EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000026019 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 7285 bases
Position: chrFKLU01000170.1:839445-846729
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000034617	zf-C2H2	PF00096.26	6.7e-22	1	3
ENSLBEP00000034617	zf-C2H2	PF00096.26	6.7e-22	2	3
ENSLBEP00000034617	zf-C2H2	PF00096.26	6.7e-22	3	3
ENSLBEP00000034617	zf-met	PF12874.7	5.2e-10	1	2
ENSLBEP00000034617	zf-met	PF12874.7	5.2e-10	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000036103	-	1281	-	ENSLBEP00000034617	426 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000026019's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000026019's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000026019	-	79	36.290	ENSLBEG00000001920	-	90	35.032
ENSLBEG00000026019	-	54	33.835	ENSLBEG00000014195	-	58	33.835
ENSLBEG00000026019	-	52	43.590	ENSLBEG00000011588	-	70	43.590
ENSLBEG00000026019	-	50	37.912	ENSLBEG00000000369	-	92	37.912
ENSLBEG00000026019	-	79	35.795	ENSLBEG00000011006	-	82	35.795
ENSLBEG00000026019	-	75	42.857	ENSLBEG00000005307	znf236	61	42.857
ENSLBEG00000026019	-	50	44.615	ENSLBEG00000010278	-	90	46.535
ENSLBEG00000026019	-	50	39.011	ENSLBEG00000000373	-	79	39.011
ENSLBEG00000026019	-	58	38.333	ENSLBEG00000020747	-	88	38.983
ENSLBEG00000026019	-	51	39.024	ENSLBEG00000004833	-	75	39.024
ENSLBEG00000026019	-	50	39.130	ENSLBEG00000011091	si:cabz01071911.3	94	41.463
ENSLBEG00000026019	-	55	38.667	ENSLBEG00000011465	-	88	41.667
ENSLBEG00000026019	-	51	43.000	ENSLBEG00000008909	-	97	43.000
ENSLBEG00000026019	-	54	43.182	ENSLBEG00000013570	-	97	45.038
ENSLBEG00000026019	-	66	41.250	ENSLBEG00000008689	-	84	38.298
ENSLBEG00000026019	-	55	40.789	ENSLBEG00000024737	-	94	40.789
ENSLBEG00000026019	-	53	33.508	ENSLBEG00000014676	-	79	33.508
ENSLBEG00000026019	-	50	39.011	ENSLBEG00000007251	-	83	39.011
ENSLBEG00000026019	-	64	45.000	ENSLBEG00000015694	-	86	45.000
ENSLBEG00000026019	-	51	46.847	ENSLBEG00000014211	-	94	41.000
ENSLBEG00000026019	-	59	36.111	ENSLBEG00000013235	-	93	35.519
ENSLBEG00000026019	-	72	35.838	ENSLBEG00000005715	-	85	35.802

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000026019	-	74	43.956	ENSACIG00000017050	-	99	44.186	Amphilophus_citrinellus
ENSLBEG00000026019	-	61	36.000	ENSACIG00000013750	-	76	40.541	Amphilophus_citrinellus
ENSLBEG00000026019	-	52	39.785	ENSACLG00000024308	-	97	44.633	Astatotilapia_calliptera
ENSLBEG00000026019	-	53	40.761	ENSAMXG00000036915	-	95	40.761	Astyanax_mexicanus
ENSLBEG00000026019	-	60	39.884	ENSCSEG00000008502	-	82	39.884	Cynoglossus_semilaevis
ENSLBEG00000026019	-	52	39.548	ENSCSEG00000004348	-	79	39.548	Cynoglossus_semilaevis
ENSLBEG00000026019	-	54	41.808	ENSCSEG00000008539	-	73	41.808	Cynoglossus_semilaevis
ENSLBEG00000026019	-	50	43.210	ENSCSEG00000003757	-	98	47.436	Cynoglossus_semilaevis
ENSLBEG00000026019	-	54	42.169	ENSCVAG00000007073	-	72	46.154	Cyprinodon_variegatus
ENSLBEG00000026019	-	51	45.794	ENSCVAG00000022991	-	93	45.794	Cyprinodon_variegatus
ENSLBEG00000026019	-	51	38.983	ENSEBUG00000006080	-	91	38.983	Eptatretus_burgeri
ENSLBEG00000026019	-	60	36.087	ENSEBUG00000007470	-	90	38.043	Eptatretus_burgeri
ENSLBEG00000026019	-	51	35.870	ENSEBUG00000008107	-	97	35.870	Eptatretus_burgeri
ENSLBEG00000026019	-	77	37.430	ENSEBUG00000007305	-	88	37.430	Eptatretus_burgeri
ENSLBEG00000026019	-	66	41.111	ENSELUG00000005912	-	91	41.111	Esox_lucius
ENSLBEG00000026019	-	53	38.994	ENSELUG00000019204	-	87	39.535	Esox_lucius
ENSLBEG00000026019	-	62	47.059	ENSELUG00000018405	-	93	40.449	Esox_lucius
ENSLBEG00000026019	-	67	30.097	ENSELUG00000020017	-	81	30.097	Esox_lucius
ENSLBEG00000026019	-	62	45.000	ENSELUG00000013245	-	93	45.000	Esox_lucius
ENSLBEG00000026019	-	64	42.969	ENSELUG00000013094	-	95	50.820	Esox_lucius
ENSLBEG00000026019	-	63	48.684	ENSFHEG00000013794	-	93	41.341	Fundulus_heteroclitus
ENSLBEG00000026019	-	51	37.714	ENSGAGG00000006846	-	87	40.110	Gopherus_agassizii
ENSLBEG00000026019	-	56	46.053	ENSHBUG00000017864	-	96	46.053	Haplochromis_burtoni
ENSLBEG00000026019	-	52	39.548	ENSHCOG00000012617	-	84	39.548	Hippocampus_comes
ENSLBEG00000026019	-	52	38.857	ENSHCOG00000001252	-	95	38.857	Hippocampus_comes
ENSLBEG00000026019	-	58	38.378	ENSIPUG00000021441	-	91	38.378	Ictalurus_punctatus
ENSLBEG00000026019	-	54	39.560	ENSKMAG00000000795	-	99	39.560	Kryptolebias_marmoratus
ENSLBEG00000026019	-	56	32.692	ENSMMOG00000011184	-	77	31.915	Mola_mola
ENSLBEG00000026019	-	50	41.270	ENSMALG00000008786	-	92	41.270	Monopterus_albus
ENSLBEG00000026019	-	63	46.250	ENSMALG00000012043	-	95	46.250	Monopterus_albus
ENSLBEG00000026019	-	66	37.853	ENSNBRG00000016550	-	85	37.853	Neolamprologus_brichardi
ENSLBEG00000026019	-	51	49.412	ENSONIG00000008188	-	100	49.412	Oreochromis_niloticus
ENSLBEG00000026019	-	52	58.491	ENSONIG00000007811	-	99	58.491	Oreochromis_niloticus
ENSLBEG00000026019	-	50	41.758	ENSORLG00000024174	-	82	44.000	Oryzias_latipes
ENSLBEG00000026019	-	66	43.407	ENSORLG00015012187	-	90	43.407	Oryzias_latipes_hsok
ENSLBEG00000026019	-	63	40.678	ENSOMEG00000019853	-	91	40.678	Oryzias_melastigma
ENSLBEG00000026019	-	50	44.915	ENSPKIG00000009111	-	85	52.381	Paramormyrops_kingsleyae
ENSLBEG00000026019	-	60	42.391	ENSPMGG00000010453	-	91	41.765	Periophthalmus_magnuspinnatus
ENSLBEG00000026019	-	52	47.959	ENSPMGG00000006070	-	85	47.959	Periophthalmus_magnuspinnatus
ENSLBEG00000026019	-	52	43.407	ENSPFOG00000005449	-	99	43.407	Poecilia_formosa
ENSLBEG00000026019	-	63	46.154	ENSPLAG00000006828	-	97	46.154	Poecilia_latipinna
ENSLBEG00000026019	-	50	50.980	ENSPNYG00000021217	-	83	36.508	Pundamilia_nyererei
ENSLBEG00000026019	-	50	38.298	ENSPNYG00000000700	-	52	38.298	Pundamilia_nyererei
ENSLBEG00000026019	-	52	39.873	ENSPNAG00000005857	-	96	39.873	Pygocentrus_nattereri
ENSLBEG00000026019	-	50	37.640	ENSRNOG00000024056	Zfp17	72	37.640	Rattus_norvegicus
ENSLBEG00000026019	-	52	33.898	ENSSFOG00015017155	-	84	33.898	Scleropages_formosus
ENSLBEG00000026019	-	59	43.902	ENSSMAG00000015347	-	90	42.308	Scophthalmus_maximus
ENSLBEG00000026019	-	50	41.808	ENSSDUG00000020805	-	96	41.808	Seriola_dumerili
ENSLBEG00000026019	-	50	39.831	ENSSDUG00000013335	-	57	39.831	Seriola_dumerili
ENSLBEG00000026019	-	55	40.782	ENSSDUG00000007336	-	89	45.570	Seriola_dumerili
ENSLBEG00000026019	-	54	41.899	ENSSLDG00000005850	-	89	54.545	Seriola_lalandi_dorsalis
ENSLBEG00000026019	-	55	41.209	ENSSLDG00000016317	-	86	41.209	Seriola_lalandi_dorsalis
ENSLBEG00000026019	-	55	35.398	ENSTNIG00000005479	-	99	36.667	Tetraodon_nigroviridis
ENSLBEG00000026019	-	54	46.316	ENSXETG00000023643	znf484	99	45.679	Xenopus_tropicalis
ENSLBEG00000026019	-	55	40.341	ENSXETG00000002717	-	99	40.341	Xenopus_tropicalis
ENSLBEG00000026019	-	66	42.466	ENSXCOG00000007957	-	94	42.466	Xiphophorus_couchianus
ENSLBEG00000026019	-	54	42.045	ENSXMAG00000026679	-	97	44.565	Xiphophorus_maculatus
ENSLBEG00000026019	-	81	45.263	ENSXMAG00000020039	-	92	47.170	Xiphophorus_maculatus
ENSLBEG00000026019	-	50	41.975	ENSXMAG00000025344	-	88	48.980	Xiphophorus_maculatus
ENSLBEG00000026019	-	55	41.808	ENSXMAG00000027906	-	95	45.714	Xiphophorus_maculatus
ENSLBEG00000026019	-	81	39.320	ENSXMAG00000026477	-	87	42.331	Xiphophorus_maculatus