EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000026238 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 5970 bases
Position: chrFKLU01000098.1:327109-333078
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000034935	HGTP_anticodon	PF03129.20	6.2e-19	1	1
ENSLBEP00000034935	tRNA-synt_2b	PF00587.25	4.1e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000036425	-	1215	-	ENSLBEP00000034935	404 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000026238's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000026238's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000026238	-	99	60.000	ENSLBEG00000018541	tarsl2	63	57.412
ENSLBEG00000026238	-	99	57.176	ENSLBEG00000018238	-	64	57.176
ENSLBEG00000026238	-	99	62.824	ENSLBEG00000014334	tars	59	62.824

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000026238	-	99	60.798	ENSG00000185418	TARSL2	53	60.798	Homo_sapiens
ENSLBEG00000026238	-	100	76.000	ENSAPOG00000015706	-	100	76.000	Acanthochromis_polyacanthus
ENSLBEG00000026238	-	98	60.859	ENSAMEG00000003074	TARSL2	54	60.859	Ailuropoda_melanoleuca
ENSLBEG00000026238	-	99	87.028	ENSACIG00000007759	-	92	87.028	Amphilophus_citrinellus
ENSLBEG00000026238	-	99	81.991	ENSAOCG00000012359	-	98	81.991	Amphiprion_ocellaris
ENSLBEG00000026238	-	100	77.176	ENSAPEG00000007512	-	100	77.176	Amphiprion_percula
ENSLBEG00000026238	-	100	88.000	ENSATEG00000023568	-	61	88.000	Anabas_testudineus
ENSLBEG00000026238	-	98	62.291	ENSAPLG00000008485	TARSL2	58	62.291	Anas_platyrhynchos
ENSLBEG00000026238	-	98	43.990	ENSACAG00000000199	TARSL2	52	43.990	Anolis_carolinensis
ENSLBEG00000026238	-	99	58.118	ENSACAG00000003076	-	62	58.118	Anolis_carolinensis
ENSLBEG00000026238	-	99	56.235	ENSANAG00000020687	TARSL2	50	59.103	Aotus_nancymaae
ENSLBEG00000026238	-	100	86.824	ENSACLG00000020262	-	61	86.824	Astatotilapia_calliptera
ENSLBEG00000026238	-	100	78.118	ENSAMXG00000012533	-	61	78.118	Astyanax_mexicanus
ENSLBEG00000026238	-	99	58.451	ENSBTAG00000007651	TARSL2	53	58.451	Bos_taurus
ENSLBEG00000026238	-	99	62.069	ENSCJAG00000017350	TARSL2	50	63.325	Callithrix_jacchus
ENSLBEG00000026238	-	99	60.714	ENSCAFG00000010453	TARSL2	52	60.714	Canis_familiaris
ENSLBEG00000026238	-	99	60.476	ENSCAFG00020020868	TARSL2	68	60.476	Canis_lupus_dingo
ENSLBEG00000026238	-	99	58.920	ENSTSYG00000004538	TARSL2	60	58.920	Carlito_syrichta
ENSLBEG00000026238	-	99	52.817	ENSCAPG00000004815	TARSL2	63	52.817	Cavia_aperea
ENSLBEG00000026238	-	99	60.329	ENSCPOG00000008850	TARSL2	61	60.329	Cavia_porcellus
ENSLBEG00000026238	-	99	60.471	ENSCCAG00000030068	TARSL2	52	60.471	Cebus_capucinus
ENSLBEG00000026238	-	99	60.808	ENSCATG00000037383	TARSL2	54	60.808	Cercocebus_atys
ENSLBEG00000026238	-	99	60.329	ENSCLAG00000016873	TARSL2	55	60.329	Chinchilla_lanigera
ENSLBEG00000026238	-	99	60.808	ENSCSAG00000016828	TARSL2	52	60.808	Chlorocebus_sabaeus
ENSLBEG00000026238	-	88	63.061	ENSCHOG00000001319	TARSL2	58	63.061	Choloepus_hoffmanni
ENSLBEG00000026238	-	99	61.758	ENSCPBG00000010792	TARSL2	53	61.758	Chrysemys_picta_bellii
ENSLBEG00000026238	-	99	61.045	ENSCANG00000035438	TARSL2	59	61.045	Colobus_angolensis_palliatus
ENSLBEG00000026238	-	99	60.329	ENSCGRG00001020827	Tarsl2	54	60.329	Cricetulus_griseus_chok1gshd
ENSLBEG00000026238	-	99	60.329	ENSCGRG00000011398	Tarsl2	59	60.329	Cricetulus_griseus_crigri
ENSLBEG00000026238	-	100	84.471	ENSCSEG00000002562	-	99	82.588	Cynoglossus_semilaevis
ENSLBEG00000026238	-	100	85.882	ENSCVAG00000009253	-	99	85.882	Cyprinodon_variegatus
ENSLBEG00000026238	-	99	75.414	ENSDARG00000075385	LO017852.1	99	75.414	Danio_rerio
ENSLBEG00000026238	-	99	57.277	ENSDNOG00000046161	TARSL2	61	57.277	Dasypus_novemcinctus
ENSLBEG00000026238	-	99	60.476	ENSDORG00000009653	Tarsl2	60	60.476	Dipodomys_ordii
ENSLBEG00000026238	-	99	60.094	ENSEASG00005017718	TARSL2	53	60.094	Equus_asinus_asinus
ENSLBEG00000026238	-	99	60.094	ENSECAG00000024315	TARSL2	53	60.094	Equus_caballus
ENSLBEG00000026238	-	99	59.624	ENSEEUG00000014117	TARSL2	69	59.624	Erinaceus_europaeus
ENSLBEG00000026238	-	100	79.765	ENSELUG00000013552	-	61	79.765	Esox_lucius
ENSLBEG00000026238	-	99	60.329	ENSFCAG00000008836	TARSL2	53	60.329	Felis_catus
ENSLBEG00000026238	-	99	62.857	ENSFALG00000012444	TARSL2	57	62.441	Ficedula_albicollis
ENSLBEG00000026238	-	99	59.390	ENSFDAG00000002767	TARSL2	64	59.390	Fukomys_damarensis
ENSLBEG00000026238	-	100	85.412	ENSFHEG00000021877	-	78	85.412	Fundulus_heteroclitus
ENSLBEG00000026238	-	100	82.353	ENSGMOG00000006184	-	62	82.353	Gadus_morhua
ENSLBEG00000026238	-	100	58.451	ENSGALG00000043416	-	96	58.513	Gallus_gallus
ENSLBEG00000026238	-	99	61.502	ENSGALG00000003985	TARSL2	54	61.502	Gallus_gallus
ENSLBEG00000026238	-	100	85.647	ENSGAFG00000012691	-	62	85.647	Gambusia_affinis
ENSLBEG00000026238	-	100	86.588	ENSGACG00000011734	-	62	86.588	Gasterosteus_aculeatus
ENSLBEG00000026238	-	99	62.233	ENSGAGG00000010775	TARSL2	53	62.233	Gopherus_agassizii
ENSLBEG00000026238	-	99	60.563	ENSGGOG00000007839	TARSL2	55	60.563	Gorilla_gorilla
ENSLBEG00000026238	-	100	87.294	ENSHBUG00000003411	-	62	87.294	Haplochromis_burtoni
ENSLBEG00000026238	-	99	60.094	ENSHGLG00000011618	TARSL2	54	60.094	Heterocephalus_glaber_female
ENSLBEG00000026238	-	99	60.094	ENSHGLG00100016769	TARSL2	61	60.094	Heterocephalus_glaber_male
ENSLBEG00000026238	-	100	80.941	ENSHCOG00000014119	-	61	80.941	Hippocampus_comes
ENSLBEG00000026238	-	100	70.588	ENSIPUG00000000099	-	100	70.588	Ictalurus_punctatus
ENSLBEG00000026238	-	99	60.563	ENSSTOG00000032725	TARSL2	54	60.563	Ictidomys_tridecemlineatus
ENSLBEG00000026238	-	100	85.412	ENSKMAG00000001354	-	61	85.412	Kryptolebias_marmoratus
ENSLBEG00000026238	-	99	60.563	ENSLAFG00000011941	TARSL2	63	60.563	Loxodonta_africana
ENSLBEG00000026238	-	99	60.570	ENSMFAG00000001902	TARSL2	52	60.570	Macaca_fascicularis
ENSLBEG00000026238	-	99	60.808	ENSMMUG00000000278	TARSL2	52	60.808	Macaca_mulatta
ENSLBEG00000026238	-	99	60.570	ENSMNEG00000034952	TARSL2	52	60.570	Macaca_nemestrina
ENSLBEG00000026238	-	99	61.045	ENSMLEG00000035535	TARSL2	60	61.045	Mandrillus_leucophaeus
ENSLBEG00000026238	-	100	86.824	ENSMAMG00000015032	-	61	86.824	Mastacembelus_armatus
ENSLBEG00000026238	-	100	86.824	ENSMZEG00005015989	-	61	86.824	Maylandia_zebra
ENSLBEG00000026238	-	84	62.011	ENSMGAG00000004951	TARSL2	57	62.011	Meleagris_gallopavo
ENSLBEG00000026238	-	89	56.477	ENSMAUG00000015756	Tarsl2	54	56.477	Mesocricetus_auratus
ENSLBEG00000026238	-	99	60.329	ENSMICG00000013039	TARSL2	62	60.329	Microcebus_murinus
ENSLBEG00000026238	-	99	61.033	ENSMOCG00000014909	Tarsl2	54	61.033	Microtus_ochrogaster
ENSLBEG00000026238	-	94	87.531	ENSMMOG00000016135	-	92	87.500	Mola_mola
ENSLBEG00000026238	-	99	60.563	ENSMODG00000011941	TARSL2	53	60.563	Monodelphis_domestica
ENSLBEG00000026238	-	100	85.647	ENSMALG00000007340	-	60	85.647	Monopterus_albus
ENSLBEG00000026238	-	99	60.329	MGP_CAROLIEiJ_G0029834	Tarsl2	54	60.329	Mus_caroli
ENSLBEG00000026238	-	99	60.094	ENSMUSG00000030515	Tarsl2	54	60.094	Mus_musculus
ENSLBEG00000026238	-	99	60.329	MGP_PahariEiJ_G0013059	Tarsl2	54	60.329	Mus_pahari
ENSLBEG00000026238	-	99	61.268	ENSMPUG00000011032	TARSL2	55	61.268	Mustela_putorius_furo
ENSLBEG00000026238	-	99	58.451	ENSMLUG00000012870	-	53	58.451	Myotis_lucifugus
ENSLBEG00000026238	-	73	63.091	ENSMLUG00000024482	-	53	63.091	Myotis_lucifugus
ENSLBEG00000026238	-	99	60.563	ENSNGAG00000020451	Tarsl2	54	60.563	Nannospalax_galili
ENSLBEG00000026238	-	100	87.059	ENSNBRG00000003429	-	62	87.059	Neolamprologus_brichardi
ENSLBEG00000026238	-	100	60.187	ENSNLEG00000000541	TARSL2	54	60.187	Nomascus_leucogenys
ENSLBEG00000026238	-	99	54.157	ENSMEUG00000002935	TARSL2	53	54.157	Notamacropus_eugenii
ENSLBEG00000026238	-	99	60.329	ENSODEG00000014454	TARSL2	54	60.329	Octodon_degus
ENSLBEG00000026238	-	100	87.089	ENSONIG00000006402	-	64	87.089	Oreochromis_niloticus
ENSLBEG00000026238	-	99	60.859	ENSOANG00000013263	TARSL2	62	60.859	Ornithorhynchus_anatinus
ENSLBEG00000026238	-	99	59.390	ENSOCUG00000010740	TARSL2	60	59.390	Oryctolagus_cuniculus
ENSLBEG00000026238	-	100	84.235	ENSORLG00000010391	-	61	84.235	Oryzias_latipes
ENSLBEG00000026238	-	100	84.471	ENSORLG00020008928	-	62	84.471	Oryzias_latipes_hni
ENSLBEG00000026238	-	100	84.471	ENSORLG00015014897	-	62	84.471	Oryzias_latipes_hsok
ENSLBEG00000026238	-	100	85.412	ENSOMEG00000009022	-	62	85.412	Oryzias_melastigma
ENSLBEG00000026238	-	99	59.155	ENSOGAG00000014311	TARSL2	53	59.155	Otolemur_garnettii
ENSLBEG00000026238	-	99	58.451	ENSOARG00000016573	TARSL2	60	58.451	Ovis_aries
ENSLBEG00000026238	-	99	60.329	ENSPPAG00000040066	TARSL2	61	60.329	Pan_paniscus
ENSLBEG00000026238	-	99	60.094	ENSPPRG00000017275	TARSL2	53	60.094	Panthera_pardus
ENSLBEG00000026238	-	99	60.094	ENSPTIG00000015184	TARSL2	53	60.094	Panthera_tigris_altaica
ENSLBEG00000026238	-	99	60.563	ENSPTRG00000007516	TARSL2	53	60.563	Pan_troglodytes
ENSLBEG00000026238	-	99	57.639	ENSPANG00000022401	TARSL2	53	57.639	Papio_anubis
ENSLBEG00000026238	-	100	73.882	ENSPKIG00000010658	-	98	73.095	Paramormyrops_kingsleyae
ENSLBEG00000026238	-	99	60.808	ENSPSIG00000008419	TARSL2	72	60.808	Pelodiscus_sinensis
ENSLBEG00000026238	-	100	82.353	ENSPMGG00000007785	-	98	82.353	Periophthalmus_magnuspinnatus
ENSLBEG00000026238	-	99	60.563	ENSPEMG00000019852	Tarsl2	58	60.563	Peromyscus_maniculatus_bairdii
ENSLBEG00000026238	-	99	61.033	ENSPCIG00000022481	TARSL2	53	61.033	Phascolarctos_cinereus
ENSLBEG00000026238	-	100	85.681	ENSPFOG00000013444	-	64	85.681	Poecilia_formosa
ENSLBEG00000026238	-	100	85.647	ENSPLAG00000018145	-	62	85.647	Poecilia_latipinna
ENSLBEG00000026238	-	100	85.882	ENSPMEG00000023625	-	62	85.882	Poecilia_mexicana
ENSLBEG00000026238	-	100	84.000	ENSPREG00000017312	-	100	84.000	Poecilia_reticulata
ENSLBEG00000026238	-	99	60.563	ENSPPYG00000006830	TARSL2	60	60.563	Pongo_abelii
ENSLBEG00000026238	-	99	54.394	ENSPCAG00000011132	TARSL2	52	54.394	Procavia_capensis
ENSLBEG00000026238	-	99	55.062	ENSPCOG00000026095	TARSL2	51	55.062	Propithecus_coquereli
ENSLBEG00000026238	-	100	87.059	ENSPNYG00000004232	-	61	87.059	Pundamilia_nyererei
ENSLBEG00000026238	-	100	78.118	ENSPNAG00000002308	-	62	78.118	Pygocentrus_nattereri
ENSLBEG00000026238	-	99	60.808	ENSRBIG00000035707	TARSL2	54	60.808	Rhinopithecus_bieti
ENSLBEG00000026238	-	99	60.808	ENSRROG00000029492	TARSL2	59	60.808	Rhinopithecus_roxellana
ENSLBEG00000026238	-	99	59.765	ENSSBOG00000029807	TARSL2	61	59.765	Saimiri_boliviensis_boliviensis
ENSLBEG00000026238	-	99	61.268	ENSSHAG00000010266	TARSL2	56	61.268	Sarcophilus_harrisii
ENSLBEG00000026238	-	100	74.118	ENSSFOG00015022086	tars2	88	71.074	Scleropages_formosus
ENSLBEG00000026238	-	100	87.059	ENSSMAG00000015682	-	62	87.059	Scophthalmus_maximus
ENSLBEG00000026238	-	100	88.000	ENSSDUG00000007180	-	98	88.000	Seriola_dumerili
ENSLBEG00000026238	-	100	88.235	ENSSLDG00000015367	-	99	88.235	Seriola_lalandi_dorsalis
ENSLBEG00000026238	-	94	63.433	ENSSPUG00000001523	TARSL2	98	61.033	Sphenodon_punctatus
ENSLBEG00000026238	-	100	84.471	ENSSPAG00000018887	-	62	84.471	Stegastes_partitus
ENSLBEG00000026238	-	94	59.453	ENSSSCG00000005781	TARSL2	63	57.482	Sus_scrofa
ENSLBEG00000026238	-	98	56.699	ENSTGUG00000004602	-	97	56.699	Taeniopygia_guttata
ENSLBEG00000026238	-	99	61.737	ENSTGUG00000005726	TARSL2	63	61.737	Taeniopygia_guttata
ENSLBEG00000026238	-	100	85.412	ENSTRUG00000015004	-	99	85.412	Takifugu_rubripes
ENSLBEG00000026238	-	99	81.628	ENSTNIG00000008060	-	58	84.521	Tetraodon_nigroviridis
ENSLBEG00000026238	-	83	55.153	ENSTBEG00000001134	-	53	55.153	Tupaia_belangeri
ENSLBEG00000026238	-	99	57.746	ENSTTRG00000016207	TARSL2	61	57.746	Tursiops_truncatus
ENSLBEG00000026238	-	99	60.563	ENSUMAG00000024371	TARSL2	75	60.563	Ursus_maritimus
ENSLBEG00000026238	-	99	60.714	ENSVVUG00000014742	TARSL2	61	60.714	Vulpes_vulpes
ENSLBEG00000026238	-	100	85.647	ENSXCOG00000019508	-	97	85.337	Xiphophorus_couchianus
ENSLBEG00000026238	-	100	86.118	ENSXMAG00000016382	-	62	86.118	Xiphophorus_maculatus