EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000026281 (Gene tree)
Gene ID: 110001987
Gene Symbol: ddx56
Alias: noh61|zgc:110078
Full Name: DEAD-box helicase 56
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 15819 bases
Position: chrFKLU01000885.1:66426-82244
Accession: 110001987
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000034986	ResIII	PF04851.15	3e-07	1	1
ENSLBEP00000035002	ResIII	PF04851.15	3.1e-07	1	1
ENSLBEP00000035002	DEAD	PF00270.29	2.6e-39	1	1
ENSLBEP00000034986	DEAD	PF00270.29	3e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000036480	-	3212	XM_020657584	ENSLBEP00000034986	559 (aa)	XP_020513240	UPI0009B3F63D
ENSLBET00000036496	-	1584	-	ENSLBEP00000035002	527 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000026281's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000026281's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000026281	ddx56	75	30.227	ENSLBEG00000022905	ddx5	62	30.446
ENSLBEG00000026281	ddx56	73	30.691	ENSLBEG00000015403	ddx52	53	30.273
ENSLBEG00000026281	ddx56	69	30.366	ENSLBEG00000016034	-	57	30.270
ENSLBEG00000026281	ddx56	76	32.426	ENSLBEG00000022589	ddx27	52	32.108
ENSLBEG00000026281	ddx56	71	31.135	ENSLBEG00000027804	ddx49	79	30.521
ENSLBEG00000026281	ddx56	73	32.642	ENSLBEG00000028348	ddx47	73	31.407

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000026281	ddx56	98	63.738	ENSG00000136271	DDX56	96	68.927	Homo_sapiens
ENSLBEG00000026281	ddx56	100	89.088	ENSAPOG00000017113	ddx56	99	89.088	Acanthochromis_polyacanthus
ENSLBEG00000026281	ddx56	98	62.852	ENSAMEG00000017711	DDX56	98	63.109	Ailuropoda_melanoleuca
ENSLBEG00000026281	ddx56	96	74.164	ENSACIG00000013747	ddx56	99	85.246	Amphilophus_citrinellus
ENSLBEG00000026281	ddx56	90	89.167	ENSAOCG00000015447	-	87	90.144	Amphiprion_ocellaris
ENSLBEG00000026281	ddx56	94	88.224	ENSAOCG00000018059	ddx56	94	90.000	Amphiprion_ocellaris
ENSLBEG00000026281	ddx56	100	87.299	ENSAPEG00000007267	ddx56	99	86.762	Amphiprion_percula
ENSLBEG00000026281	ddx56	99	87.074	ENSATEG00000005279	ddx56	99	87.792	Anabas_testudineus
ENSLBEG00000026281	ddx56	100	83.900	ENSACLG00000020113	ddx56	99	83.721	Astatotilapia_calliptera
ENSLBEG00000026281	ddx56	99	75.134	ENSAMXG00000019357	ddx56	99	75.313	Astyanax_mexicanus
ENSLBEG00000026281	ddx56	98	64.728	ENSBTAG00000010602	DDX56	98	64.673	Bos_taurus
ENSLBEG00000026281	ddx56	97	39.606	WBGene00016073	C24H12.4	86	39.107	Caenorhabditis_elegans
ENSLBEG00000026281	ddx56	98	63.738	ENSCJAG00000012233	DDX56	98	63.670	Callithrix_jacchus
ENSLBEG00000026281	ddx56	82	62.187	ENSCAFG00000029295	DDX56	99	62.585	Canis_familiaris
ENSLBEG00000026281	ddx56	98	63.567	ENSCAFG00020019695	DDX56	98	63.378	Canis_lupus_dingo
ENSLBEG00000026281	ddx56	98	64.916	ENSCHIG00000014261	DDX56	98	64.540	Capra_hircus
ENSLBEG00000026281	ddx56	98	63.768	ENSTSYG00000008048	DDX56	98	63.858	Carlito_syrichta
ENSLBEG00000026281	ddx56	87	63.656	ENSCAPG00000006286	DDX56	98	63.362	Cavia_aperea
ENSLBEG00000026281	ddx56	98	64.299	ENSCPOG00000003359	DDX56	98	64.045	Cavia_porcellus
ENSLBEG00000026281	ddx56	98	62.734	ENSCCAG00000025303	DDX56	98	62.734	Cebus_capucinus
ENSLBEG00000026281	ddx56	98	63.415	ENSCATG00000039389	DDX56	98	63.415	Cercocebus_atys
ENSLBEG00000026281	ddx56	98	64.130	ENSCLAG00000007666	DDX56	98	63.977	Chinchilla_lanigera
ENSLBEG00000026281	ddx56	98	63.364	ENSCSAG00000015636	DDX56	98	63.296	Chlorocebus_sabaeus
ENSLBEG00000026281	ddx56	98	69.216	ENSCPBG00000024556	DDX56	97	69.189	Chrysemys_picta_bellii
ENSLBEG00000026281	ddx56	92	59.677	ENSCING00000005185	-	98	60.156	Ciona_intestinalis
ENSLBEG00000026281	ddx56	90	59.588	ENSCSAVG00000011266	-	99	59.245	Ciona_savignyi
ENSLBEG00000026281	ddx56	98	63.364	ENSCANG00000028187	DDX56	98	63.296	Colobus_angolensis_palliatus
ENSLBEG00000026281	ddx56	98	63.653	ENSCGRG00001019019	Ddx56	97	63.277	Cricetulus_griseus_chok1gshd
ENSLBEG00000026281	ddx56	98	63.653	ENSCGRG00000011870	Ddx56	97	63.277	Cricetulus_griseus_crigri
ENSLBEG00000026281	ddx56	100	82.469	ENSCSEG00000008368	ddx56	99	81.932	Cynoglossus_semilaevis
ENSLBEG00000026281	ddx56	100	83.184	ENSCVAG00000006499	ddx56	99	83.184	Cyprinodon_variegatus
ENSLBEG00000026281	ddx56	99	79.603	ENSDARG00000020913	ddx56	98	80.505	Danio_rerio
ENSLBEG00000026281	ddx56	87	61.864	ENSDNOG00000036526	DDX56	97	62.635	Dasypus_novemcinctus
ENSLBEG00000026281	ddx56	93	50.379	FBgn0001565	Hlc	93	50.189	Drosophila_melanogaster
ENSLBEG00000026281	ddx56	64	73.611	ENSETEG00000002969	-	64	73.611	Echinops_telfairi
ENSLBEG00000026281	ddx56	89	45.551	ENSETEG00000019559	-	99	45.339	Echinops_telfairi
ENSLBEG00000026281	ddx56	98	64.029	ENSEBUG00000009986	ddx56	99	64.029	Eptatretus_burgeri
ENSLBEG00000026281	ddx56	98	62.852	ENSEASG00005017795	DDX56	98	63.178	Equus_asinus_asinus
ENSLBEG00000026281	ddx56	98	62.664	ENSECAG00000019897	DDX56	98	62.991	Equus_caballus
ENSLBEG00000026281	ddx56	86	63.341	ENSEEUG00000004849	DDX56	98	62.370	Erinaceus_europaeus
ENSLBEG00000026281	ddx56	99	81.655	ENSELUG00000004150	ddx56	99	81.655	Esox_lucius
ENSLBEG00000026281	ddx56	98	62.921	ENSFCAG00000010261	DDX56	98	63.296	Felis_catus
ENSLBEG00000026281	ddx56	98	63.949	ENSFDAG00000007128	DDX56	98	64.299	Fukomys_damarensis
ENSLBEG00000026281	ddx56	100	80.501	ENSFHEG00000018008	ddx56	96	87.400	Fundulus_heteroclitus
ENSLBEG00000026281	ddx56	100	75.000	ENSGAFG00000006906	ddx56	99	75.000	Gambusia_affinis
ENSLBEG00000026281	ddx56	90	73.640	ENSGAGG00000006789	DDX56	93	70.398	Gopherus_agassizii
ENSLBEG00000026281	ddx56	98	63.738	ENSGGOG00000012031	DDX56	98	63.670	Gorilla_gorilla
ENSLBEG00000026281	ddx56	97	78.453	ENSHBUG00000015246	ddx56	97	78.269	Haplochromis_burtoni
ENSLBEG00000026281	ddx56	98	64.045	ENSHGLG00000017271	DDX56	98	63.790	Heterocephalus_glaber_female
ENSLBEG00000026281	ddx56	98	64.045	ENSHGLG00100015731	DDX56	98	63.790	Heterocephalus_glaber_male
ENSLBEG00000026281	ddx56	99	81.183	ENSHCOG00000001685	ddx56	99	80.645	Hippocampus_comes
ENSLBEG00000026281	ddx56	98	77.007	ENSIPUG00000006602	ddx56	96	76.642	Ictalurus_punctatus
ENSLBEG00000026281	ddx56	98	63.602	ENSSTOG00000000464	DDX56	98	63.602	Ictidomys_tridecemlineatus
ENSLBEG00000026281	ddx56	98	64.353	ENSJJAG00000014269	Ddx56	98	64.165	Jaculus_jaculus
ENSLBEG00000026281	ddx56	100	82.709	ENSKMAG00000016611	ddx56	99	83.244	Kryptolebias_marmoratus
ENSLBEG00000026281	ddx56	98	71.429	ENSLACG00000015551	DDX56	96	71.403	Latimeria_chalumnae
ENSLBEG00000026281	ddx56	100	76.292	ENSLOCG00000015185	ddx56	99	76.292	Lepisosteus_oculatus
ENSLBEG00000026281	ddx56	99	64.171	ENSLAFG00000018206	DDX56	99	63.636	Loxodonta_africana
ENSLBEG00000026281	ddx56	98	63.587	ENSMFAG00000041001	DDX56	98	63.415	Macaca_fascicularis
ENSLBEG00000026281	ddx56	99	63.016	ENSMMUG00000002645	DDX56	98	63.415	Macaca_mulatta
ENSLBEG00000026281	ddx56	98	63.602	ENSMNEG00000028492	DDX56	98	63.227	Macaca_nemestrina
ENSLBEG00000026281	ddx56	98	63.790	ENSMLEG00000043591	DDX56	98	63.790	Mandrillus_leucophaeus
ENSLBEG00000026281	ddx56	99	86.535	ENSMAMG00000007776	ddx56	99	86.535	Mastacembelus_armatus
ENSLBEG00000026281	ddx56	100	83.900	ENSMZEG00005009813	ddx56	99	83.721	Maylandia_zebra
ENSLBEG00000026281	ddx56	98	63.910	ENSMICG00000005550	DDX56	97	63.534	Microcebus_murinus
ENSLBEG00000026281	ddx56	98	62.862	ENSMOCG00000016782	Ddx56	98	62.289	Microtus_ochrogaster
ENSLBEG00000026281	ddx56	99	82.090	ENSMMOG00000009654	ddx56	95	88.845	Mola_mola
ENSLBEG00000026281	ddx56	98	58.736	ENSMODG00000016137	DDX56	97	58.659	Monodelphis_domestica
ENSLBEG00000026281	ddx56	69	78.049	ENSMALG00000016910	ddx56	99	78.125	Monopterus_albus
ENSLBEG00000026281	ddx56	98	62.477	MGP_CAROLIEiJ_G0016069	Ddx56	96	66.803	Mus_caroli
ENSLBEG00000026281	ddx56	98	62.664	ENSMUSG00000004393	Ddx56	96	67.213	Mus_musculus
ENSLBEG00000026281	ddx56	98	63.039	MGP_PahariEiJ_G0016822	Ddx56	97	66.803	Mus_pahari
ENSLBEG00000026281	ddx56	98	62.664	MGP_SPRETEiJ_G0016911	Ddx56	96	67.213	Mus_spretus
ENSLBEG00000026281	ddx56	98	63.109	ENSMPUG00000018196	DDX56	86	63.109	Mustela_putorius_furo
ENSLBEG00000026281	ddx56	99	61.786	ENSMLUG00000003509	DDX56	99	61.964	Myotis_lucifugus
ENSLBEG00000026281	ddx56	98	65.103	ENSNGAG00000018785	Ddx56	98	65.103	Nannospalax_galili
ENSLBEG00000026281	ddx56	96	79.104	ENSNBRG00000002656	ddx56	96	79.104	Neolamprologus_brichardi
ENSLBEG00000026281	ddx56	98	63.551	ENSNLEG00000003816	DDX56	98	63.483	Nomascus_leucogenys
ENSLBEG00000026281	ddx56	91	60.123	ENSMEUG00000006788	DDX56	99	60.123	Notamacropus_eugenii
ENSLBEG00000026281	ddx56	99	62.230	ENSOPRG00000000292	-	98	63.109	Ochotona_princeps
ENSLBEG00000026281	ddx56	68	66.304	ENSODEG00000014807	DDX56	98	66.304	Octodon_degus
ENSLBEG00000026281	ddx56	100	81.574	ENSONIG00000011509	ddx56	99	81.038	Oreochromis_niloticus
ENSLBEG00000026281	ddx56	51	64.684	ENSOANG00000010592	-	99	64.684	Ornithorhynchus_anatinus
ENSLBEG00000026281	ddx56	97	56.107	ENSOANG00000006320	-	99	56.192	Ornithorhynchus_anatinus
ENSLBEG00000026281	ddx56	74	56.140	ENSOANG00000015987	-	93	56.158	Ornithorhynchus_anatinus
ENSLBEG00000026281	ddx56	99	63.489	ENSOCUG00000022918	DDX56	98	64.232	Oryctolagus_cuniculus
ENSLBEG00000026281	ddx56	100	81.753	ENSORLG00000001434	ddx56	99	81.574	Oryzias_latipes
ENSLBEG00000026281	ddx56	100	81.395	ENSORLG00020015718	ddx56	96	81.216	Oryzias_latipes_hni
ENSLBEG00000026281	ddx56	100	81.753	ENSORLG00015003004	ddx56	95	81.574	Oryzias_latipes_hsok
ENSLBEG00000026281	ddx56	99	82.914	ENSOMEG00000022072	ddx56	99	82.734	Oryzias_melastigma
ENSLBEG00000026281	ddx56	98	64.299	ENSOGAG00000009981	DDX56	98	64.232	Otolemur_garnettii
ENSLBEG00000026281	ddx56	98	65.103	ENSOARG00000015240	DDX56	98	64.728	Ovis_aries
ENSLBEG00000026281	ddx56	98	53.383	ENSPPAG00000031263	-	97	52.642	Pan_paniscus
ENSLBEG00000026281	ddx56	98	61.029	ENSPPAG00000029147	DDX56	98	60.958	Pan_paniscus
ENSLBEG00000026281	ddx56	98	62.500	ENSPPRG00000014594	DDX56	98	62.873	Panthera_pardus
ENSLBEG00000026281	ddx56	96	55.288	ENSPTIG00000019500	DDX56	98	55.844	Panthera_tigris_altaica
ENSLBEG00000026281	ddx56	94	52.529	ENSPTRG00000052765	-	99	52.930	Pan_troglodytes
ENSLBEG00000026281	ddx56	98	63.738	ENSPTRG00000019147	DDX56	98	63.670	Pan_troglodytes
ENSLBEG00000026281	ddx56	98	63.357	ENSPANG00000002446	DDX56	98	63.227	Papio_anubis
ENSLBEG00000026281	ddx56	99	77.020	ENSPKIG00000018998	ddx56	98	76.302	Paramormyrops_kingsleyae
ENSLBEG00000026281	ddx56	96	85.448	ENSPMGG00000017421	ddx56	99	85.261	Periophthalmus_magnuspinnatus
ENSLBEG00000026281	ddx56	99	64.643	ENSPCIG00000009336	DDX56	98	64.286	Phascolarctos_cinereus
ENSLBEG00000026281	ddx56	100	82.826	ENSPFOG00000018658	ddx56	99	83.721	Poecilia_formosa
ENSLBEG00000026281	ddx56	100	83.005	ENSPLAG00000019208	ddx56	99	83.900	Poecilia_latipinna
ENSLBEG00000026281	ddx56	100	82.826	ENSPMEG00000001775	ddx56	99	83.721	Poecilia_mexicana
ENSLBEG00000026281	ddx56	100	83.542	ENSPREG00000015142	ddx56	99	83.542	Poecilia_reticulata
ENSLBEG00000026281	ddx56	98	63.738	ENSPPYG00000017591	DDX56	98	63.670	Pongo_abelii
ENSLBEG00000026281	ddx56	97	65.451	ENSPCAG00000011499	DDX56	99	65.451	Procavia_capensis
ENSLBEG00000026281	ddx56	98	63.858	ENSPCOG00000024864	DDX56	98	63.858	Propithecus_coquereli
ENSLBEG00000026281	ddx56	87	69.565	ENSPVAG00000000791	DDX56	85	69.565	Pteropus_vampyrus
ENSLBEG00000026281	ddx56	100	83.721	ENSPNYG00000019212	ddx56	99	83.542	Pundamilia_nyererei
ENSLBEG00000026281	ddx56	99	78.853	ENSPNAG00000025446	ddx56	99	79.032	Pygocentrus_nattereri
ENSLBEG00000026281	ddx56	98	63.227	ENSRNOG00000004670	Ddx56	98	63.039	Rattus_norvegicus
ENSLBEG00000026281	ddx56	98	63.551	ENSRBIG00000030140	DDX56	98	63.483	Rhinopithecus_bieti
ENSLBEG00000026281	ddx56	98	63.364	ENSRROG00000044428	DDX56	98	63.296	Rhinopithecus_roxellana
ENSLBEG00000026281	ddx56	98	43.363	YLR276C	-	91	45.120	Saccharomyces_cerevisiae
ENSLBEG00000026281	ddx56	99	62.657	ENSSBOG00000034339	DDX56	98	63.296	Saimiri_boliviensis_boliviensis
ENSLBEG00000026281	ddx56	86	66.017	ENSSHAG00000016615	DDX56	97	65.944	Sarcophilus_harrisii
ENSLBEG00000026281	ddx56	99	77.338	ENSSFOG00015012795	ddx56	98	77.158	Scleropages_formosus
ENSLBEG00000026281	ddx56	100	88.014	ENSSMAG00000011280	ddx56	99	89.366	Scophthalmus_maximus
ENSLBEG00000026281	ddx56	100	90.340	ENSSDUG00000023597	ddx56	99	90.340	Seriola_dumerili
ENSLBEG00000026281	ddx56	100	89.982	ENSSLDG00000018369	ddx56	99	89.982	Seriola_lalandi_dorsalis
ENSLBEG00000026281	ddx56	73	86.364	ENSSARG00000014363	DDX56	75	80.000	Sorex_araneus
ENSLBEG00000026281	ddx56	99	68.953	ENSSPUG00000000784	DDX56	95	68.525	Sphenodon_punctatus
ENSLBEG00000026281	ddx56	96	88.619	ENSSPAG00000009392	ddx56	99	88.806	Stegastes_partitus
ENSLBEG00000026281	ddx56	98	63.768	ENSSSCG00000016745	DDX56	98	63.406	Sus_scrofa
ENSLBEG00000026281	ddx56	100	84.547	ENSTRUG00000018623	ddx56	99	84.547	Takifugu_rubripes
ENSLBEG00000026281	ddx56	100	83.746	ENSTNIG00000013593	ddx56	99	83.746	Tetraodon_nigroviridis
ENSLBEG00000026281	ddx56	99	63.196	ENSTBEG00000007119	DDX56	98	63.415	Tupaia_belangeri
ENSLBEG00000026281	ddx56	85	64.615	ENSTTRG00000010552	DDX56	96	64.176	Tursiops_truncatus
ENSLBEG00000026281	ddx56	98	63.227	ENSUAMG00000014194	DDX56	98	63.483	Ursus_americanus
ENSLBEG00000026281	ddx56	98	63.359	ENSUMAG00000009666	DDX56	98	63.483	Ursus_maritimus
ENSLBEG00000026281	ddx56	99	61.913	ENSVVUG00000011905	DDX56	98	62.734	Vulpes_vulpes
ENSLBEG00000026281	ddx56	99	70.072	ENSXETG00000019000	ddx56	99	70.251	Xenopus_tropicalis
ENSLBEG00000026281	ddx56	99	81.749	ENSXCOG00000017413	ddx56	98	81.179	Xiphophorus_couchianus
ENSLBEG00000026281	ddx56	100	83.721	ENSXMAG00000018749	ddx56	99	83.721	Xiphophorus_maculatus