EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000026249 (Gene tree)
Gene ID: 110000877
Gene Symbol: snrnp48
Alias: fd10a06|wu:fd10a06
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 9608 bases
Position: chrFKLU01000730.1:109078-118685
Accession: 110000877
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000034932	zf-U11-48K	PF05253.12	1.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000036422	-	4136	XM_020656247	ENSLBEP00000034932	337 (aa)	XP_020511903	UPI0009B39C9E

Gene Model

Click here to download ENSLBEG00000026249's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000026249's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000026249	snrnp48	95	43.023	ENSG00000168566	SNRNP48	76	49.035	Homo_sapiens
ENSLBEG00000026249	snrnp48	95	77.778	ENSAPOG00000021430	snrnp48	82	78.339	Acanthochromis_polyacanthus
ENSLBEG00000026249	snrnp48	95	44.058	ENSAMEG00000017349	SNRNP48	74	49.225	Ailuropoda_melanoleuca
ENSLBEG00000026249	snrnp48	93	72.240	ENSACIG00000002032	snrnp48	95	72.360	Amphilophus_citrinellus
ENSLBEG00000026249	snrnp48	95	77.640	ENSAOCG00000010562	snrnp48	82	77.617	Amphiprion_ocellaris
ENSLBEG00000026249	snrnp48	95	77.329	ENSAPEG00000003231	snrnp48	82	77.256	Amphiprion_percula
ENSLBEG00000026249	snrnp48	93	79.365	ENSATEG00000020210	snrnp48	82	78.909	Anabas_testudineus
ENSLBEG00000026249	snrnp48	81	49.141	ENSACAG00000002811	SNRNP48	67	52.074	Anolis_carolinensis
ENSLBEG00000026249	snrnp48	95	42.442	ENSANAG00000033538	SNRNP48	76	49.421	Aotus_nancymaae
ENSLBEG00000026249	snrnp48	93	57.053	ENSAMXG00000015309	snrnp48	79	62.835	Astyanax_mexicanus
ENSLBEG00000026249	snrnp48	91	43.491	ENSBTAG00000001123	SNRNP48	81	47.687	Bos_taurus
ENSLBEG00000026249	snrnp48	95	42.899	ENSCJAG00000021330	SNRNP48	76	49.231	Callithrix_jacchus
ENSLBEG00000026249	snrnp48	95	43.917	ENSCAFG00000009574	SNRNP48	64	47.893	Canis_familiaris
ENSLBEG00000026249	snrnp48	95	44.745	ENSCAFG00020013203	SNRNP48	76	47.893	Canis_lupus_dingo
ENSLBEG00000026249	snrnp48	91	45.455	ENSCHIG00000015216	SNRNP48	79	48.897	Capra_hircus
ENSLBEG00000026249	snrnp48	93	43.235	ENSTSYG00000000698	SNRNP48	76	48.837	Carlito_syrichta
ENSLBEG00000026249	snrnp48	87	45.860	ENSCAPG00000006768	SNRNP48	78	50.617	Cavia_aperea
ENSLBEG00000026249	snrnp48	97	45.143	ENSCPOG00000007910	SNRNP48	81	49.104	Cavia_porcellus
ENSLBEG00000026249	snrnp48	95	43.314	ENSCCAG00000035652	SNRNP48	75	49.804	Cebus_capucinus
ENSLBEG00000026249	snrnp48	95	44.118	ENSCATG00000033947	SNRNP48	83	42.857	Cercocebus_atys
ENSLBEG00000026249	snrnp48	97	44.092	ENSCLAG00000003765	SNRNP48	81	49.104	Chinchilla_lanigera
ENSLBEG00000026249	snrnp48	95	43.314	ENSCSAG00000007409	SNRNP48	76	49.421	Chlorocebus_sabaeus
ENSLBEG00000026249	snrnp48	83	45.183	ENSCPBG00000019146	SNRNP48	66	51.659	Chrysemys_picta_bellii
ENSLBEG00000026249	snrnp48	95	43.314	ENSCANG00000030017	SNRNP48	76	49.421	Colobus_angolensis_palliatus
ENSLBEG00000026249	snrnp48	95	42.857	ENSCGRG00001001076	-	77	46.743	Cricetulus_griseus_chok1gshd
ENSLBEG00000026249	snrnp48	85	39.456	ENSCGRG00001008805	-	75	41.975	Cricetulus_griseus_chok1gshd
ENSLBEG00000026249	snrnp48	95	42.857	ENSCGRG00000007781	Snrnp48	77	46.743	Cricetulus_griseus_crigri
ENSLBEG00000026249	snrnp48	96	70.988	ENSCSEG00000000722	snrnp48	78	74.170	Cynoglossus_semilaevis
ENSLBEG00000026249	snrnp48	94	72.727	ENSCVAG00000019829	snrnp48	72	75.540	Cyprinodon_variegatus
ENSLBEG00000026249	snrnp48	93	51.988	ENSDARG00000039989	snrnp48	79	56.250	Danio_rerio
ENSLBEG00000026249	snrnp48	97	41.808	ENSDNOG00000014978	SNRNP48	92	43.411	Dasypus_novemcinctus
ENSLBEG00000026249	snrnp48	97	43.855	ENSDORG00000015140	Snrnp48	78	48.889	Dipodomys_ordii
ENSLBEG00000026249	snrnp48	93	43.544	ENSEASG00005012021	SNRNP48	75	49.609	Equus_asinus_asinus
ENSLBEG00000026249	snrnp48	95	42.899	ENSECAG00000026937	SNRNP48	76	48.276	Equus_caballus
ENSLBEG00000026249	snrnp48	95	30.882	ENSEEUG00000015437	SNRNP48	75	32.422	Erinaceus_europaeus
ENSLBEG00000026249	snrnp48	93	57.988	ENSELUG00000009766	snrnp48	72	65.504	Esox_lucius
ENSLBEG00000026249	snrnp48	95	42.442	ENSFCAG00000018853	SNRNP48	76	48.485	Felis_catus
ENSLBEG00000026249	snrnp48	69	54.583	ENSFALG00000007797	SNRNP48	71	55.556	Ficedula_albicollis
ENSLBEG00000026249	snrnp48	97	45.115	ENSFDAG00000009231	SNRNP48	81	48.746	Fukomys_damarensis
ENSLBEG00000026249	snrnp48	60	81.773	ENSFHEG00000014647	snrnp48	79	77.293	Fundulus_heteroclitus
ENSLBEG00000026249	snrnp48	90	61.250	ENSGMOG00000018599	-	82	68.462	Gadus_morhua
ENSLBEG00000026249	snrnp48	76	51.321	ENSGALG00000013005	SNRNP48	68	58.049	Gallus_gallus
ENSLBEG00000026249	snrnp48	95	71.865	ENSGAFG00000021639	snrnp48	81	72.662	Gambusia_affinis
ENSLBEG00000026249	snrnp48	73	80.321	ENSGACG00000017756	-	77	79.767	Gasterosteus_aculeatus
ENSLBEG00000026249	snrnp48	83	44.000	ENSGAGG00000000865	SNRNP48	68	50.952	Gopherus_agassizii
ENSLBEG00000026249	snrnp48	95	43.314	ENSGGOG00000013220	SNRNP48	76	49.421	Gorilla_gorilla
ENSLBEG00000026249	snrnp48	93	77.603	ENSHBUG00000017066	snrnp48	94	77.640	Haplochromis_burtoni
ENSLBEG00000026249	snrnp48	97	42.493	ENSHGLG00000015241	SNRNP48	81	48.387	Heterocephalus_glaber_female
ENSLBEG00000026249	snrnp48	97	42.493	ENSHGLG00100010027	SNRNP48	81	48.387	Heterocephalus_glaber_male
ENSLBEG00000026249	snrnp48	81	69.286	ENSHCOG00000014066	snrnp48	82	70.318	Hippocampus_comes
ENSLBEG00000026249	snrnp48	97	42.776	ENSSTOG00000014635	SNRNP48	78	47.761	Ictidomys_tridecemlineatus
ENSLBEG00000026249	snrnp48	82	46.341	ENSJJAG00000011495	Snrnp48	78	47.368	Jaculus_jaculus
ENSLBEG00000026249	snrnp48	95	74.303	ENSKMAG00000016514	snrnp48	82	76.259	Kryptolebias_marmoratus
ENSLBEG00000026249	snrnp48	91	48.955	ENSLACG00000003958	SNRNP48	78	51.698	Latimeria_chalumnae
ENSLBEG00000026249	snrnp48	83	60.777	ENSLOCG00000004187	snrnp48	79	60.517	Lepisosteus_oculatus
ENSLBEG00000026249	snrnp48	77	46.125	ENSLAFG00000011152	SNRNP48	76	46.565	Loxodonta_africana
ENSLBEG00000026249	snrnp48	95	43.314	ENSMFAG00000045216	SNRNP48	83	42.857	Macaca_fascicularis
ENSLBEG00000026249	snrnp48	95	43.314	ENSMMUG00000014785	SNRNP48	76	49.421	Macaca_mulatta
ENSLBEG00000026249	snrnp48	95	43.314	ENSMNEG00000042269	SNRNP48	76	49.421	Macaca_nemestrina
ENSLBEG00000026249	snrnp48	95	43.314	ENSMLEG00000034004	SNRNP48	83	42.857	Mandrillus_leucophaeus
ENSLBEG00000026249	snrnp48	95	76.012	ENSMAMG00000018673	snrnp48	71	76.449	Mastacembelus_armatus
ENSLBEG00000026249	snrnp48	82	49.007	ENSMGAG00000006037	SNRNP48	68	58.537	Meleagris_gallopavo
ENSLBEG00000026249	snrnp48	95	42.985	ENSMAUG00000011944	Snrnp48	77	47.126	Mesocricetus_auratus
ENSLBEG00000026249	snrnp48	95	42.029	ENSMICG00000012497	SNRNP48	76	48.092	Microcebus_murinus
ENSLBEG00000026249	snrnp48	95	43.750	ENSMOCG00000015555	Snrnp48	77	48.092	Microtus_ochrogaster
ENSLBEG00000026249	snrnp48	56	84.211	ENSMMOG00000003072	-	60	84.211	Mola_mola
ENSLBEG00000026249	snrnp48	82	48.097	ENSMODG00000009996	SNRNP48	72	48.699	Monodelphis_domestica
ENSLBEG00000026249	snrnp48	95	79.439	ENSMALG00000005725	snrnp48	95	79.439	Monopterus_albus
ENSLBEG00000026249	snrnp48	95	42.857	MGP_CAROLIEiJ_G0018441	Snrnp48	75	48.235	Mus_caroli
ENSLBEG00000026249	snrnp48	95	42.857	ENSMUSG00000021431	Snrnp48	75	48.235	Mus_musculus
ENSLBEG00000026249	snrnp48	95	43.732	MGP_PahariEiJ_G0019509	Snrnp48	77	47.893	Mus_pahari
ENSLBEG00000026249	snrnp48	95	44.214	MGP_SPRETEiJ_G0019321	Snrnp48	75	48.235	Mus_spretus
ENSLBEG00000026249	snrnp48	95	43.491	ENSNGAG00000004849	Snrnp48	76	47.126	Nannospalax_galili
ENSLBEG00000026249	snrnp48	93	77.918	ENSNBRG00000012127	snrnp48	94	77.950	Neolamprologus_brichardi
ENSLBEG00000026249	snrnp48	95	43.314	ENSNLEG00000011667	SNRNP48	76	49.421	Nomascus_leucogenys
ENSLBEG00000026249	snrnp48	82	46.479	ENSOPRG00000015471	SNRNP48	81	46.923	Ochotona_princeps
ENSLBEG00000026249	snrnp48	93	76.972	ENSONIG00000001520	snrnp48	94	77.019	Oreochromis_niloticus
ENSLBEG00000026249	snrnp48	54	37.198	ENSOANG00000019888	-	99	38.164	Ornithorhynchus_anatinus
ENSLBEG00000026249	snrnp48	79	47.080	ENSOCUG00000005168	SNRNP48	85	48.659	Oryctolagus_cuniculus
ENSLBEG00000026249	snrnp48	88	76.510	ENSORLG00000015654	snrnp48	80	75.812	Oryzias_latipes
ENSLBEG00000026249	snrnp48	88	75.168	ENSORLG00020015976	snrnp48	68	75.451	Oryzias_latipes_hni
ENSLBEG00000026249	snrnp48	88	75.503	ENSORLG00015022379	snrnp48	69	75.812	Oryzias_latipes_hsok
ENSLBEG00000026249	snrnp48	93	75.786	ENSOMEG00000022007	snrnp48	80	76.364	Oryzias_melastigma
ENSLBEG00000026249	snrnp48	83	48.443	ENSOGAG00000005275	SNRNP48	79	49.430	Otolemur_garnettii
ENSLBEG00000026249	snrnp48	83	45.424	ENSOARG00000017319	SNRNP48	77	51.327	Ovis_aries
ENSLBEG00000026249	snrnp48	95	43.314	ENSPPAG00000032873	SNRNP48	76	49.421	Pan_paniscus
ENSLBEG00000026249	snrnp48	93	43.068	ENSPPRG00000004283	SNRNP48	74	49.421	Panthera_pardus
ENSLBEG00000026249	snrnp48	69	50.638	ENSPTIG00000013502	SNRNP48	72	52.336	Panthera_tigris_altaica
ENSLBEG00000026249	snrnp48	95	43.314	ENSPTRG00000017703	SNRNP48	76	49.421	Pan_troglodytes
ENSLBEG00000026249	snrnp48	95	43.314	ENSPANG00000000771	SNRNP48	83	42.857	Papio_anubis
ENSLBEG00000026249	snrnp48	89	57.055	ENSPKIG00000013703	snrnp48	56	63.740	Paramormyrops_kingsleyae
ENSLBEG00000026249	snrnp48	79	45.583	ENSPSIG00000002213	SNRNP48	66	52.133	Pelodiscus_sinensis
ENSLBEG00000026249	snrnp48	76	65.267	ENSPMGG00000008120	snrnp48	93	65.267	Periophthalmus_magnuspinnatus
ENSLBEG00000026249	snrnp48	95	43.149	ENSPEMG00000008872	Snrnp48	77	47.510	Peromyscus_maniculatus_bairdii
ENSLBEG00000026249	snrnp48	95	73.394	ENSPFOG00000003578	snrnp48	81	74.820	Poecilia_formosa
ENSLBEG00000026249	snrnp48	69	78.059	ENSPLAG00000002290	snrnp48	82	78.059	Poecilia_latipinna
ENSLBEG00000026249	snrnp48	95	72.783	ENSPMEG00000018033	snrnp48	81	74.101	Poecilia_mexicana
ENSLBEG00000026249	snrnp48	95	73.089	ENSPREG00000018541	snrnp48	81	74.101	Poecilia_reticulata
ENSLBEG00000026249	snrnp48	95	43.605	ENSPPYG00000016209	SNRNP48	76	49.807	Pongo_abelii
ENSLBEG00000026249	snrnp48	72	35.827	ENSPCAG00000011991	SNRNP48	97	36.782	Procavia_capensis
ENSLBEG00000026249	snrnp48	97	42.898	ENSPVAG00000002854	SNRNP48	78	48.689	Pteropus_vampyrus
ENSLBEG00000026249	snrnp48	92	78.205	ENSPNYG00000015399	snrnp48	89	78.700	Pundamilia_nyererei
ENSLBEG00000026249	snrnp48	95	43.516	ENSRNOG00000013756	Snrnp48	77	48.659	Rattus_norvegicus
ENSLBEG00000026249	snrnp48	82	48.421	ENSRBIG00000043856	SNRNP48	82	49.421	Rhinopithecus_bieti
ENSLBEG00000026249	snrnp48	95	43.314	ENSRROG00000043229	SNRNP48	76	49.421	Rhinopithecus_roxellana
ENSLBEG00000026249	snrnp48	95	42.733	ENSSBOG00000019486	SNRNP48	76	49.807	Saimiri_boliviensis_boliviensis
ENSLBEG00000026249	snrnp48	82	47.603	ENSSHAG00000014483	SNRNP48	73	49.416	Sarcophilus_harrisii
ENSLBEG00000026249	snrnp48	73	60.392	ENSSFOG00015006610	snrnp48	62	60.305	Scleropages_formosus
ENSLBEG00000026249	snrnp48	95	82.188	ENSSDUG00000014953	snrnp48	95	81.931	Seriola_dumerili
ENSLBEG00000026249	snrnp48	95	81.620	ENSSLDG00000005989	snrnp48	95	81.366	Seriola_lalandi_dorsalis
ENSLBEG00000026249	snrnp48	90	46.965	ENSSPUG00000006257	SNRNP48	63	53.363	Sphenodon_punctatus
ENSLBEG00000026249	snrnp48	96	78.462	ENSSPAG00000006454	snrnp48	96	78.462	Stegastes_partitus
ENSLBEG00000026249	snrnp48	76	49.819	ENSTGUG00000007575	SNRNP48	65	57.353	Taeniopygia_guttata
ENSLBEG00000026249	snrnp48	95	69.040	ENSTRUG00000007031	snrnp48	82	72.101	Takifugu_rubripes
ENSLBEG00000026249	snrnp48	99	67.456	ENSTNIG00000012977	-	84	70.609	Tetraodon_nigroviridis
ENSLBEG00000026249	snrnp48	77	46.296	ENSTBEG00000015620	SNRNP48	79	46.296	Tupaia_belangeri
ENSLBEG00000026249	snrnp48	91	43.620	ENSTTRG00000016715	SNRNP48	76	48.649	Tursiops_truncatus
ENSLBEG00000026249	snrnp48	95	44.838	ENSUAMG00000003690	SNRNP48	76	49.225	Ursus_americanus
ENSLBEG00000026249	snrnp48	71	50.000	ENSVPAG00000003557	SNRNP48	77	51.111	Vicugna_pacos
ENSLBEG00000026249	snrnp48	94	45.075	ENSVVUG00000004996	SNRNP48	75	48.450	Vulpes_vulpes
ENSLBEG00000026249	snrnp48	83	48.780	ENSXETG00000020447	snrnp48	76	49.416	Xenopus_tropicalis
ENSLBEG00000026249	snrnp48	70	77.311	ENSXCOG00000004478	snrnp48	73	76.891	Xiphophorus_couchianus
ENSLBEG00000026249	snrnp48	95	73.089	ENSXMAG00000013595	snrnp48	81	74.101	Xiphophorus_maculatus