EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000026223 (Gene tree)
Gene ID: 109999018
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein Musashi homolog 2-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 47716 bases
Position: chrFKLU01000527.1:77223-124938
Accession: 109999018
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000034904	RRM_1	PF00076.22	3.6e-18	1	2
ENSLBEP00000034904	RRM_1	PF00076.22	3.6e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000036393	-	5688	XM_020653959	ENSLBEP00000034904	341 (aa)	XP_020509615	-

Gene Model

Click here to download ENSLBEG00000026223's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000026223's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000026223	-	100	72.928	ENSLBEG00000007061	msi2a	95	74.309
ENSLBEG00000026223	-	100	55.263	ENSLBEG00000008789	MSI1	94	57.558
ENSLBEG00000026223	-	100	54.386	ENSLBEG00000001375	-	94	55.814

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000026223	-	100	68.915	ENSG00000153944	MSI2	95	84.028	Homo_sapiens
ENSLBEG00000026223	-	100	86.528	ENSAPOG00000001658	msi2a	93	86.528	Acanthochromis_polyacanthus
ENSLBEG00000026223	-	100	68.915	ENSAMEG00000002697	MSI2	99	68.915	Ailuropoda_melanoleuca
ENSLBEG00000026223	-	100	77.233	ENSACIG00000009475	msi2a	97	77.233	Amphilophus_citrinellus
ENSLBEG00000026223	-	100	66.862	ENSAPEG00000007706	msi2a	97	67.742	Amphiprion_percula
ENSLBEG00000026223	-	100	86.528	ENSATEG00000010498	msi2a	93	86.528	Anabas_testudineus
ENSLBEG00000026223	-	100	68.035	ENSATEG00000003301	-	100	68.035	Anabas_testudineus
ENSLBEG00000026223	-	97	70.474	ENSACAG00000005452	MSI2	88	70.474	Anolis_carolinensis
ENSLBEG00000026223	-	100	64.516	ENSANAG00000037827	MSI2	91	85.052	Aotus_nancymaae
ENSLBEG00000026223	-	100	86.010	ENSACLG00000007752	msi2a	93	86.010	Astatotilapia_calliptera
ENSLBEG00000026223	-	100	79.009	ENSAMXG00000032796	msi2a	95	79.300	Astyanax_mexicanus
ENSLBEG00000026223	-	100	78.947	ENSAMXG00000010474	msi2b	92	87.565	Astyanax_mexicanus
ENSLBEG00000026223	-	100	65.982	ENSBTAG00000004406	MSI2	82	86.010	Bos_taurus
ENSLBEG00000026223	-	54	59.091	WBGene00003423	msi-1	71	59.091	Caenorhabditis_elegans
ENSLBEG00000026223	-	100	64.516	ENSCJAG00000013998	MSI2	91	85.052	Callithrix_jacchus
ENSLBEG00000026223	-	100	68.915	ENSCAFG00020025620	MSI2	73	83.333	Canis_lupus_dingo
ENSLBEG00000026223	-	83	85.514	ENSCHIG00000016580	MSI2	94	65.396	Capra_hircus
ENSLBEG00000026223	-	100	61.877	ENSCPOG00000034042	MSI2	98	61.877	Cavia_porcellus
ENSLBEG00000026223	-	100	64.516	ENSCCAG00000033927	MSI2	91	85.052	Cebus_capucinus
ENSLBEG00000026223	-	100	64.516	ENSCATG00000040879	MSI2	91	85.052	Cercocebus_atys
ENSLBEG00000026223	-	100	68.915	ENSCLAG00000014325	MSI2	94	68.915	Chinchilla_lanigera
ENSLBEG00000026223	-	100	64.516	ENSCSAG00000005633	MSI2	94	64.516	Chlorocebus_sabaeus
ENSLBEG00000026223	-	64	70.659	ENSCHOG00000008660	MSI2	78	70.659	Choloepus_hoffmanni
ENSLBEG00000026223	-	97	72.571	ENSCPBG00000009942	MSI2	96	72.571	Chrysemys_picta_bellii
ENSLBEG00000026223	-	50	67.033	ENSCSAVG00000010397	-	74	63.500	Ciona_savignyi
ENSLBEG00000026223	-	100	68.915	ENSCANG00000036414	MSI2	91	85.052	Colobus_angolensis_palliatus
ENSLBEG00000026223	-	83	85.514	ENSCGRG00001013330	Msi2	94	64.620	Cricetulus_griseus_chok1gshd
ENSLBEG00000026223	-	100	68.713	ENSCGRG00000003141	Msi2	100	68.713	Cricetulus_griseus_crigri
ENSLBEG00000026223	-	100	78.505	ENSCSEG00000003266	-	92	78.505	Cynoglossus_semilaevis
ENSLBEG00000026223	-	75	51.362	ENSCSEG00000013557	msi2a	83	51.362	Cynoglossus_semilaevis
ENSLBEG00000026223	-	100	86.528	ENSCVAG00000017075	msi2a	93	86.528	Cyprinodon_variegatus
ENSLBEG00000026223	-	100	73.757	ENSDARG00000032614	msi2b	99	89.062	Danio_rerio
ENSLBEG00000026223	-	100	77.193	ENSDARG00000033901	msi2a	95	77.193	Danio_rerio
ENSLBEG00000026223	-	100	64.516	ENSDNOG00000014501	MSI2	100	64.516	Dasypus_novemcinctus
ENSLBEG00000026223	-	74	76.154	ENSDORG00000005394	Msi2	84	52.918	Dipodomys_ordii
ENSLBEG00000026223	-	100	47.887	FBgn0260943	Rbp6	100	46.689	Drosophila_melanogaster
ENSLBEG00000026223	-	99	52.663	ENSEBUG00000006732	msi2a	86	52.367	Eptatretus_burgeri
ENSLBEG00000026223	-	100	66.569	ENSEASG00005002965	MSI2	97	68.000	Equus_asinus_asinus
ENSLBEG00000026223	-	100	65.689	ENSECAG00000011435	MSI2	77	85.514	Equus_caballus
ENSLBEG00000026223	-	77	71.782	ENSEEUG00000007810	MSI2	100	52.215	Erinaceus_europaeus
ENSLBEG00000026223	-	100	78.674	ENSELUG00000001361	msi2b	94	78.674	Esox_lucius
ENSLBEG00000026223	-	100	77.193	ENSELUG00000011747	msi2a	93	87.383	Esox_lucius
ENSLBEG00000026223	-	100	64.516	ENSFCAG00000041686	MSI2	91	85.052	Felis_catus
ENSLBEG00000026223	-	100	68.915	ENSFDAG00000016118	MSI2	100	68.915	Fukomys_damarensis
ENSLBEG00000026223	-	100	72.652	ENSFHEG00000000084	msi2a	100	74.033	Fundulus_heteroclitus
ENSLBEG00000026223	-	100	69.795	ENSGALG00000005567	MSI2	94	69.795	Gallus_gallus
ENSLBEG00000026223	-	96	59.940	ENSGAFG00000006974	msi2a	78	86.139	Gambusia_affinis
ENSLBEG00000026223	-	100	73.684	ENSGAGG00000016542	MSI2	94	73.684	Gopherus_agassizii
ENSLBEG00000026223	-	100	68.915	ENSGGOG00000013182	MSI2	93	83.838	Gorilla_gorilla
ENSLBEG00000026223	-	100	86.010	ENSHBUG00000020800	msi2a	93	86.010	Haplochromis_burtoni
ENSLBEG00000026223	-	100	61.290	ENSHGLG00000012444	MSI2	84	61.290	Heterocephalus_glaber_female
ENSLBEG00000026223	-	90	63.492	ENSHGLG00100003744	MSI2	100	63.492	Heterocephalus_glaber_male
ENSLBEG00000026223	-	100	72.376	ENSHCOG00000000266	msi2a	95	73.481	Hippocampus_comes
ENSLBEG00000026223	-	96	67.705	ENSHCOG00000017241	-	91	66.761	Hippocampus_comes
ENSLBEG00000026223	-	100	78.655	ENSIPUG00000003732	msi2b	95	78.655	Ictalurus_punctatus
ENSLBEG00000026223	-	100	80.090	ENSIPUG00000021097	msi2a	93	87.565	Ictalurus_punctatus
ENSLBEG00000026223	-	100	61.877	ENSSTOG00000007884	MSI2	98	61.877	Ictidomys_tridecemlineatus
ENSLBEG00000026223	-	90	58.730	ENSJJAG00000006292	-	100	57.540	Jaculus_jaculus
ENSLBEG00000026223	-	100	77.551	ENSKMAG00000009494	msi2a	97	76.657	Kryptolebias_marmoratus
ENSLBEG00000026223	-	100	79.240	ENSLOCG00000004675	msi2b	95	79.240	Lepisosteus_oculatus
ENSLBEG00000026223	-	100	68.915	ENSMFAG00000003775	MSI2	91	85.052	Macaca_fascicularis
ENSLBEG00000026223	-	100	68.915	ENSMMUG00000002069	MSI2	91	85.052	Macaca_mulatta
ENSLBEG00000026223	-	100	64.516	ENSMNEG00000045275	MSI2	91	85.052	Macaca_nemestrina
ENSLBEG00000026223	-	100	68.915	ENSMLEG00000033888	MSI2	91	85.052	Mandrillus_leucophaeus
ENSLBEG00000026223	-	100	86.528	ENSMAMG00000010503	msi2a	93	86.528	Mastacembelus_armatus
ENSLBEG00000026223	-	100	76.648	ENSMAMG00000002488	-	95	78.022	Mastacembelus_armatus
ENSLBEG00000026223	-	96	86.010	ENSMZEG00005007676	msi2a	89	86.010	Maylandia_zebra
ENSLBEG00000026223	-	100	68.713	ENSMAUG00000003862	Msi2	94	68.713	Mesocricetus_auratus
ENSLBEG00000026223	-	76	65.152	ENSMICG00000032913	-	83	51.613	Microcebus_murinus
ENSLBEG00000026223	-	100	64.516	ENSMICG00000013598	-	91	85.052	Microcebus_murinus
ENSLBEG00000026223	-	100	68.915	ENSMOCG00000005820	Msi2	94	68.915	Microtus_ochrogaster
ENSLBEG00000026223	-	96	64.634	ENSMMOG00000008348	msi2a	83	86.275	Mola_mola
ENSLBEG00000026223	-	90	63.889	ENSMODG00000014790	MSI2	100	63.889	Monodelphis_domestica
ENSLBEG00000026223	-	100	86.528	ENSMALG00000000071	msi2a	93	86.528	Monopterus_albus
ENSLBEG00000026223	-	100	68.915	MGP_CAROLIEiJ_G0016948	Msi2	100	83.529	Mus_caroli
ENSLBEG00000026223	-	100	68.915	ENSMUSG00000069769	Msi2	100	83.529	Mus_musculus
ENSLBEG00000026223	-	100	68.915	MGP_PahariEiJ_G0018079	Msi2	100	83.529	Mus_pahari
ENSLBEG00000026223	-	100	68.915	MGP_SPRETEiJ_G0017795	Msi2	100	83.529	Mus_spretus
ENSLBEG00000026223	-	100	65.982	ENSMPUG00000015377	MSI2	97	65.982	Mustela_putorius_furo
ENSLBEG00000026223	-	100	65.982	ENSMLUG00000007865	MSI2	97	65.982	Myotis_lucifugus
ENSLBEG00000026223	-	100	68.915	ENSNGAG00000017807	Msi2	94	68.915	Nannospalax_galili
ENSLBEG00000026223	-	100	77.843	ENSNBRG00000014596	msi2a	95	77.843	Neolamprologus_brichardi
ENSLBEG00000026223	-	100	68.915	ENSNLEG00000008059	MSI2	95	85.052	Nomascus_leucogenys
ENSLBEG00000026223	-	100	68.915	ENSODEG00000011974	MSI2	94	68.915	Octodon_degus
ENSLBEG00000026223	-	100	63.117	ENSOANG00000005667	MSI2	97	65.633	Ornithorhynchus_anatinus
ENSLBEG00000026223	-	100	65.982	ENSOCUG00000010440	MSI2	97	65.982	Oryctolagus_cuniculus
ENSLBEG00000026223	-	96	86.528	ENSORLG00000009671	msi2a	88	86.528	Oryzias_latipes
ENSLBEG00000026223	-	100	86.528	ENSORLG00020021556	msi2a	93	86.528	Oryzias_latipes_hni
ENSLBEG00000026223	-	96	86.528	ENSORLG00015004592	msi2a	88	86.528	Oryzias_latipes_hsok
ENSLBEG00000026223	-	100	86.528	ENSOMEG00000000146	msi2a	93	86.528	Oryzias_melastigma
ENSLBEG00000026223	-	100	60.704	ENSOGAG00000005621	MSI2	99	60.704	Otolemur_garnettii
ENSLBEG00000026223	-	100	68.915	ENSPPAG00000037697	MSI2	93	83.838	Pan_paniscus
ENSLBEG00000026223	-	100	65.982	ENSPPRG00000001848	MSI2	91	85.052	Panthera_pardus
ENSLBEG00000026223	-	100	68.915	ENSPTIG00000021678	MSI2	83	85.052	Panthera_tigris_altaica
ENSLBEG00000026223	-	57	71.000	ENSPTIG00000021873	-	82	71.000	Panthera_tigris_altaica
ENSLBEG00000026223	-	100	68.915	ENSPTRG00000009437	MSI2	93	83.838	Pan_troglodytes
ENSLBEG00000026223	-	100	64.516	ENSPANG00000022319	MSI2	91	85.052	Papio_anubis
ENSLBEG00000026223	-	96	85.514	ENSPKIG00000007038	-	89	85.492	Paramormyrops_kingsleyae
ENSLBEG00000026223	-	100	73.407	ENSPSIG00000008618	MSI2	95	73.407	Pelodiscus_sinensis
ENSLBEG00000026223	-	100	66.569	ENSPMGG00000005888	msi2a	97	67.449	Periophthalmus_magnuspinnatus
ENSLBEG00000026223	-	100	69.501	ENSPCIG00000006063	MSI2	94	67.622	Phascolarctos_cinereus
ENSLBEG00000026223	-	100	72.928	ENSPREG00000000881	msi2a	95	74.309	Poecilia_reticulata
ENSLBEG00000026223	-	88	60.133	ENSPPYG00000008244	-	100	60.133	Pongo_abelii
ENSLBEG00000026223	-	71	69.118	ENSPCAG00000010552	MSI2	100	43.854	Procavia_capensis
ENSLBEG00000026223	-	69	88.623	ENSPVAG00000017053	MSI2	99	60.411	Pteropus_vampyrus
ENSLBEG00000026223	-	100	86.010	ENSPNYG00000018393	msi2a	93	86.010	Pundamilia_nyererei
ENSLBEG00000026223	-	100	78.426	ENSPNAG00000000844	msi2b	95	78.717	Pygocentrus_nattereri
ENSLBEG00000026223	-	100	79.592	ENSPNAG00000014957	msi2a	95	79.883	Pygocentrus_nattereri
ENSLBEG00000026223	-	100	64.516	ENSRNOG00000025338	Msi2	100	64.516	Rattus_norvegicus
ENSLBEG00000026223	-	100	68.915	ENSSBOG00000026425	MSI2	91	85.052	Saimiri_boliviensis_boliviensis
ENSLBEG00000026223	-	100	69.501	ENSSHAG00000008672	MSI2	100	69.501	Sarcophilus_harrisii
ENSLBEG00000026223	-	96	61.714	ENSSFOG00015012168	msi2b	87	61.714	Scleropages_formosus
ENSLBEG00000026223	-	100	86.010	ENSSFOG00015021687	-	97	86.010	Scleropages_formosus
ENSLBEG00000026223	-	100	86.528	ENSSMAG00000018484	msi2a	93	86.528	Scophthalmus_maximus
ENSLBEG00000026223	-	81	83.962	ENSSDUG00000021968	-	86	88.119	Seriola_dumerili
ENSLBEG00000026223	-	100	86.528	ENSSDUG00000014507	msi2a	93	86.528	Seriola_dumerili
ENSLBEG00000026223	-	96	86.528	ENSSLDG00000017172	msi2a	88	86.528	Seriola_lalandi_dorsalis
ENSLBEG00000026223	-	96	86.528	ENSSPAG00000017793	msi2a	89	86.528	Stegastes_partitus
ENSLBEG00000026223	-	100	68.915	ENSSSCG00000038505	MSI2	89	86.010	Sus_scrofa
ENSLBEG00000026223	-	90	63.889	ENSTGUG00000008452	MSI2	100	63.889	Taeniopygia_guttata
ENSLBEG00000026223	-	96	70.977	ENSTRUG00000021248	msi2a	90	72.126	Takifugu_rubripes
ENSLBEG00000026223	-	56	72.917	ENSTBEG00000001241	MSI2	59	72.917	Tupaia_belangeri
ENSLBEG00000026223	-	75	88.158	ENSTTRG00000002189	MSI2	91	88.158	Tursiops_truncatus
ENSLBEG00000026223	-	100	65.982	ENSUAMG00000000700	MSI2	96	86.010	Ursus_americanus
ENSLBEG00000026223	-	85	74.180	ENSUMAG00000000505	MSI2	95	86.010	Ursus_maritimus
ENSLBEG00000026223	-	100	68.915	ENSVVUG00000011783	MSI2	94	68.915	Vulpes_vulpes
ENSLBEG00000026223	-	100	76.676	ENSXCOG00000006113	msi2a	96	76.316	Xiphophorus_couchianus
ENSLBEG00000026223	-	100	86.528	ENSXMAG00000000608	msi2a	93	86.528	Xiphophorus_maculatus