81	65.169	Ficedula_albicollis
ENSLBEG00000025293	-	82	61.031	ENSFDAG00000006158	LARP4B	77	60.709	Fukomys_damarensis
ENSLBEG00000025293	-	88	65.198	ENSFHEG00000013037	LARP4B	65	97.479	Fundulus_heteroclitus
ENSLBEG00000025293	-	74	67.098	ENSGMOG00000010818	-	81	67.283	Gadus_morhua
ENSLBEG00000025293	-	85	65.169	ENSGALG00000006672	LARP4B	81	64.687	Gallus_gallus
ENSLBEG00000025293	-	84	81.211	ENSGACG00000017535	LARP4B	84	78.519	Gasterosteus_aculeatus
ENSLBEG00000025293	-	79	63.212	ENSGAGG00000008598	LARP4B	80	62.457	Gopherus_agassizii
ENSLBEG00000025293	-	85	59.098	ENSGGOG00000003572	LARP4B	82	58.787	Gorilla_gorilla
ENSLBEG00000025293	-	82	91.092	ENSHBUG00000007535	LARP4B	80	87.840	Haplochromis_burtoni
ENSLBEG00000025293	-	83	60.703	ENSHGLG00000012936	LARP4B	90	60.320	Heterocephalus_glaber_female
ENSLBEG00000025293	-	79	62.437	ENSHGLG00100016220	-	78	62.207	Heterocephalus_glaber_male
ENSLBEG00000025293	-	79	53.061	ENSHGLG00100017261	-	96	50.713	Heterocephalus_glaber_male
ENSLBEG00000025293	-	70	83.908	ENSHCOG00000011581	LARP4B	69	83.908	Hippocampus_comes
ENSLBEG00000025293	-	81	58.000	ENSIPUG00000009705	larp4b	83	56.594	Ictalurus_punctatus
ENSLBEG00000025293	-	78	63.238	ENSSTOG00000000587	LARP4B	78	62.162	Ictidomys_tridecemlineatus
ENSLBEG00000025293	-	81	61.827	ENSJJAG00000020847	Larp4b	79	61.501	Jaculus_jaculus
ENSLBEG00000025293	-	82	90.051	ENSKMAG00000021674	LARP4B	76	90.972	Kryptolebias_marmoratus
ENSLBEG00000025293	-	73	65.356	ENSLACG00000009492	LARP4B	76	65.421	Latimeria_chalumnae
ENSLBEG00000025293	-	82	71.452	ENSLOCG00000012290	larp4b	79	71.786	Lepisosteus_oculatus
ENSLBEG00000025293	-	81	59.903	ENSLAFG00000015334	LARP4B	78	60.595	Loxodonta_africana
ENSLBEG00000025293	-	90	57.416	ENSMFAG00000001766	LARP4B	81	57.453	Macaca_fascicularis
ENSLBEG00000025293	-	85	59.253	ENSMMUG00000005279	LARP4B	82	59.783	Macaca_mulatta
ENSLBEG00000025293	-	90	57.269	ENSMNEG00000014019	LARP4B	81	57.298	Macaca_nemestrina
ENSLBEG00000025293	-	85	59.253	ENSMLEG00000035198	LARP4B	81	59.783	Mandrillus_leucophaeus
ENSLBEG00000025293	-	88	86.050	ENSMAMG00000013742	LARP4B	81	86.050	Mastacembelus_armatus
ENSLBEG00000025293	-	76	90.364	ENSMZEG00005014594	-	79	86.897	Maylandia_zebra
ENSLBEG00000025293	-	82	91.092	ENSMZEG00005006498	-	95	90.924	Maylandia_zebra
ENSLBEG00000025293	-	78	65.604	ENSMGAG00000005472	LARP4B	78	64.628	Meleagris_gallopavo
ENSLBEG00000025293	-	85	58.450	ENSMAUG00000021657	Larp4b	86	60.738	Mesocricetus_auratus
ENSLBEG00000025293	-	81	63.149	ENSMICG00000001301	LARP4B	81	61.726	Microcebus_murinus
ENSLBEG00000025293	-	83	58.637	ENSMOCG00000021452	Larp4b	91	58.162	Microtus_ochrogaster
ENSLBEG00000025293	-	63	96.552	ENSMMOG00000011253	-	67	96.552	Mola_mola
ENSLBEG00000025293	-	82	63.819	ENSMODG00000005957	LARP4B	78	63.317	Monodelphis_domestica
ENSLBEG00000025293	-	78	62.742	ENSMALG00000012432	LARP4B	77	64.211	Monopterus_albus
ENSLBEG00000025293	-	81	60.656	MGP_CAROLIEiJ_G0018216	Larp4b	86	60.642	Mus_caroli
ENSLBEG00000025293	-	81	60.097	ENSMUSG00000033499	Larp4b	86	60.606	Mus_musculus
ENSLBEG00000025293	-	81	61.175	MGP_PahariEiJ_G0019266	Larp4b	86	61.176	Mus_pahari
ENSLBEG00000025293	-	81	60.097	MGP_SPRETEiJ_G0019074	Larp4b	86	60.774	Mus_spretus
ENSLBEG00000025293	-	83	61.208	ENSMPUG00000016220	LARP4B	79	60.987	Mustela_putorius_furo
ENSLBEG00000025293	-	77	61.319	ENSMLUG00000005880	LARP4B	78	60.963	Myotis_lucifugus
ENSLBEG00000025293	-	85	59.720	ENSNGAG00000001750	Larp4b	82	59.253	Nannospalax_galili
ENSLBEG00000025293	-	66	82.367	ENSNBRG00000020018	LARP4B	69	82.367	Neolamprologus_brichardi
ENSLBEG00000025293	-	85	59.253	ENSNLEG00000013442	LARP4B	82	59.783	Nomascus_leucogenys
ENSLBEG00000025293	-	62	54.327	ENSMEUG00000013114	-	61	54.327	Notamacropus_eugenii
ENSLBEG00000025293	-	85	55.864	ENSOPRG00000003300	LARP4B	82	55.385	Ochotona_princeps
ENSLBEG00000025293	-	83	56.410	ENSODEG00000001109	LARP4B	90	56.090	Octodon_degus
ENSLBEG00000025293	-	82	92.269	ENSONIG00000017705	LARP4B	80	88.960	Oreochromis_niloticus
ENSLBEG00000025293	-	79	61.967	ENSOANG00000006100	LARP4B	79	61.741	Ornithorhynchus_anatinus
ENSLBEG00000025293	-	87	56.241	ENSOCUG00000004950	LARP4B	81	56.681	Oryctolagus_cuniculus
ENSLBEG00000025293	-	85	83.467	ENSORLG00000006080	LARP4B	80	83.307	Oryzias_latipes
ENSLBEG00000025293	-	85	82.825	ENSORLG00020020940	LARP4B	80	82.665	Oryzias_latipes_hni
ENSLBEG00000025293	-	85	82.183	ENSORLG00015020608	LARP4B	80	82.022	Oryzias_latipes_hsok
ENSLBEG00000025293	-	82	84.486	ENSOMEG00000019619	LARP4B	80	81.571	Oryzias_melastigma
ENSLBEG00000025293	-	77	61.754	ENSOGAG00000011540	LARP4B	77	60.526	Otolemur_garnettii
ENSLBEG00000025293	-	82	60.863	ENSOARG00000015320	LARP4B	80	60.064	Ovis_aries
ENSLBEG00000025293	-	85	58.942	ENSPPAG00000039232	LARP4B	82	58.631	Pan_paniscus
ENSLBEG00000025293	-	81	61.301	ENSPPRG00000009489	LARP4B	80	60.813	Panthera_pardus
ENSLBEG00000025293	-	81	61.301	ENSPTIG00000008543	LARP4B	80	60.813	Panthera_tigris_altaica
ENSLBEG00000025293	-	85	58.942	ENSPTRG00000002235	LARP4B	82	58.631	Pan_troglodytes
ENSLBEG00000025293	-	90	57.416	ENSPANG00000023546	LARP4B	81	57.453	Papio_anubis
ENSLBEG00000025293	-	81	67.450	ENSPKIG00000012368	LARP4B	79	67.450	Paramormyrops_kingsleyae
ENSLBEG00000025293	-	78	70.186	ENSPSIG00000005600	LARP4B	99	69.565	Pelodiscus_sinensis
ENSLBEG00000025293	-	67	85.891	ENSPMGG00000008261	LARP4B	70	85.644	Periophthalmus_magnuspinnatus
ENSLBEG00000025293	-	85	58.165	ENSPEMG00000014052	Larp4b	82	58.009	Peromyscus_maniculatus_bairdii
ENSLBEG00000025293	-	82	87.248	ENSPFOG00000000029	LARP4B	80	84.211	Poecilia_formosa
ENSLBEG00000025293	-	82	87.416	ENSPLAG00000002871	LARP4B	76	87.248	Poecilia_latipinna
ENSLBEG00000025293	-	82	86.767	ENSPMEG00000016361	LARP4B	80	83.758	Poecilia_mexicana
ENSLBEG00000025293	-	87	58.118	ENSPPYG00000002035	LARP4B	77	60.488	Pongo_abelii
ENSLBEG00000025293	-	81	61.803	ENSPCOG00000014688	LARP4B	79	61.538	Propithecus_coquereli
ENSLBEG00000025293	-	62	63.576	ENSPVAG00000009784	LARP4B	63	63.576	Pteropus_vampyrus
ENSLBEG00000025293	-	82	92.605	ENSPNYG00000024252	LARP4B	80	89.280	Pundamilia_nyererei
ENSLBEG00000025293	-	82	58.814	ENSPNAG00000028956	larp4b	83	58.170	Pygocentrus_nattereri
ENSLBEG00000025293	-	88	55.882	ENSRNOG00000015888	Larp4b	92	57.504	Rattus_norvegicus
ENSLBEG00000025293	-	85	59.098	ENSRBIG00000033294	LARP4B	82	59.627	Rhinopithecus_bieti
ENSLBEG00000025293	-	85	59.253	ENSRROG00000033879	LARP4B	82	59.253	Rhinopithecus_roxellana
ENSLBEG00000025293	-	79	55.259	ENSSBOG00000021109	LARP4B	76	55.298	Saimiri_boliviensis_boliviensis
ENSLBEG00000025293	-	82	65.494	ENSSHAG00000013392	LARP4B	79	65.050	Sarcophilus_harrisii
ENSLBEG00000025293	-	85	66.879	ENSSFOG00015003256	LARP4B	80	65.303	Scleropages_formosus
ENSLBEG00000025293	-	63	100.000	ENSSMAG00000005982	-	71	100.000	Scophthalmus_maximus
ENSLBEG00000025293	-	82	93.761	ENSSDUG00000006704	LARP4B	76	93.592	Seriola_dumerili
ENSLBEG00000025293	-	64	96.047	ENSSLDG00000020660	LARP4B	71	96.047	Seriola_lalandi_dorsalis
ENSLBEG00000025293	-	81	67.530	ENSSPUG00000013734	-	79	70.276	Sphenodon_punctatus
ENSLBEG00000025293	-	88	58.218	ENSSPUG00000002102	-	80	63.226	Sphenodon_punctatus
ENSLBEG00000025293	-	63	94.432	ENSSPAG00000014628	LARP4B	70	94.432	Stegastes_partitus
ENSLBEG00000025293	-	79	61.333	ENSSSCG00000011162	LARP4B	95	61.333	Sus_scrofa
ENSLBEG00000025293	-	85	64.603	ENSTGUG00000000811	-	81	63.968	Taeniopygia_guttata
ENSLBEG00000025293	-	83	74.643	ENSTNIG00000004571	-	79	74.643	Tetraodon_nigroviridis
ENSLBEG00000025293	-	82	81.438	ENSTNIG00000007991	LARP4B	85	81.438	Tetraodon_nigroviridis
ENSLBEG00000025293	-	68	58.634	ENSTTRG00000011151	LARP4B	68	58.824	Tursiops_truncatus
ENSLBEG00000025293	-	81	60.848	ENSUAMG00000016461	LARP4B	86	60.522	Ursus_americanus
ENSLBEG00000025293	-	81	60.685	ENSUMAG00000016127	LARP4B	80	60.359	Ursus_maritimus
ENSLBEG00000025293	-	81	60.685	ENSVVUG00000008641	LARP4B	92	58.085	Vulpes_vulpes
ENSLBEG00000025293	-	81	65.936	ENSXETG00000016882	larp4b	79	65.541	Xenopus_tropicalis
ENSLBEG00000025293	-	82	68.116	ENSXCOG00000019952	LARP4B	63	98.291	Xiphophorus_couchianus
ENSLBEG00000025293	-	82	85.810	ENSXMAG00000021533	LARP4B	76	85.142	Xiphophorus_maculatus