EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000025798 (Gene tree)
Gene ID: 109997928
Gene Symbol: zgc:101559
Alias: -
Full Name: ras-related protein Rab-33B-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 3685 bases
Position: chrFKLU01000450.1:60961-64645
Accession: 109997928
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000034278	MMR_HSR1	PF01926.23	7.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000035760	-	2732	XM_020652597	ENSLBEP00000034278	234 (aa)	XP_020508253	UPI0009B33B17

Gene Model

Click here to download ENSLBEG00000025798's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000025798's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000025798	zgc:101559	79	67.204	ENSLBEG00000026777	rab33ba	81	67.204
ENSLBEG00000025798	zgc:101559	71	39.157	ENSLBEG00000010408	-	73	39.157
ENSLBEG00000025798	zgc:101559	88	34.450	ENSLBEG00000018180	si:dkey-13a21.4	99	34.450
ENSLBEG00000025798	zgc:101559	77	36.667	ENSLBEG00000001905	hrasb	93	36.464
ENSLBEG00000025798	zgc:101559	77	45.856	ENSLBEG00000027781	rab1ab	84	45.856
ENSLBEG00000025798	zgc:101559	53	44.800	ENSLBEG00000027819	rab34b	62	44.800
ENSLBEG00000025798	zgc:101559	85	35.437	ENSLBEG00000001796	RAB7A	97	35.437
ENSLBEG00000025798	zgc:101559	75	49.744	ENSLBEG00000018063	-	88	48.341
ENSLBEG00000025798	zgc:101559	74	32.370	ENSLBEG00000025705	si:ch73-116o1.2	81	32.370
ENSLBEG00000025798	zgc:101559	80	38.298	ENSLBEG00000022630	-	84	38.298
ENSLBEG00000025798	zgc:101559	84	36.634	ENSLBEG00000013463	rab15	91	36.634
ENSLBEG00000025798	zgc:101559	73	39.181	ENSLBEG00000004128	rab5c	75	39.181
ENSLBEG00000025798	zgc:101559	51	30.579	ENSLBEG00000013638	arl4aa	65	30.579
ENSLBEG00000025798	zgc:101559	74	40.462	ENSLBEG00000006087	rab11ba	79	40.462
ENSLBEG00000025798	zgc:101559	63	41.216	ENSLBEG00000026989	RAB15	68	41.216
ENSLBEG00000025798	zgc:101559	78	40.206	ENSLBEG00000003235	rab22a	96	40.206
ENSLBEG00000025798	zgc:101559	64	42.953	ENSLBEG00000003748	rab6a	71	42.953
ENSLBEG00000025798	zgc:101559	82	35.567	ENSLBEG00000027539	-	86	35.567
ENSLBEG00000025798	zgc:101559	63	42.857	ENSLBEG00000005861	rab18a	68	42.857
ENSLBEG00000025798	zgc:101559	66	33.758	ENSLBEG00000005128	-	70	33.758
ENSLBEG00000025798	zgc:101559	65	35.294	ENSLBEG00000014885	rheb	82	35.294
ENSLBEG00000025798	zgc:101559	66	32.278	ENSLBEG00000028391	dnajc27	58	32.278
ENSLBEG00000025798	zgc:101559	74	35.057	ENSLBEG00000028450	kras	87	37.059
ENSLBEG00000025798	zgc:101559	70	45.732	ENSLBEG00000005791	-	74	45.732
ENSLBEG00000025798	zgc:101559	76	47.458	ENSLBEG00000001618	rab35b	99	41.748
ENSLBEG00000025798	zgc:101559	83	34.500	ENSLBEG00000006152	-	96	34.500
ENSLBEG00000025798	zgc:101559	74	41.040	ENSLBEG00000015248	rab11bb	78	41.040
ENSLBEG00000025798	zgc:101559	67	43.396	ENSLBEG00000001313	RAB39B	74	43.396
ENSLBEG00000025798	zgc:101559	71	40.120	ENSLBEG00000026790	-	75	40.120
ENSLBEG00000025798	zgc:101559	72	35.227	ENSLBEG00000016218	rasl11a	77	33.663
ENSLBEG00000025798	zgc:101559	85	33.971	ENSLBEG00000003101	rab4a	96	33.971
ENSLBEG00000025798	zgc:101559	74	38.728	ENSLBEG00000013756	rab12	70	38.286
ENSLBEG00000025798	zgc:101559	77	45.304	ENSLBEG00000028426	RAB1A	84	45.304
ENSLBEG00000025798	zgc:101559	58	33.333	ENSLBEG00000000119	rras2	72	33.333
ENSLBEG00000025798	zgc:101559	77	45.304	ENSLBEG00000007681	si:dkey-16l2.16	85	45.000
ENSLBEG00000025798	zgc:101559	59	32.374	ENSLBEG00000003644	rabl2	60	32.374
ENSLBEG00000025798	zgc:101559	73	40.351	ENSLBEG00000002516	rab5aa	73	40.351
ENSLBEG00000025798	zgc:101559	62	31.757	ENSLBEG00000027628	si:cabz01085950.1	71	31.757
ENSLBEG00000025798	zgc:101559	79	34.872	ENSLBEG00000019372	rab6bb	91	34.872
ENSLBEG00000025798	zgc:101559	78	40.110	ENSLBEG00000026857	rab11a	84	40.110
ENSLBEG00000025798	zgc:101559	68	32.121	ENSLBEG00000020868	rasl11b	65	32.121
ENSLBEG00000025798	zgc:101559	71	40.719	ENSLBEG00000019435	rab14	75	40.719
ENSLBEG00000025798	zgc:101559	93	56.682	ENSLBEG00000014427	rab33a	92	58.454
ENSLBEG00000025798	zgc:101559	81	37.037	ENSLBEG00000002367	rab25a	86	37.037
ENSLBEG00000025798	zgc:101559	70	45.732	ENSLBEG00000027226	-	67	45.732
ENSLBEG00000025798	zgc:101559	70	42.683	ENSLBEG00000026779	rab13	80	42.683
ENSLBEG00000025798	zgc:101559	69	35.503	ENSLBEG00000011478	rab9b	77	35.503
ENSLBEG00000025798	zgc:101559	78	37.363	ENSLBEG00000016417	rab11al	83	37.363
ENSLBEG00000025798	zgc:101559	72	32.948	ENSLBEG00000005018	rab32b	80	32.948
ENSLBEG00000025798	zgc:101559	64	42.953	ENSLBEG00000008746	RAB41	70	42.953
ENSLBEG00000025798	zgc:101559	74	39.306	ENSLBEG00000005981	-	77	39.306
ENSLBEG00000025798	zgc:101559	76	48.315	ENSLBEG00000001146	rab30	83	48.315
ENSLBEG00000025798	zgc:101559	77	44.751	ENSLBEG00000021040	rab1ba	85	44.751
ENSLBEG00000025798	zgc:101559	85	31.818	ENSLBEG00000003132	rras	93	31.818
ENSLBEG00000025798	zgc:101559	83	34.500	ENSLBEG00000018812	RAB29	96	34.500
ENSLBEG00000025798	zgc:101559	64	40.940	ENSLBEG00000026930	rab6ba	71	40.940
ENSLBEG00000025798	zgc:101559	63	40.667	ENSLBEG00000002926	si:dkey-34d22.5	67	40.667
ENSLBEG00000025798	zgc:101559	81	40.212	ENSLBEG00000016446	rab25b	88	40.212
ENSLBEG00000025798	zgc:101559	80	36.170	ENSLBEG00000001193	rab42a	82	36.170
ENSLBEG00000025798	zgc:101559	70	41.718	ENSLBEG00000020796	rab2a	85	41.718
ENSLBEG00000025798	zgc:101559	63	33.784	ENSLBEG00000019137	rhebl1	75	33.784
ENSLBEG00000025798	zgc:101559	71	34.337	ENSLBEG00000013176	rab23	71	36.486
ENSLBEG00000025798	zgc:101559	70	38.462	ENSLBEG00000017798	-	79	38.462
ENSLBEG00000025798	zgc:101559	63	42.857	ENSLBEG00000019428	rab18b	71	42.857
ENSLBEG00000025798	zgc:101559	74	41.040	ENSLBEG00000004172	-	79	41.040
ENSLBEG00000025798	zgc:101559	66	33.758	ENSLBEG00000020582	rab9a	77	33.758

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000025798	zgc:101559	100	88.034	ENSAPOG00000007503	zgc:101559	100	88.034	Acanthochromis_polyacanthus
ENSLBEG00000025798	zgc:101559	90	90.952	ENSACIG00000021459	zgc:101559	92	90.952	Amphilophus_citrinellus
ENSLBEG00000025798	zgc:101559	100	88.034	ENSAOCG00000024675	zgc:101559	100	88.034	Amphiprion_ocellaris
ENSLBEG00000025798	zgc:101559	100	88.034	ENSAPEG00000005176	zgc:101559	100	88.034	Amphiprion_percula
ENSLBEG00000025798	zgc:101559	100	85.470	ENSATEG00000007761	zgc:101559	100	85.470	Anabas_testudineus
ENSLBEG00000025798	zgc:101559	98	90.000	ENSACLG00000027006	zgc:101559	97	90.000	Astatotilapia_calliptera
ENSLBEG00000025798	zgc:101559	99	75.862	ENSAMXG00000040460	zgc:101559	94	75.862	Astyanax_mexicanus
ENSLBEG00000025798	zgc:101559	100	80.769	ENSCSEG00000006243	zgc:101559	100	80.769	Cynoglossus_semilaevis
ENSLBEG00000025798	zgc:101559	100	83.333	ENSCVAG00000019227	zgc:101559	100	83.333	Cyprinodon_variegatus
ENSLBEG00000025798	zgc:101559	100	75.745	ENSDARG00000003257	zgc:101559	100	75.745	Danio_rerio
ENSLBEG00000025798	zgc:101559	100	81.624	ENSFHEG00000011483	zgc:101559	100	81.624	Fundulus_heteroclitus
ENSLBEG00000025798	zgc:101559	91	80.751	ENSGMOG00000011665	zgc:101559	100	80.751	Gadus_morhua
ENSLBEG00000025798	zgc:101559	100	82.051	ENSGAFG00000021202	zgc:101559	100	82.051	Gambusia_affinis
ENSLBEG00000025798	zgc:101559	91	88.263	ENSGACG00000001725	zgc:101559	91	88.263	Gasterosteus_aculeatus
ENSLBEG00000025798	zgc:101559	100	89.316	ENSHBUG00000007827	zgc:101559	100	89.316	Haplochromis_burtoni
ENSLBEG00000025798	zgc:101559	100	76.271	ENSHCOG00000009133	zgc:101559	100	77.731	Hippocampus_comes
ENSLBEG00000025798	zgc:101559	100	70.940	ENSIPUG00000022394	zgc:101559	100	70.940	Ictalurus_punctatus
ENSLBEG00000025798	zgc:101559	100	81.702	ENSKMAG00000002862	zgc:101559	100	81.702	Kryptolebias_marmoratus
ENSLBEG00000025798	zgc:101559	86	64.677	ENSLACG00000011557	zgc:101559	87	64.677	Latimeria_chalumnae
ENSLBEG00000025798	zgc:101559	100	70.940	ENSLOCG00000005904	zgc:101559	99	70.940	Lepisosteus_oculatus
ENSLBEG00000025798	zgc:101559	100	88.462	ENSMAMG00000017431	zgc:101559	100	88.462	Mastacembelus_armatus
ENSLBEG00000025798	zgc:101559	100	89.316	ENSMZEG00005021778	zgc:101559	100	89.316	Maylandia_zebra
ENSLBEG00000025798	zgc:101559	100	85.043	ENSMMOG00000019779	zgc:101559	100	85.043	Mola_mola
ENSLBEG00000025798	zgc:101559	100	83.761	ENSMALG00000003712	zgc:101559	100	83.761	Monopterus_albus
ENSLBEG00000025798	zgc:101559	100	88.462	ENSNBRG00000002684	zgc:101559	100	88.462	Neolamprologus_brichardi
ENSLBEG00000025798	zgc:101559	100	89.316	ENSONIG00000006715	-	100	89.316	Oreochromis_niloticus
ENSLBEG00000025798	zgc:101559	100	83.761	ENSORLG00000030642	zgc:101559	100	83.761	Oryzias_latipes
ENSLBEG00000025798	zgc:101559	100	82.906	ENSORLG00020012685	zgc:101559	100	82.906	Oryzias_latipes_hni
ENSLBEG00000025798	zgc:101559	100	83.333	ENSORLG00015016047	zgc:101559	100	83.333	Oryzias_latipes_hsok
ENSLBEG00000025798	zgc:101559	100	85.043	ENSOMEG00000013128	zgc:101559	100	85.043	Oryzias_melastigma
ENSLBEG00000025798	zgc:101559	97	73.894	ENSPKIG00000013397	zgc:101559	95	73.894	Paramormyrops_kingsleyae
ENSLBEG00000025798	zgc:101559	100	83.761	ENSPFOG00000009101	-	100	83.761	Poecilia_formosa
ENSLBEG00000025798	zgc:101559	100	83.761	ENSPLAG00000020627	zgc:101559	100	83.761	Poecilia_latipinna
ENSLBEG00000025798	zgc:101559	100	83.761	ENSPMEG00000010152	zgc:101559	100	83.761	Poecilia_mexicana
ENSLBEG00000025798	zgc:101559	100	82.906	ENSPREG00000007017	zgc:101559	100	82.906	Poecilia_reticulata
ENSLBEG00000025798	zgc:101559	100	89.316	ENSPNYG00000012922	zgc:101559	100	89.316	Pundamilia_nyererei
ENSLBEG00000025798	zgc:101559	100	76.068	ENSPNAG00000017856	zgc:101559	100	76.068	Pygocentrus_nattereri
ENSLBEG00000025798	zgc:101559	99	72.532	ENSSFOG00015006175	zgc:101559	100	72.532	Scleropages_formosus
ENSLBEG00000025798	zgc:101559	99	84.549	ENSSMAG00000002229	zgc:101559	99	84.549	Scophthalmus_maximus
ENSLBEG00000025798	zgc:101559	100	89.744	ENSSDUG00000008151	zgc:101559	100	89.744	Seriola_dumerili
ENSLBEG00000025798	zgc:101559	100	88.889	ENSSLDG00000019214	zgc:101559	100	88.889	Seriola_lalandi_dorsalis
ENSLBEG00000025798	zgc:101559	100	88.034	ENSSPAG00000006404	zgc:101559	100	88.034	Stegastes_partitus
ENSLBEG00000025798	zgc:101559	100	83.333	ENSTRUG00000009903	zgc:101559	100	83.333	Takifugu_rubripes
ENSLBEG00000025798	zgc:101559	92	82.326	ENSTNIG00000015000	zgc:101559	93	81.279	Tetraodon_nigroviridis
ENSLBEG00000025798	zgc:101559	100	83.333	ENSXCOG00000018683	zgc:101559	100	83.333	Xiphophorus_couchianus
ENSLBEG00000025798	zgc:101559	100	83.761	ENSXMAG00000011171	zgc:101559	100	83.761	Xiphophorus_maculatus