EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000025803 (Gene tree)
Gene ID: 109982904
Gene Symbol: -
Alias: -
Full Name: GDNF-inducible zinc finger protein 1-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 5206 bases
Position: chrFKLU01000048.1:1908639-1913844
Accession: 109982904
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000034286	zf-C2H2	PF00096.26	3.9e-39	1	8
ENSLBEP00000034286	zf-C2H2	PF00096.26	3.9e-39	2	8
ENSLBEP00000034286	zf-C2H2	PF00096.26	3.9e-39	3	8
ENSLBEP00000034286	zf-C2H2	PF00096.26	3.9e-39	4	8
ENSLBEP00000034286	zf-C2H2	PF00096.26	3.9e-39	5	8
ENSLBEP00000034286	zf-C2H2	PF00096.26	3.9e-39	6	8
ENSLBEP00000034286	zf-C2H2	PF00096.26	3.9e-39	7	8
ENSLBEP00000034286	zf-C2H2	PF00096.26	3.9e-39	8	8
ENSLBEP00000034286	zf-met	PF12874.7	1.3e-10	1	2
ENSLBEP00000034286	zf-met	PF12874.7	1.3e-10	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000035768	-	2838	XM_020632370	ENSLBEP00000034286	834 (aa)	XP_020488026	UPI0009B4E3F1

Gene Model

Click here to download ENSLBEG00000025803's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000025803's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000025803	-	50	35.581	ENSLBEG00000022299	zbtb16b	62	35.581
ENSLBEG00000025803	-	66	39.640	ENSLBEG00000010933	-	94	39.640
ENSLBEG00000025803	-	64	33.500	ENSLBEG00000013197	PRDM15	51	33.500
ENSLBEG00000025803	-	68	32.544	ENSLBEG00000013821	hic2	96	32.544
ENSLBEG00000025803	-	53	44.643	ENSLBEG00000005307	znf236	68	44.643
ENSLBEG00000025803	-	86	38.839	ENSLBEG00000004860	zbtb24	59	38.839

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000025803	-	74	47.812	ENSG00000125812	GZF1	85	53.659	Homo_sapiens
ENSLBEG00000025803	-	72	72.315	ENSAPOG00000012930	GZF1	95	71.886	Acanthochromis_polyacanthus
ENSLBEG00000025803	-	72	44.888	ENSAMEG00000009853	GZF1	85	45.959	Ailuropoda_melanoleuca
ENSLBEG00000025803	-	97	67.931	ENSACIG00000004753	-	99	66.747	Amphilophus_citrinellus
ENSLBEG00000025803	-	70	71.652	ENSAOCG00000024275	GZF1	92	71.130	Amphiprion_ocellaris
ENSLBEG00000025803	-	99	69.870	ENSAPEG00000017195	GZF1	98	70.511	Amphiprion_percula
ENSLBEG00000025803	-	85	61.781	ENSATEG00000018374	GZF1	88	80.455	Anabas_testudineus
ENSLBEG00000025803	-	74	48.270	ENSANAG00000028240	GZF1	85	48.304	Aotus_nancymaae
ENSLBEG00000025803	-	98	68.252	ENSACLG00000025866	GZF1	97	69.212	Astatotilapia_calliptera
ENSLBEG00000025803	-	90	49.427	ENSAMXG00000017178	GZF1	89	47.941	Astyanax_mexicanus
ENSLBEG00000025803	-	74	48.346	ENSCJAG00000000733	GZF1	85	48.237	Callithrix_jacchus
ENSLBEG00000025803	-	72	47.528	ENSCAFG00000005142	GZF1	85	47.861	Canis_familiaris
ENSLBEG00000025803	-	72	48.636	ENSTSYG00000028054	GZF1	85	47.702	Carlito_syrichta
ENSLBEG00000025803	-	73	46.573	ENSCAPG00000002173	GZF1	85	46.805	Cavia_aperea
ENSLBEG00000025803	-	73	46.573	ENSCPOG00000010790	GZF1	85	46.805	Cavia_porcellus
ENSLBEG00000025803	-	74	47.642	ENSCCAG00000035601	GZF1	85	47.436	Cebus_capucinus
ENSLBEG00000025803	-	74	48.281	ENSCATG00000039279	GZF1	85	48.653	Cercocebus_atys
ENSLBEG00000025803	-	74	46.466	ENSCLAG00000014714	GZF1	86	46.749	Chinchilla_lanigera
ENSLBEG00000025803	-	74	48.125	ENSCSAG00000011054	GZF1	85	47.528	Chlorocebus_sabaeus
ENSLBEG00000025803	-	52	50.000	ENSCPBG00000023418	-	68	45.918	Chrysemys_picta_bellii
ENSLBEG00000025803	-	74	47.465	ENSCANG00000041260	GZF1	85	48.166	Colobus_angolensis_palliatus
ENSLBEG00000025803	-	82	44.398	ENSCGRG00001003944	Gzf1	82	49.606	Cricetulus_griseus_chok1gshd
ENSLBEG00000025803	-	82	44.398	ENSCGRG00000012721	Gzf1	82	49.606	Cricetulus_griseus_crigri
ENSLBEG00000025803	-	99	61.079	ENSCSEG00000002270	GZF1	98	60.652	Cynoglossus_semilaevis
ENSLBEG00000025803	-	99	58.534	ENSCVAG00000013068	-	99	58.824	Cyprinodon_variegatus
ENSLBEG00000025803	-	58	58.553	ENSELUG00000013581	GZF1	79	58.746	Esox_lucius
ENSLBEG00000025803	-	72	47.567	ENSFCAG00000006484	GZF1	85	48.050	Felis_catus
ENSLBEG00000025803	-	73	46.305	ENSFDAG00000019468	GZF1	89	46.533	Fukomys_damarensis
ENSLBEG00000025803	-	97	57.317	ENSFHEG00000020498	GZF1	99	57.561	Fundulus_heteroclitus
ENSLBEG00000025803	-	73	62.704	ENSGMOG00000011017	GZF1	100	62.582	Gadus_morhua
ENSLBEG00000025803	-	99	62.156	ENSGAFG00000008725	GZF1	99	62.275	Gambusia_affinis
ENSLBEG00000025803	-	73	71.870	ENSGACG00000012415	GZF1	99	87.245	Gasterosteus_aculeatus
ENSLBEG00000025803	-	74	48.125	ENSGGOG00000023248	GZF1	85	48.083	Gorilla_gorilla
ENSLBEG00000025803	-	98	69.073	ENSHBUG00000016502	-	99	69.073	Haplochromis_burtoni
ENSLBEG00000025803	-	73	46.235	ENSHGLG00000008891	GZF1	86	46.573	Heterocephalus_glaber_female
ENSLBEG00000025803	-	73	46.235	ENSHGLG00100015117	GZF1	86	46.573	Heterocephalus_glaber_male
ENSLBEG00000025803	-	97	53.894	ENSHCOG00000004326	GZF1	96	53.152	Hippocampus_comes
ENSLBEG00000025803	-	73	49.065	ENSSTOG00000009820	GZF1	85	48.804	Ictidomys_tridecemlineatus
ENSLBEG00000025803	-	73	47.806	ENSJJAG00000008172	Gzf1	85	48.243	Jaculus_jaculus
ENSLBEG00000025803	-	68	79.592	ENSKMAG00000001453	-	99	79.592	Kryptolebias_marmoratus
ENSLBEG00000025803	-	73	48.433	ENSLAFG00000002458	GZF1	99	44.878	Loxodonta_africana
ENSLBEG00000025803	-	74	48.292	ENSMFAG00000042408	GZF1	85	48.653	Macaca_fascicularis
ENSLBEG00000025803	-	74	48.281	ENSMMUG00000022387	GZF1	85	48.653	Macaca_mulatta
ENSLBEG00000025803	-	74	48.281	ENSMNEG00000033117	GZF1	85	48.019	Macaca_nemestrina
ENSLBEG00000025803	-	74	48.281	ENSMLEG00000036831	GZF1	85	48.019	Mandrillus_leucophaeus
ENSLBEG00000025803	-	97	66.626	ENSMAMG00000011931	-	96	66.667	Mastacembelus_armatus
ENSLBEG00000025803	-	98	68.982	ENSMZEG00005010711	-	99	68.982	Maylandia_zebra
ENSLBEG00000025803	-	71	48.933	ENSMAUG00000019656	Gzf1	99	49.091	Mesocricetus_auratus
ENSLBEG00000025803	-	73	48.212	ENSMICG00000046070	GZF1	85	47.152	Microcebus_murinus
ENSLBEG00000025803	-	72	46.890	ENSMOCG00000017816	Gzf1	86	47.209	Microtus_ochrogaster
ENSLBEG00000025803	-	95	65.668	ENSMMOG00000004395	-	100	65.586	Mola_mola
ENSLBEG00000025803	-	73	47.188	ENSMODG00000006238	GZF1	100	64.615	Monodelphis_domestica
ENSLBEG00000025803	-	73	47.582	MGP_CAROLIEiJ_G0024409	Gzf1	86	48.403	Mus_caroli
ENSLBEG00000025803	-	81	45.493	ENSMUSG00000027439	Gzf1	86	48.718	Mus_musculus
ENSLBEG00000025803	-	81	45.634	MGP_SPRETEiJ_G0025327	Gzf1	86	49.038	Mus_spretus
ENSLBEG00000025803	-	72	47.724	ENSMPUG00000001160	GZF1	76	49.280	Mustela_putorius_furo
ENSLBEG00000025803	-	73	43.656	ENSMLUG00000002194	GZF1	87	46.057	Myotis_lucifugus
ENSLBEG00000025803	-	73	49.214	ENSNGAG00000024012	Gzf1	85	48.792	Nannospalax_galili
ENSLBEG00000025803	-	72	61.353	ENSNBRG00000019987	GZF1	97	64.983	Neolamprologus_brichardi
ENSLBEG00000025803	-	74	48.125	ENSNLEG00000011565	GZF1	85	47.867	Nomascus_leucogenys
ENSLBEG00000025803	-	72	47.930	ENSOPRG00000004697	GZF1	98	43.445	Ochotona_princeps
ENSLBEG00000025803	-	84	34.683	ENSODEG00000013020	GZF1	84	42.903	Octodon_degus
ENSLBEG00000025803	-	73	70.867	ENSONIG00000000989	GZF1	100	70.164	Oreochromis_niloticus
ENSLBEG00000025803	-	74	46.841	ENSOCUG00000025214	GZF1	85	47.611	Oryctolagus_cuniculus
ENSLBEG00000025803	-	99	57.688	ENSORLG00000010006	-	100	57.857	Oryzias_latipes
ENSLBEG00000025803	-	99	57.688	ENSORLG00020001395	-	100	58.026	Oryzias_latipes_hni
ENSLBEG00000025803	-	64	66.667	ENSORLG00015015364	GZF1	100	57.857	Oryzias_latipes_hsok
ENSLBEG00000025803	-	74	47.969	ENSPPAG00000028487	GZF1	85	48.077	Pan_paniscus
ENSLBEG00000025803	-	72	47.724	ENSPPRG00000010040	GZF1	85	48.050	Panthera_pardus
ENSLBEG00000025803	-	72	48.019	ENSPTIG00000019328	GZF1	85	48.050	Panthera_tigris_altaica
ENSLBEG00000025803	-	74	47.969	ENSPTRG00000013320	GZF1	85	48.166	Pan_troglodytes
ENSLBEG00000025803	-	74	48.438	ENSPANG00000017419	GZF1	85	48.177	Papio_anubis
ENSLBEG00000025803	-	90	50.839	ENSPKIG00000003781	GZF1	91	50.260	Paramormyrops_kingsleyae
ENSLBEG00000025803	-	73	48.607	ENSPSIG00000014455	GZF1	85	48.889	Pelodiscus_sinensis
ENSLBEG00000025803	-	53	49.686	ENSPSIG00000014208	-	65	49.249	Pelodiscus_sinensis
ENSLBEG00000025803	-	83	57.756	ENSPMGG00000003778	-	98	48.473	Periophthalmus_magnuspinnatus
ENSLBEG00000025803	-	84	44.536	ENSPEMG00000011285	Gzf1	98	44.505	Peromyscus_maniculatus_bairdii
ENSLBEG00000025803	-	85	44.133	ENSPCIG00000013803	GZF1	86	47.030	Phascolarctos_cinereus
ENSLBEG00000025803	-	99	62.425	ENSPFOG00000002393	GZF1	100	66.337	Poecilia_formosa
ENSLBEG00000025803	-	99	55.852	ENSPLAG00000005232	GZF1	93	66.230	Poecilia_latipinna
ENSLBEG00000025803	-	99	56.468	ENSPMEG00000020017	-	99	56.879	Poecilia_mexicana
ENSLBEG00000025803	-	99	53.483	ENSPREG00000016398	GZF1	99	54.782	Poecilia_reticulata
ENSLBEG00000025803	-	52	67.192	ENSPPYG00000010766	GZF1	72	65.653	Pongo_abelii
ENSLBEG00000025803	-	68	46.309	ENSPCAG00000007544	GZF1	99	46.477	Procavia_capensis
ENSLBEG00000025803	-	73	47.826	ENSPCOG00000024180	GZF1	85	47.536	Propithecus_coquereli
ENSLBEG00000025803	-	59	74.474	ENSPNYG00000000788	-	86	74.474	Pundamilia_nyererei
ENSLBEG00000025803	-	74	48.758	ENSRBIG00000028715	GZF1	85	48.077	Rhinopithecus_bieti
ENSLBEG00000025803	-	74	48.442	ENSRROG00000030533	GZF1	85	48.485	Rhinopithecus_roxellana
ENSLBEG00000025803	-	74	47.642	ENSSBOG00000018893	GZF1	85	47.276	Saimiri_boliviensis_boliviensis
ENSLBEG00000025803	-	73	46.994	ENSSHAG00000009367	GZF1	85	47.134	Sarcophilus_harrisii
ENSLBEG00000025803	-	91	47.748	ENSSFOG00015008631	gzf1	93	46.301	Scleropages_formosus
ENSLBEG00000025803	-	99	71.564	ENSSDUG00000008186	GZF1	99	70.379	Seriola_dumerili
ENSLBEG00000025803	-	99	71.667	ENSSLDG00000002382	GZF1	99	71.106	Seriola_lalandi_dorsalis
ENSLBEG00000025803	-	52	68.317	ENSSARG00000010285	GZF1	57	70.629	Sorex_araneus
ENSLBEG00000025803	-	72	38.534	ENSSPUG00000004147	GZF1	85	44.745	Sphenodon_punctatus
ENSLBEG00000025803	-	99	70.111	ENSSPAG00000011759	GZF1	99	69.926	Stegastes_partitus
ENSLBEG00000025803	-	52	54.566	ENSSSCG00000007117	GZF1	65	56.373	Sus_scrofa
ENSLBEG00000025803	-	98	60.193	ENSTRUG00000006128	-	98	60.072	Takifugu_rubripes
ENSLBEG00000025803	-	73	63.651	ENSTNIG00000010722	GZF1	100	62.787	Tetraodon_nigroviridis
ENSLBEG00000025803	-	72	47.444	ENSTTRG00000011345	GZF1	85	47.125	Tursiops_truncatus
ENSLBEG00000025803	-	72	48.000	ENSUMAG00000004065	GZF1	85	49.365	Ursus_maritimus
ENSLBEG00000025803	-	72	46.910	ENSVVUG00000012086	GZF1	85	47.861	Vulpes_vulpes
ENSLBEG00000025803	-	99	62.350	ENSXMAG00000023249	GZF1	100	62.470	Xiphophorus_maculatus