EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000026309 (Gene tree)
Gene ID: 109994534
Gene Symbol: si:ch211-153b23.4
Alias: fj08f03|fj10b02|im:7041150|wu:fj08f03|wu:fj10b02
Full Name: uncharacterized LOC109994534
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 5524 bases
Position: chrFKLU01000293.1:303716-309239
Accession: 109994534
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000035004	Sua5_yciO_yrdC	PF01300.18	3e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000036498	-	3951	XM_020647913	ENSLBEP00000035004	873 (aa)	XP_020503569	UPI0009B39793

Gene Model

Click here to download ENSLBEG00000026309's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000026309's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000026309	si:ch211-153b23.4	59	31.094	ENSLBEG00000026324	si:ch211-153b23.3	56	31.094

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000026309	si:ch211-153b23.4	100	81.486	ENSAPOG00000006178	si:ch211-153b23.4	99	81.143	Acanthochromis_polyacanthus
ENSLBEG00000026309	si:ch211-153b23.4	95	83.957	ENSAPOG00000006144	si:ch211-153b23.4	96	84.493	Acanthochromis_polyacanthus
ENSLBEG00000026309	si:ch211-153b23.4	51	44.910	ENSACIG00000006968	si:ch211-153b23.3	55	44.910	Amphilophus_citrinellus
ENSLBEG00000026309	si:ch211-153b23.4	96	83.848	ENSACIG00000006997	si:ch211-153b23.4	98	83.848	Amphilophus_citrinellus
ENSLBEG00000026309	si:ch211-153b23.4	58	30.962	ENSAOCG00000010974	si:ch211-153b23.3	58	30.962	Amphiprion_ocellaris
ENSLBEG00000026309	si:ch211-153b23.4	92	81.773	ENSAOCG00000010999	si:ch211-153b23.4	97	81.773	Amphiprion_ocellaris
ENSLBEG00000026309	si:ch211-153b23.4	97	82.311	ENSAPEG00000014665	si:ch211-153b23.4	99	82.311	Amphiprion_percula
ENSLBEG00000026309	si:ch211-153b23.4	58	30.368	ENSAPEG00000014700	si:ch211-153b23.3	58	30.368	Amphiprion_percula
ENSLBEG00000026309	si:ch211-153b23.4	100	84.800	ENSATEG00000004948	si:ch211-153b23.4	99	84.800	Anabas_testudineus
ENSLBEG00000026309	si:ch211-153b23.4	93	62.469	ENSAPLG00000013596	-	99	62.469	Anas_platyrhynchos
ENSLBEG00000026309	si:ch211-153b23.4	100	79.361	ENSACLG00000005471	si:ch211-153b23.4	99	79.361	Astatotilapia_calliptera
ENSLBEG00000026309	si:ch211-153b23.4	95	70.784	ENSAMXG00000013879	si:ch211-153b23.4	99	70.671	Astyanax_mexicanus
ENSLBEG00000026309	si:ch211-153b23.4	96	79.953	ENSCSEG00000014838	si:ch211-153b23.4	100	79.953	Cynoglossus_semilaevis
ENSLBEG00000026309	si:ch211-153b23.4	93	82.942	ENSCVAG00000021145	si:ch211-153b23.4	100	82.942	Cyprinodon_variegatus
ENSLBEG00000026309	si:ch211-153b23.4	100	68.607	ENSDARG00000077169	si:ch211-153b23.4	99	68.607	Danio_rerio
ENSLBEG00000026309	si:ch211-153b23.4	98	70.983	ENSELUG00000004961	si:ch211-153b23.4	97	70.983	Esox_lucius
ENSLBEG00000026309	si:ch211-153b23.4	99	55.454	ENSFALG00000011343	-	99	55.454	Ficedula_albicollis
ENSLBEG00000026309	si:ch211-153b23.4	92	82.625	ENSFHEG00000010001	si:ch211-153b23.4	99	82.625	Fundulus_heteroclitus
ENSLBEG00000026309	si:ch211-153b23.4	86	79.835	ENSFHEG00000009888	si:ch211-153b23.4	83	79.835	Fundulus_heteroclitus
ENSLBEG00000026309	si:ch211-153b23.4	58	31.538	ENSFHEG00000010030	si:ch211-153b23.3	58	31.538	Fundulus_heteroclitus
ENSLBEG00000026309	si:ch211-153b23.4	89	81.654	ENSGAFG00000007442	si:ch211-153b23.4	93	81.654	Gambusia_affinis
ENSLBEG00000026309	si:ch211-153b23.4	59	32.190	ENSGAFG00000007455	si:ch211-153b23.3	59	32.190	Gambusia_affinis
ENSLBEG00000026309	si:ch211-153b23.4	96	83.452	ENSGACG00000018253	si:ch211-153b23.4	99	83.452	Gasterosteus_aculeatus
ENSLBEG00000026309	si:ch211-153b23.4	79	64.562	ENSGAGG00000024601	-	93	64.562	Gopherus_agassizii
ENSLBEG00000026309	si:ch211-153b23.4	77	81.129	ENSHBUG00000000013	si:ch211-153b23.4	89	81.129	Haplochromis_burtoni
ENSLBEG00000026309	si:ch211-153b23.4	95	70.778	ENSIPUG00000015205	si:ch211-153b23.4	99	70.778	Ictalurus_punctatus
ENSLBEG00000026309	si:ch211-153b23.4	93	85.276	ENSKMAG00000006829	si:ch211-153b23.4	100	85.276	Kryptolebias_marmoratus
ENSLBEG00000026309	si:ch211-153b23.4	100	82.857	ENSKMAG00000006919	-	99	82.857	Kryptolebias_marmoratus
ENSLBEG00000026309	si:ch211-153b23.4	75	30.014	ENSLACG00000005800	-	82	30.014	Latimeria_chalumnae
ENSLBEG00000026309	si:ch211-153b23.4	94	64.010	ENSLACG00000017592	si:ch211-153b23.4	99	64.010	Latimeria_chalumnae
ENSLBEG00000026309	si:ch211-153b23.4	94	88.278	ENSMAMG00000009358	si:ch211-153b23.4	100	88.278	Mastacembelus_armatus
ENSLBEG00000026309	si:ch211-153b23.4	94	87.713	ENSMAMG00000009277	si:ch211-153b23.4	99	87.713	Mastacembelus_armatus
ENSLBEG00000026309	si:ch211-153b23.4	94	80.755	ENSMZEG00005011433	si:ch211-153b23.4	100	80.755	Maylandia_zebra
ENSLBEG00000026309	si:ch211-153b23.4	93	61.689	ENSMGAG00000005478	-	99	61.689	Meleagris_gallopavo
ENSLBEG00000026309	si:ch211-153b23.4	93	84.425	ENSMMOG00000004425	si:ch211-153b23.4	100	84.425	Mola_mola
ENSLBEG00000026309	si:ch211-153b23.4	91	80.803	ENSNBRG00000013392	si:ch211-153b23.4	100	80.803	Neolamprologus_brichardi
ENSLBEG00000026309	si:ch211-153b23.4	100	79.086	ENSONIG00000017875	si:ch211-153b23.4	100	79.086	Oreochromis_niloticus
ENSLBEG00000026309	si:ch211-153b23.4	99	79.748	ENSORLG00000006169	si:ch211-153b23.4	99	79.748	Oryzias_latipes
ENSLBEG00000026309	si:ch211-153b23.4	99	79.863	ENSORLG00020009905	si:ch211-153b23.4	99	79.863	Oryzias_latipes_hni
ENSLBEG00000026309	si:ch211-153b23.4	99	79.748	ENSORLG00015003709	si:ch211-153b23.4	99	79.748	Oryzias_latipes_hsok
ENSLBEG00000026309	si:ch211-153b23.4	97	80.588	ENSOMEG00000007682	si:ch211-153b23.4	99	79.931	Oryzias_melastigma
ENSLBEG00000026309	si:ch211-153b23.4	58	32.948	ENSOMEG00000007661	si:ch211-153b23.3	59	32.948	Oryzias_melastigma
ENSLBEG00000026309	si:ch211-153b23.4	95	69.119	ENSPKIG00000014429	si:ch211-153b23.4	96	68.974	Paramormyrops_kingsleyae
ENSLBEG00000026309	si:ch211-153b23.4	98	69.499	ENSPKIG00000025681	si:ch211-153b23.4	99	69.499	Paramormyrops_kingsleyae
ENSLBEG00000026309	si:ch211-153b23.4	95	65.468	ENSPMGG00000001313	si:ch211-153b23.4	91	65.770	Periophthalmus_magnuspinnatus
ENSLBEG00000026309	si:ch211-153b23.4	59	32.955	ENSPFOG00000012289	si:ch211-153b23.3	59	32.955	Poecilia_formosa
ENSLBEG00000026309	si:ch211-153b23.4	78	83.382	ENSPFOG00000012164	si:ch211-153b23.4	95	83.628	Poecilia_formosa
ENSLBEG00000026309	si:ch211-153b23.4	59	32.386	ENSPLAG00000016320	si:ch211-153b23.3	59	32.386	Poecilia_latipinna
ENSLBEG00000026309	si:ch211-153b23.4	92	81.592	ENSPLAG00000016295	si:ch211-153b23.4	99	81.592	Poecilia_latipinna
ENSLBEG00000026309	si:ch211-153b23.4	94	77.427	ENSPMEG00000007538	si:ch211-153b23.4	99	77.427	Poecilia_mexicana
ENSLBEG00000026309	si:ch211-153b23.4	59	32.264	ENSPMEG00000008884	si:ch211-153b23.3	59	32.264	Poecilia_mexicana
ENSLBEG00000026309	si:ch211-153b23.4	94	80.512	ENSPNYG00000000250	si:ch211-153b23.4	100	80.512	Pundamilia_nyererei
ENSLBEG00000026309	si:ch211-153b23.4	99	71.167	ENSPNAG00000019554	si:ch211-153b23.4	99	71.167	Pygocentrus_nattereri
ENSLBEG00000026309	si:ch211-153b23.4	99	71.611	ENSSFOG00015010891	si:ch211-153b23.4	99	71.611	Scleropages_formosus
ENSLBEG00000026309	si:ch211-153b23.4	99	67.617	ENSSFOG00015003920	-	99	67.617	Scleropages_formosus
ENSLBEG00000026309	si:ch211-153b23.4	100	83.638	ENSSMAG00000010067	si:ch211-153b23.4	100	83.638	Scophthalmus_maximus
ENSLBEG00000026309	si:ch211-153b23.4	77	83.631	ENSSDUG00000006931	si:ch211-153b23.4	92	83.631	Seriola_dumerili
ENSLBEG00000026309	si:ch211-153b23.4	84	81.090	ENSSDUG00000006842	si:ch211-153b23.4	93	81.090	Seriola_dumerili
ENSLBEG00000026309	si:ch211-153b23.4	93	84.920	ENSSDUG00000006671	si:ch211-153b23.4	100	85.043	Seriola_dumerili
ENSLBEG00000026309	si:ch211-153b23.4	93	61.538	ENSTGUG00000005499	-	99	61.538	Taeniopygia_guttata
ENSLBEG00000026309	si:ch211-153b23.4	92	82.447	ENSTRUG00000003247	si:ch211-153b23.4	100	82.447	Takifugu_rubripes
ENSLBEG00000026309	si:ch211-153b23.4	94	79.976	ENSTNIG00000008958	si:ch211-153b23.4	99	79.976	Tetraodon_nigroviridis
ENSLBEG00000026309	si:ch211-153b23.4	98	55.946	ENSXETG00000004489	-	96	55.946	Xenopus_tropicalis
ENSLBEG00000026309	si:ch211-153b23.4	95	81.588	ENSXMAG00000021388	si:ch211-153b23.4	99	81.588	Xiphophorus_maculatus
ENSLBEG00000026309	si:ch211-153b23.4	58	32.143	ENSXMAG00000029318	si:ch211-153b23.3	59	32.156	Xiphophorus_maculatus
ENSLBEG00000026309	si:ch211-153b23.4	97	80.000	ENSXMAG00000009416	-	100	80.000	Xiphophorus_maculatus