EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000025738 (Gene tree)
Gene ID: 110003507
Gene Symbol: -
Alias: -
Full Name: nuclear GTPase SLIP-GC-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 53530 bases
Position: chrFKLU01001182.1:697-54226
Accession: 110003507
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000034215	MMR_HSR1	PF01926.23	6.7e-09	1	1
ENSLBEP00000034232	MMR_HSR1	PF01926.23	5.7e-08	1	1
ENSLBEP00000034199	MMR_HSR1	PF01926.23	5.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000035696	-	2693	-	ENSLBEP00000034215	615 (aa)	-	-
ENSLBET00000035680	-	1859	-	ENSLBEP00000034199	600 (aa)	-	-
ENSLBET00000035714	-	2041	XM_020659011	ENSLBEP00000034232	600 (aa)	XP_020514667	UPI0009B332E0

Gene Model

Click here to download ENSLBEG00000025738's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000025738's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000025738	-	97	63.961	ENSLBEG00000027088	-	91	64.123

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000025738	-	88	64.945	ENSAPEG00000007463	-	83	61.649	Amphiprion_percula
ENSLBEG00000025738	-	97	60.585	ENSAPEG00000008962	-	74	60.517	Amphiprion_percula
ENSLBEG00000025738	-	97	60.241	ENSAPEG00000007405	-	73	58.459	Amphiprion_percula
ENSLBEG00000025738	-	95	64.572	ENSATEG00000024350	-	85	64.223	Anabas_testudineus
ENSLBEG00000025738	-	97	61.102	ENSACLG00000027781	-	70	61.102	Astatotilapia_calliptera
ENSLBEG00000025738	-	99	54.950	ENSACLG00000027785	-	97	55.738	Astatotilapia_calliptera
ENSLBEG00000025738	-	97	61.102	ENSACLG00000027770	-	75	61.102	Astatotilapia_calliptera
ENSLBEG00000025738	-	97	61.962	ENSACLG00000027743	-	71	61.962	Astatotilapia_calliptera
ENSLBEG00000025738	-	77	55.195	ENSACLG00000009378	-	92	51.883	Astatotilapia_calliptera
ENSLBEG00000025738	-	95	55.401	ENSACLG00000027749	-	83	55.401	Astatotilapia_calliptera
ENSLBEG00000025738	-	97	59.966	ENSACLG00000027763	-	75	59.966	Astatotilapia_calliptera
ENSLBEG00000025738	-	91	38.475	ENSAMXG00000007315	-	75	38.475	Astyanax_mexicanus
ENSLBEG00000025738	-	97	38.825	ENSAMXG00000035650	-	85	38.825	Astyanax_mexicanus
ENSLBEG00000025738	-	98	47.148	ENSELUG00000016238	-	64	48.067	Esox_lucius
ENSLBEG00000025738	-	96	45.805	ENSELUG00000016324	-	69	45.546	Esox_lucius
ENSLBEG00000025738	-	96	45.092	ENSELUG00000016154	-	67	46.341	Esox_lucius
ENSLBEG00000025738	-	84	58.333	ENSGACG00000011412	-	80	58.140	Gasterosteus_aculeatus
ENSLBEG00000025738	-	90	33.276	ENSLOCG00000002868	-	83	33.276	Lepisosteus_oculatus
ENSLBEG00000025738	-	62	62.827	ENSMAMG00000023343	-	62	62.827	Mastacembelus_armatus
ENSLBEG00000025738	-	97	62.651	ENSMZEG00005023374	-	76	62.651	Maylandia_zebra
ENSLBEG00000025738	-	98	55.008	ENSMZEG00005004202	-	80	55.008	Maylandia_zebra
ENSLBEG00000025738	-	96	56.446	ENSMZEG00005023437	-	84	56.446	Maylandia_zebra
ENSLBEG00000025738	-	99	59.437	ENSMZEG00005023434	-	71	59.437	Maylandia_zebra
ENSLBEG00000025738	-	97	62.306	ENSMZEG00005004230	-	69	61.962	Maylandia_zebra
ENSLBEG00000025738	-	94	56.966	ENSMZEG00005026592	-	83	56.966	Maylandia_zebra
ENSLBEG00000025738	-	97	55.842	ENSMZEG00005023384	-	69	55.842	Maylandia_zebra
ENSLBEG00000025738	-	66	36.441	ENSMAUG00000014486	Nuggc	56	36.017	Mesocricetus_auratus
ENSLBEG00000025738	-	90	47.203	ENSONIG00000012332	-	90	47.203	Oreochromis_niloticus
ENSLBEG00000025738	-	97	57.143	ENSONIG00000005156	-	91	56.115	Oreochromis_niloticus
ENSLBEG00000025738	-	87	50.558	ENSONIG00000015367	-	90	48.966	Oreochromis_niloticus
ENSLBEG00000025738	-	97	54.424	ENSONIG00000017112	-	92	54.424	Oreochromis_niloticus
ENSLBEG00000025738	-	97	53.596	ENSPFOG00000006073	-	71	53.596	Poecilia_formosa
ENSLBEG00000025738	-	99	53.115	ENSPLAG00000016480	-	71	53.626	Poecilia_latipinna
ENSLBEG00000025738	-	90	54.529	ENSPMEG00000014636	-	83	54.529	Poecilia_mexicana
ENSLBEG00000025738	-	94	60.177	ENSPREG00000007347	-	97	60.177	Poecilia_reticulata
ENSLBEG00000025738	-	86	60.895	ENSPREG00000009634	-	80	60.895	Poecilia_reticulata
ENSLBEG00000025738	-	97	58.733	ENSPNYG00000002532	-	75	58.390	Pundamilia_nyererei
ENSLBEG00000025738	-	90	36.300	ENSPNAG00000003204	-	76	36.615	Pygocentrus_nattereri
ENSLBEG00000025738	-	68	45.763	ENSRBIG00000043902	NUGGC	59	45.763	Rhinopithecus_bieti
ENSLBEG00000025738	-	68	46.269	ENSSBOG00000028930	NUGGC	57	46.269	Saimiri_boliviensis_boliviensis
ENSLBEG00000025738	-	99	32.203	ENSSFOG00015023994	-	69	32.569	Scleropages_formosus
ENSLBEG00000025738	-	97	60.788	ENSSMAG00000015947	nuggc.3	70	61.130	Scophthalmus_maximus
ENSLBEG00000025738	-	77	63.951	ENSSDUG00000010293	-	78	63.951	Seriola_dumerili
ENSLBEG00000025738	-	97	54.636	ENSSPAG00000013498	-	79	54.305	Stegastes_partitus
ENSLBEG00000025738	-	97	63.345	ENSSPAG00000014020	-	75	63.682	Stegastes_partitus