EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000026060 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 5268 bases
Position: chrFKLU01001029.1:60873-66140
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000034675	zf-C2H2	PF00096.26	2.5e-22	1	4
ENSLBEP00000034675	zf-C2H2	PF00096.26	2.5e-22	2	4
ENSLBEP00000034675	zf-C2H2	PF00096.26	2.5e-22	3	4
ENSLBEP00000034675	zf-C2H2	PF00096.26	2.5e-22	4	4
ENSLBEP00000034675	zf-met	PF12874.7	0.00014	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000036162	-	2267	-	ENSLBEP00000034675	459 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000026060's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000026060's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000026060	-	64	99.315	ENSLBEG00000009663	-	92	99.315
ENSLBEG00000026060	-	66	46.875	ENSLBEG00000011313	-	84	46.875
ENSLBEG00000026060	-	64	54.426	ENSLBEG00000026457	-	97	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000026060	-	99	52.268	ENSAPOG00000022184	-	99	52.268	Acanthochromis_polyacanthus
ENSLBEG00000026060	-	98	38.043	ENSAPOG00000008360	-	97	38.043	Acanthochromis_polyacanthus
ENSLBEG00000026060	-	99	50.753	ENSAOCG00000022836	-	99	50.968	Amphiprion_ocellaris
ENSLBEG00000026060	-	99	50.214	ENSAPEG00000003776	-	99	50.427	Amphiprion_percula
ENSLBEG00000026060	-	99	64.147	ENSATEG00000014684	-	87	86.916	Anabas_testudineus
ENSLBEG00000026060	-	98	43.704	ENSACLG00000015462	-	100	43.704	Astatotilapia_calliptera
ENSLBEG00000026060	-	51	53.947	ENSCVAG00000010887	-	87	53.030	Cyprinodon_variegatus
ENSLBEG00000026060	-	77	46.789	ENSFHEG00000013228	-	93	46.789	Fundulus_heteroclitus
ENSLBEG00000026060	-	99	52.298	ENSGAFG00000018506	-	99	52.298	Gambusia_affinis
ENSLBEG00000026060	-	98	50.000	ENSGAFG00000021013	-	95	50.000	Gambusia_affinis
ENSLBEG00000026060	-	98	43.704	ENSHBUG00000019377	-	100	45.098	Haplochromis_burtoni
ENSLBEG00000026060	-	99	53.747	ENSKMAG00000000427	-	97	54.176	Kryptolebias_marmoratus
ENSLBEG00000026060	-	99	47.222	ENSKMAG00000015304	-	61	47.222	Kryptolebias_marmoratus
ENSLBEG00000026060	-	98	43.704	ENSMZEG00005018502	-	100	43.704	Maylandia_zebra
ENSLBEG00000026060	-	99	46.602	ENSMALG00000011756	-	81	49.020	Monopterus_albus
ENSLBEG00000026060	-	98	45.872	ENSNBRG00000024179	-	100	49.074	Neolamprologus_brichardi
ENSLBEG00000026060	-	99	50.000	ENSOMEG00000019811	-	99	50.000	Oryzias_melastigma
ENSLBEG00000026060	-	97	44.643	ENSPFOG00000023496	-	96	44.643	Poecilia_formosa
ENSLBEG00000026060	-	99	52.183	ENSPLAG00000011958	-	98	52.183	Poecilia_latipinna
ENSLBEG00000026060	-	99	52.609	ENSPMEG00000006760	-	98	52.711	Poecilia_mexicana
ENSLBEG00000026060	-	99	52.298	ENSPREG00000021124	-	97	52.183	Poecilia_reticulata
ENSLBEG00000026060	-	50	55.357	ENSSFOG00015006083	-	60	55.357	Scleropages_formosus
ENSLBEG00000026060	-	99	50.980	ENSSLDG00000021278	-	60	50.980	Seriola_lalandi_dorsalis
ENSLBEG00000026060	-	73	50.729	ENSSPAG00000008950	-	74	86.022	Stegastes_partitus
ENSLBEG00000026060	-	99	38.043	ENSSPAG00000018010	-	99	38.043	Stegastes_partitus
ENSLBEG00000026060	-	98	44.643	ENSXMAG00000005609	-	96	44.643	Xiphophorus_maculatus